CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.217e-25
Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS-VMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSL 328
            L YLH+ A   I HRD+K+ NILLD+K+ AKVSDFG S++   +D TH++T V+G+FGY+DPEYF+  Q TEKSDVYSFGVVL E L  +  +      E  SL
Sbjct:  646 LHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSL 749          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.204e-24
Identity = 52/100 (52.00%), Postives = 76/100 (76.00%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV--DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            +E +  L YLH+     + HRD+KS NILLD++++AK++DFG SRS  V  DQ+ ++T V GT GY+DPEY+ +S+ +EKSDVYSFG++L+EI+T Q+ I
Sbjct:  670 IEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVI 769          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.572e-24
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-----QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            + YLH+ A  PI HRDIK +NILLD K   KV+DFG S+ + +D     + H+TT V+GT GYVDPEY+ S + TEKSDVYS G+V +EILTG +PI
Sbjct:  740 ILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPI 836          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.572e-24
Identity = 52/110 (47.27%), Postives = 77/110 (70.00%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV 331
            V  +  L YLH  +S+ I HRDIK++NILLD K +AK++DFG +RS   D++H++T + GT GY+ PEY    Q TE  DVYSFGV+++EI+TG++  ++  +D   SL+
Sbjct:  429 VGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLI 538          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.053e-24
Identity = 53/96 (55.21%), Postives = 76/96 (79.17%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQ 286
            VE +  L YLH+  + P+ HRD+K+ NILL+++Y AK++DFG SRS  VD ++H++T V GT GY+DPEY++++  +EKSDVYSFGVVL+EI+T Q
Sbjct:  669 VEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ 764          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.053e-24
Identity = 55/115 (47.83%), Postives = 75/115 (65.22%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENR 364
            L YLH +    I HRDIKS+NILL D + A ++DFG +R ++   TH+TT + GT GY+ PEY Q+S  T K DVYSFGVVL+E+LTG++P+        + L+ + LQ   E R
Sbjct:  854 LAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKR 968          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.053e-24
Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTK-VQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            L +LH +    I HRD+KS+N+LLD+ + A+VSDFG +R V    THL+   + GT GYV PEY+QS + T K DVYS+GV+L+E+L+G+KPI      ED +LVG+  Q   E R  E L
Sbjct:  972 LAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQLYREKRGAEIL 1092          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.682e-24
Identity = 56/116 (48.28%), Postives = 81/116 (69.83%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDED-KSLVGYFL 343
            VE +  L YLH+    P+ HRD+K+ NILLD+ ++AK++DFG SRS  V  +TH++T V GT GY+DPEY+++++  EKSDVYSFG+VL+EI+T +  I+         + VGY L
Sbjct:  677 VETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTREKPHIAAWVGYML 792          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 2.682e-24
Identity = 54/98 (55.10%), Postives = 72/98 (73.47%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT------HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            + YLH+ A+ PI+HRDIK++NILLD ++ AKV+DFG SR   V         H++T V+GT GY+DPEYF + Q T+KSDVYS GVVL+E+ TG +PI
Sbjct:  734 ILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPI 831          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.502e-24
Identity = 55/109 (50.46%), Postives = 73/109 (66.97%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQ 346
            L YLH+  +  I HRD+KS NILLD+   AKV+DFG S+ V   Q H++T V+G+FGY+DPEYF+  Q T+KSDVYSFGVVL+E L  +  I      E  +L  + +Q
Sbjct:  635 LHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQ 743          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
FERON_ARATH9.217e-2554.81Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
MEE39_ARATH1.204e-2452.00Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH1.572e-2456.70Probable LRR receptor-like serine/threonine-protei... [more]
CRK2_ARATH1.572e-2447.27Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
Y5188_ARATH2.053e-2455.21Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA2.053e-2447.83Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
BRL1_ARATH2.053e-2448.76Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y2289_ARATH2.682e-2448.28Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH2.682e-2455.10Probable LRR receptor-like serine/threonine-protei... [more]
Y4391_ARATH3.502e-2450.46Probable receptor-like protein kinase At4g39110 OS... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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