CX296823

Overview
NameCX296823
Unique NameCX296823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length381
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 5.592e-22
Identity = 49/95 (51.58%), Postives = 68/95 (71.58%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTT-KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQK 289
            V+  + YLH  + + I HRD+K+ NILLD     K++DFG +R+  VDQT  TT +V GTFGY+ PEY  + QF+ KSDVYSFGV+++EI+ G+K
Sbjct:  441 VTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKK 535          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 7.303e-22
Identity = 47/118 (39.83%), Postives = 79/118 (66.95%), Query Frame = 2
Query:   20 LFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQK--PIRAINTDEDKSLVGYFLQAINENRL 367
            L YLH      I HRD+K+ANILLD+++ A V DFG ++ +  + +H+TT V+GT G++ PEY  + + +EK+DV+ +GV+L+E++TGQK   +  +  D+D  L+ +  + + E +L
Sbjct:  406 LAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKL 523          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 7.303e-22
Identity = 47/96 (48.96%), Postives = 66/96 (68.75%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQK 289
            + +S  L YLH  + + I HRDIK++NILLD     K++DFG  RS+  D+T   T + GT GY+ PEY    Q TEK+DVY+FGV+++EI+TG+K
Sbjct:  422 IGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKK 517          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.538e-22
Identity = 50/104 (48.08%), Postives = 75/104 (72.12%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINT 310
            ++ +  L YLH     PI HRD+K++NILL++K RAK++DFG SRS   + ++H++T V GT GY+DP  F+++   EKSD+YSFGVVL+E++TG+  I+   T
Sbjct:  672 LDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQT 775          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.538e-22
Identity = 49/109 (44.95%), Postives = 75/109 (68.81%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHL-TTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLV 331
            ++  + YLH  + + I HRD+K++NILLD     K++DFG +R   +DQT   T+++ GT+GY+ PEY    QF+ KSDVYSFGV+++EI++G+K    I TD+ + LV
Sbjct:  442 IARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDDAQDLV 550          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.538e-22
Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 2
Query:    8 VSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTT-KVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDED-KSLVGYFLQAINENRLFE 373
            ++  + YLH  + + I HRD+K+ NILLD     K+ DFG +R+  VDQT  TT +V GT GY+ PEY  + QF+ KSDVYSFGV+++EI+ G+K      TD    +LV Y  +  N   L E
Sbjct:  418 ITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKKNSSINETDGSISNLVTYVWRLWNNEPLLE 541          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.246e-21
Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTH-LTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQK 289
            V VS  L YLH  +  PI HRD+KS+N+LLD++   K+SDFG +R    D T  +T +V GT+GY+ PEY    +F+ K+DVYSFGV+++EI+TG++
Sbjct:  437 VGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKR 533          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.627e-21
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTD 313
            +E +  L YLH   + P+ HRD+K+ANILLD+ ++AK++DFG SRS   + ++  +T + GT GY+DPE + S +  EKSDVYSFG+VL+E++T Q  I   + D
Sbjct:  668 LEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQTSGD 772          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.125e-21
Identity = 48/99 (48.48%), Postives = 72/99 (72.73%), Query Frame = 2
Query:    2 VEVSGALFYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVD-QTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPI 295
            +E +  L YLH+     + HRD+K+ NILL++ +  K++DFG SRS  ++ +TH++T V GT GY+DPEY++++  TEKSDVYSFGVVL+ ++T Q  I
Sbjct:  681 LEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVI 779          
BLAST of CX296823 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.125e-21
Identity = 54/121 (44.63%), Postives = 80/121 (66.12%), Query Frame = 2
Query:   20 LFYLHSAASI-PIYHRDIKSANILLDDKYRAKVSDFGTSRSVMVDQTHLTTKVQGTFGYVDPEYFQSSQFTEKSDVYSFGVVLVEILTGQKPIRAINTDEDKSLVGYFLQAINENRLFEAL 379
            L YLHS+ S   I HRD+KS NILLD+   AKV+DFG S+    D+++++  ++GTFGY+DPEY Q+ + TEKSDVY+FGVVL+E+L  +  I      E+ +L  + +   ++  + E L
Sbjct:  597 LDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEIL 717          
The following BLAST results are available for this feature:
BLAST of CX296823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
CRK16_ARATH5.592e-2251.58Putative cysteine-rich receptor-like protein kinas... [more]
SERK4_ARATH7.303e-2239.83Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK1_ARATH7.303e-2248.96Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
Y1570_ARATH9.538e-2248.08Probable LRR receptor-like serine/threonine-protei... [more]
CRK7_ARATH9.538e-2244.95Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK24_ARATH9.538e-2244.35Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK27_ARATH1.246e-2149.48Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
RLK7_ARATH1.627e-2146.67Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
Y5181_ARATH2.125e-2148.48Probable LRR receptor-like serine/threonine-protei... [more]
Y2232_ARATH2.125e-2144.63Probable receptor-like protein kinase At2g23200 OS... [more]

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Properties
Property NameValue
Genbank descriptionC05803C02SK FerrChloL1 Citrus clementina cDNA clone C05803C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296823 ID=CX296823; Name=CX296823; organism=Citrus clementina; type=EST; length=381bp
TGTAGAAGTTTCAGGTGCTCTTTTCTACTTGCATTCAGCTGCTTCCATCC
CTATTTATCATCGAGACATCAAGTCCGCAAACATACTTTTGGACGATAAA
TATCGAGCCAAAGTTTCGGATTTTGGAACTTCAAGATCTGTTATGGTTGA
TCAAACTCATTTGACCACAAAAGTTCAAGGAACTTTTGGATACGTAGATC
CAGAGTATTTTCAGTCAAGTCAATTCACTGAAAAAAGTGATGTTTATAGT
TTTGGAGTAGTTCTTGTTGAGATTTTAACTGGACAGAAACCTATTCGTGC
AATCAACACTGATGAAGACAAAAGTTTAGTGGGATATTTTCTCCAAGCAA
TTAACGAGAACCGTTTGTTTGAAGCCCTTGA
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