CX296825

Overview
NameCX296825
Unique NameCX296825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.194e-32
Identity = 78/221 (35.29%), Postives = 120/221 (54.30%), Query Frame = 1
Query:   13 EFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRL-ILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEKPK 672
            EF+ EV   ++ QH NL+ +LG+C    + +LIY YM   SLDY+L + +     LDWK R               +     I+HRD+K SNILL +     ++DFGLAR+ +  D    T+ +VGT GYIPPEY    V + K DVYSFGV+ L++++GRR         +  L+ +  ++  + +  E+ D  + D   + ++L  L++A  C+ E PK
Sbjct:  783 EFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTD-LVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPK 1002          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.784e-32
Identity = 77/225 (34.22%), Postives = 122/225 (54.22%), Query Frame = 1
Query:    1 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRR--LILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEKP 669
            QG  EF  E+    +L+H NL+ + G+C    + +LIY+Y+P  SLD  L+   R+  ++L W  R               E     +IHRD+K SN+L+++D+ P++ DFGLAR++ +   ++NT  +VGT GY+ PE    G  S+ SDV++FGVL L+I+SGR    R   +    L ++  EL   G+ +  +D  L   +   +    L V LLC  ++P
Sbjct:  399 QGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGS-QSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGR----RPTDSGTFFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRP 618          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.511e-31
Identity = 82/222 (36.94%), Postives = 128/222 (57.66%), Query Frame = 1
Query:    1 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRL-ILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEAN-TNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNEN-LSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCV 657
            Q  +EF+ EV     ++H NL+R+LG+CI+    ML+YEY+   +L+ +L   +R+   L W+ R               E     ++HRD+K SNIL+D++   K+SDFGLA++   D  E++ T R++GT GY+ PEY   G+ + KSD+YSFGVL L+ I+GR   + YG+  N ++LVE+   +    +  E++D  L+   S   L   L V+L CV
Sbjct:  219 QAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLL--DSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDP-VDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCV 437          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.511e-31
Identity = 77/226 (34.07%), Postives = 119/226 (52.65%), Query Frame = 1
Query:    1 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRR--LILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEKPK 672
            QG  EF  E+    +L+H NL+ + G+C    + +LIY+Y+P  SLD  L+   RR   +L W  R               E     +IHRD+K SN+L+D D+ P++ DFGLAR++ +   ++ T  +VGT GY+ PE    G  S+ SDV++FGVL L+I+SGR    +   +    + ++  EL   G+ +  +D  L   +   +    L V LLC   KP+
Sbjct:  400 QGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGS-QSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGR----KPTDSGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPE 620          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.974e-31
Identity = 79/225 (35.11%), Postives = 119/225 (52.89%), Query Frame = 1
Query:    1 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRR--LILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEKP 669
            QG  EF  E+    KL+H NL+ + G+C    + +LIY+Y+P  SLD  L+   RR   +L W  R               E     +IHRD+K SN+L+D  + P++ DFGLAR++ +  L + T  +VGT GY+ PE    G  S+ SDV++FGVL L+I+ GR    +   +    LV++  EL  +G+ +  +D  L   +   +    L V LLC  +KP
Sbjct:  403 QGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTL-SETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGR----KPTDSGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKP 622          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.578e-31
Identity = 80/219 (36.53%), Postives = 117/219 (53.42%), Query Frame = 1
Query:    4 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDP-IRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCV 657
            G + F NEV L ++++H NL+   GFC + +  +L+YEY+   SL   L+ P  +R  L+W  R                 S   IIHRD+K SNILLD+D+  K+SDFGL++ F K D    T  + GT GY+ PEY      + KSDVYSFGV+ L++I GR      G  ++ +LV +A    + G   E++D  L +T     +     +A+ CV
Sbjct:  643 GADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAG-AFEIVDDILKETFDPASMKKAASIAIRCV 860          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.367e-31
