CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.058e-23
Identity = 52/96 (54.17%), Postives = 73/96 (76.04%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQ 286
            VE +  L YLH+    P+ HRD+K  NILL+++ +AK++DFG SRS  VD ++H+ T V GT GY+DPEY++++  +EKSDVYSFGVVL+EI+T Q
Sbjct:  673 VEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ 768          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.605e-23
Identity = 52/99 (52.53%), Postives = 74/99 (74.75%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            VE +  L YLH+    P+ HRD+K+ NILL+++  AK++DFG SRS  +D + H++T V GT GY+DPEY++++  +EKSDVYSFGVVL+EI+T Q  I
Sbjct:  687 VEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVI 785          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.605e-23
Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            L YLH      + HRD+KS+NILLD+K+ A ++DFG +R +    TH+TT + GT GY+ PEY QS   T + DVYSFGVVL+E++TG++P+        + LV    Q   E R  E +
Sbjct:  865 LAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAELI 984          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.627e-23
Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRS-VMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            L YLH+ +   I HRD+K+ NILLD+ + AK+SDFG S++   +D TH++T V+G+FGY+DPEYF+  Q TEKSDVYSFGVVL E +  +  I
Sbjct:  629 LHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVI 721          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.627e-23
Identity = 50/96 (52.08%), Postives = 72/96 (75.00%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQ 286
            VE +  L YLH+    P+ HRD+K+ NILL++   AK++DFG SRS  ++ +TH++T V GT GY+DPEY++++   EKSDVYSFG+VL+EI+T Q
Sbjct:  696 VESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQ 791          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 105.531 bits (262), Expect = 8.627e-23
Identity = 51/118 (43.22%), Postives = 77/118 (65.25%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFE 373
            L YLH      I HRDIKS+NILLD+ + + ++DFG +R +   +TH++T + GT GY+ PEY Q+S  T K DVYSFGVVL+E+LT ++P+        + L+ + ++  +E+R  E
Sbjct:  845 LLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASE 962          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.127e-22
Identity = 52/118 (44.07%), Postives = 79/118 (66.95%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSR-SVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLF 370
            L +LH  A+ P+ +RD KS+NILLD+ +  K+SDFG ++     D++H++T+V GT+GY  PEY  + Q T KSDVYSFGVV +E++TG+K I +     +++LV +     N+ R F
Sbjct:  198 LEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKF 315          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.472e-22
Identity = 48/98 (48.98%), Postives = 72/98 (73.47%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            ++V+ AL YLH   S  + HRDIK +NILLD+ Y A +SDFG S+ +   Q+H+TT V GTFGYV PEY  + + +EK+DVYS+G+VL+E+++ ++ +
Sbjct:  364 LDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRAL 461          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.472e-22
Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAI----NENRLFEAL 379
            L YLH  + + I HRDIK++N+LLDD+   K++DFG +R   +D+THL+T + GT GY+ PEY    Q TEK+DVYSFGV+++EI  G + I A   +      G+ LQ +      NRL EAL
Sbjct:  425 LAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTR-INAFVPE-----TGHLLQRVWNLYTLNRLVEAL 542          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.278e-22
Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 2
Query:   26 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            YLH+     I HRD+KS NILL +++ AK++DFG SRS ++      T V GTFGY+DPEY ++S  + KSDVYSFGVVL+EI++GQ  I
Sbjct:  671 YLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVI 760          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
Y5189_ARATH5.058e-2354.17Probable LRR receptor-like protein kinase At1g5189... [more]
Y1518_ARATH6.605e-2352.53Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH6.605e-2344.17Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y1357_ARATH8.627e-2354.84Probable receptor-like protein kinase At1g30570 OS... [more]
RLK6_ARATH8.627e-2352.08Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
PSKR1_ARATH8.627e-2343.22Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
PBS1_ARATH1.127e-2244.07Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
RPK1_ARATH1.472e-2248.98Probable LRR receptor-like serine/threonine-protei... [more]
CRK42_ARATH1.472e-2245.97Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
Y1755_ARATH3.278e-2254.44Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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