CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.502e-24
Identity = 54/127 (42.52%), Postives = 83/127 (65.35%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRA-INTDEDKSLVGYFLQAINENRLFEAL 379
            V  +  L +LH      I HRDIK++NILLD  +  KV+DFG +R +   ++H++T + GTFGY+ PEY QS++ T K DVYSFGV+L+E++TG++P        E  +LVG+ +Q IN+ +  + +
Sbjct: 1022 VGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVI 1148          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.574e-24
Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV-DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVG 334
            E +  L YLH     P+ HRDIKS NILLD+ ++AK+ DFG SRS  V  +TH++T V G+ GY+DPEY++++  TEKSDV+SFGVVL+EI+T Q     I+   +KS +G
Sbjct:  696 ETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQP---VIDQTREKSHIG 803          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.974e-24
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR--SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIR 298
            L YLH+ A   I HRDIK+ NILLD+ + AKVSDFG SR       QTH++T V+GTFGY+DPEY++    TEKSDVYSFGVVL+E+L   +PIR
Sbjct:  638 LQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLC-CRPIR 731          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.974e-24
Identity = 54/103 (52.43%), Postives = 76/103 (73.79%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMV-DQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAIN 307
            VE +  L YLHS     + HRD+KS NILLD+ ++AK++DFG SRS  V +++H++T V GT GY+DPEY+++ + TEKSDVYSFG+VL+EI+T Q  +   N
Sbjct:  677 VETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQAN 779          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.974e-24
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTK-VQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            L +LH +    I HRD+KS+N+LLD  + A+VSDFG +R V    THL+   + GT GYV PEY+QS + T K DVYS+GV+L+E+L+G+KPI      ED +LVG+  Q   E R  E L
Sbjct:  970 LAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQLYREKRGAEIL 1090          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 7.803e-24
Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ-THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGY 337
            ++ +  L YLH     PI HRD+K+ANILL+D   AK++DFG S+    D  +H+ T V GT GYVDPEY+ + +  EKSDVYSFG+VL+E++TG++ I   +  E  ++V Y
Sbjct:  683 IDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHY 795          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.803e-24
Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            L YLH+  +  I HRD+KS NILLD+   AKV+DFG S+ V   Q H++T V+G+FGY+DPEYF+  Q T+KSDVYSFGVVL+E L  +  I
Sbjct:  634 LHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAI 725          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.803e-24
Identity = 53/118 (44.92%), Postives = 80/118 (67.80%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR-SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLF 370
            L YLH   + P+ +RD+K +NILL + Y+ K+SDFG ++     D+TH++T+V GT+GY  P+Y  + Q T KSD+YSFGVVL+E++TG+K I    T +D++LVG+      + R F
Sbjct:  215 LEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNF 332          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.803e-24
Identity = 53/118 (44.92%), Postives = 79/118 (66.95%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 373
            L YLH   S  I HRD+KS+NILLD    A+++DFG ++S+ V ++H +T V GT GY+DPEY ++S+ TEKSDVYS+G+VL+E+LT +K +     D++ +L    +     N + E
Sbjct:  758 LAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAV-----DDESNLHHLIMSKTGNNEVME 870          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.019e-23
Identity = 51/120 (42.50%), Postives = 77/120 (64.17%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            L YLH      + HRDIKS+NILLD ++ AKVSDFG ++ +  + +++TT+V GTFGYV PEY  +    EKSD+YSFG++++EI+TG+ P+       + +LV +    +   R  E +
Sbjct:  265 LAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVV 384          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
EXS_ARATH3.502e-2442.52Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y4245_ARATH4.574e-2451.35Probable LRR receptor-like serine/threonine-protei... [more]
Y5389_ARATH5.974e-2460.00Probable receptor-like protein kinase At5g38990 OS... [more]
Y5169_ARATH5.974e-2452.43Probable LRR receptor-like serine/threonine-protei... [more]
BRL3_ARATH5.974e-2448.76Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y4291_ARATH7.803e-2446.90Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH7.803e-2456.52Probable receptor-like protein kinase At2g21480 OS... [more]
RLCK7_ARATH7.803e-2444.92Probable serine/threonine-protein kinase RLCKVII O... [more]
ERECT_ARATH7.803e-2444.92LRR receptor-like serine/threonine-protein kinase ... [more]
Y1154_ARATH1.019e-2342.50Probable serine/threonine-protein kinase At1g01540... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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