Identity = 78/228 (34.21%), Postives = 129/228 (56.58%), Query Frame = 1
Query:   13 EFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFD-PIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLF--IRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQ----EKPKI 675
            +F+ EV + +   H NL+R+ GFC+   E +L+Y YM   S+   L + P     LDW KR               ++    IIHRD+K +NILLDE+ +  + DFGLA++   +D    T  + GT G+I PEY+  G  S K+DV+ +GV+ L++I+G++ F   R   ++++ L+++  E+ K+ K   L+DA L+  +   ++   +Q+ALLC Q    E+PK+
Sbjct:  335 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKM 561          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.397e-31
Identity = 71/221 (32.13%), Postives = 117/221 (52.94%), Query Frame = 1
Query:   10 EEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEKPK 672
            EEF NE++L +++ H N++++LG C++T+  +L+YEY+P   L   L D      + W+ R                 +   I HRD+K +NILLDE  + K+SDFG +R    D     T  + GT GY+ PEY     Y+ KSDVYSFGV+ +++I+G +   R    E   L  +  E  K+ + ++++D  + D     +++   ++A  C+  K K
Sbjct:  468 EEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTT-LVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGK 687          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.397e-31
Identity = 82/228 (35.96%), Postives = 119/228 (52.19%), Query Frame = 1
Query:    1 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLI--LDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGM-ELMDASLDDTHSSWKLLTCLQVALLCVQEKPKI 675
            QG +E+  EV    +L H NL+ ++G+C + +  +L+YE+MPK SL+  LF   RR    L W  R               E ++  +I+RD K +NILLD D   K+SDFGLA+     D    + +++GT GY  PEYV  G  + KSDVYSFGV+ L++ISGRR           SLV++A     D + +  +MD  L   +      T   +AL C+    K+
Sbjct:  132 QGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLF---RRGAQPLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKL 355          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.743e-31
Identity = 75/219 (34.25%), Postives = 119/219 (54.34%), Query Frame = 1
Query:   10 EEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEK 666
            +EF+ E  L   + H NL   +G+C D +   LIYEYM   +L  +L        L W+KR                  R  I+HRD+K +NILL+++L+ KI+DFGL+++F +DDL      ++GT GY+ PEY      + KSDVYSFG++ L++I+G+R  ++    E +++V Y     K G    ++D  L    SS      ++VA+ CV+++
Sbjct:  619 KEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSSENAE-DLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDR 836          
The following BLAST results are available for this feature:
BLAST of CX296825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
PSKR1_DAUCA5.194e-3235.29Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
LRKA2_ARATH6.784e-3234.22Lectin-domain containing receptor kinase A4.2 OS=A... [more]
Y2296_ARATH1.511e-3136.94Probable receptor-like protein kinase At2g42960 OS... [more]
LRKA3_ARATH1.511e-3134.07Lectin-domain containing receptor kinase A4.3 OS=A... [more]
LRKA1_ARATH1.974e-3135.11Lectin-domain containing receptor kinase A4.1 OS=A... [more]
Y5487_ARATH2.578e-3136.53Probable LRR receptor-like serine/threonine-protei... [more]
SERK4_ARATH3.367e-3134.21Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
WAKLA_ARATH4.397e-3132.13Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
APK2A_ARATH4.397e-3135.96Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y4291_ARATH5.743e-3134.25Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05803C04SK FerrChloL1 Citrus clementina cDNA clone C05803C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296825 ID=CX296825; Name=CX296825; organism=Citrus clementina; type=EST; length=711bp
CAAGGATTTGAGGAGTTCAAGAATGAGGTTATGCTTACTGCAAAGCTTCA
ACACGTAAATCTGATCCGAGTTTTGGGTTTTTGCATCGACACACAAGAAA
ATATGCTCATCTATGAGTATATGCCAAAACGAAGCCTAGACTATTTCCTT
TTTGATCCCATCAGAAGGCTTATTTTGGATTGGAAAAAACGTATTCATAT
CATTCAAGGAATTATTCAGGGGCTTCTCTATCTCCAAGAATATTCTAGAT
TAACAATTATTCATCGAGACTTAAAAGTTAGTAATATTTTGTTGGATGAA
GATTTGAAACCTAAAATATCAGATTTTGGCTTGGCTAGAATTTTTGTGAA
AGATGATCTTGAAGCAAACACGAATCGAATTGTTGGAACACAAGGCTATA
TTCCTCCTGAATATGTTGGAAGAGGTGTTTACTCCACTAAATCTGATGTC
TACAGTTTTGGGGTTTTGTTTCTACAAATTATAAGTGGAAGAAGACTTTT
CATTCGATATGGTCAAAATGAAAATCTAAGCCTTGTAGAGTATGCTTACG
AGTTGTGGAAGGATGGGAAAGGCATGGAGTTAATGGATGCATCACTAGAT
GATACGCATTCCTCATGGAAATTATTGACATGTCTGCAAGTAGCTTTGCT
ATGTGTTCAGGAGAAACCCAAAATAGACCTTCTATACTGGAAATTTCTTC
GATGCTCGAAA
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