CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.331e-23
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR--SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIR 298
            L YLH+ A   I HRDIK+ NILLD+ +  KVSDFG SR       QTH++T V+GTFGY+DPEY++    TEKSDVYSFGVVL+E+L   +PIR
Sbjct:  631 LQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLC-CRPIR 724          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.331e-23
Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS-VMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSL 328
            L YLH+ A   I HRD+K+ NILLD+ + AKVSDFG S++   ++  H+TT V+G+FGY+DPEYF+  Q TEKSDVYSFGVVL E+L  +  +    + E  SL
Sbjct:  630 LHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVSL 733          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.738e-23
Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 2
Query:    5 EVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            E +  L YLH   + P+ HRD+K+ NILLD+ Y+AK++DFG SRS  V  ++H++T + GT GY+DPEY+ +S+ +EKSDVYSFG+VL+E++T Q  I
Sbjct:  685 EAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVI 782          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.270e-23
Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDED 319
            L YLH  A   I HRDIK++NILLD+++ AKV+DFG ++      TH++T+V GT GYV PEY    Q TEKSDVYSFGVVL+E+L+ +K   AI TDE+
Sbjct:  397 LAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRK---AIVTDEE 493          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.270e-23
Identity = 51/109 (46.79%), Postives = 73/109 (66.97%), Query Frame = 2
Query:   11 SGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGY 337
            S  L Y+H      I HRDIKS+NILLD  ++A V+DFG SR ++  +TH+TT++ GT GY+ PEY Q+   T + DVYSFGVV++E+LTG++P+        + LV +
Sbjct:  911 SSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRPKMSRELVAW 1019          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.965e-23
Identity = 55/120 (45.83%), Postives = 77/120 (64.17%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQ---THLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAI 352
            ++ +  + YLH     P+ HRDIKS+NILLD  + AKVSDFG S+    ++   +HL+    GT GY+DPEY++  Q T KSDVYSFGVVL+E+L+G K I     +  ++LV Y +  I
Sbjct:  558 LDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYI 677          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.872e-23
Identity = 51/112 (45.54%), Postives = 80/112 (71.43%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVG 334
            +E +  L YLH+    P+ HRD+K+ NILL++ + AK++DFG SRS +++ +TH++T V GT GY+DPEY +++  TEKSDVYSFG++L+EI+T +     I+   +K  +G
Sbjct:  682 IESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNR---HVIDQSREKPHIG 790          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.872e-23
Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            ++V+  L YLH      IYHRDIK  NILLD   RA+V+DFG ++     ++HLTT+V GT GY+ PEY    Q TEKSDVYSFGVV++EI+ G+K +
Sbjct:  405 LDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKAL 502          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.872e-23
Identity = 51/106 (48.11%), Postives = 75/106 (70.75%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQT-HLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDE 316
            ++ +  L YLH+    PI HRD+K  NILL++K +AK++DFG SRS  V+ +  ++T V G+ GY+DPEY+ + Q  EKSDVYS GVVL+E++TGQ  I +  T++
Sbjct:  676 LDAAQGLEYLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPAIASSKTEK 781          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.872e-23
Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS-VMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSL 328
            L YLH+ A   I HRD+K+ NIL+D+ + AKVSDFG S++   ++  H+TT V+G+FGY+DPEYF+  Q TEKSDVYSFGVVL EIL  +  +      E  SL
Sbjct:  626 LHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVSL 729          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
Y5900_ARATH1.331e-2358.95Putative receptor-like protein kinase At5g39000 OS... [more]
ANX2_ARATH1.331e-2352.88Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y5596_ARATH1.738e-2352.04Probable LRR receptor-like serine/threonine-protei... [more]
RKF3_ARATH2.270e-2356.00Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH2.270e-2346.79Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
ACCR4_ARATH2.965e-2345.83Serine/threonine-protein kinase-like protein CCR4 ... [more]
Y5182_ARATH3.872e-2345.54Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH3.872e-2353.06Probable receptor-like protein kinase At1g11050 OS... [more]
SIRK_ARATH3.872e-2348.11Senescence-induced receptor-like serine/threonine-... [more]
ANX1_ARATH3.872e-2352.88Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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