CX296825

Overview
NameCX296825
Unique NameCX296825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29
Identity = 75/231 (32.47%), Postives = 129/231 (55.84%), Query Frame = 1
Query:    4 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLF-----DPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEAN-TNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRL--FIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEKPK 672
            G   F+ EV + +   H NL+R++GFC    E +L+Y +M   SL + L      DP+    LDW+ R               E+    IIHRD+K +N+LLDED +  + DFGLA++   D    N T ++ GT G+I PEY+  G  S ++DV+ +G++ L++++G+R   F R  + +++ L+++  +L ++ +   ++D +LD  +   ++   +QVALLC Q  P+
Sbjct:  328 GDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPV----LDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV--DVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPE 552          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29
Identity = 72/221 (32.58%), Postives = 119/221 (53.85%), Query Frame = 1
Query:   13 EFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIR-RLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEKPK 672
            EF+ EV   ++ +H NL+ + G+C    + +LIY +M   SLDY+L + +   + L W  R               +     +IHRD+K SNILLDE  +  ++DFGLAR+    D    T+ +VGT GYIPPEY    + + + DVYSFGV+ L++++GRR            LV   +++  + +  EL+D ++ +  +   +L  L++A  C+  +P+
Sbjct:  794 EFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTD-LVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCIDHEPR 1013          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.413e-29
Identity = 78/224 (34.82%), Postives = 123/224 (54.91%), Query Frame = 1
Query:    4 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQ--NENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEKP 669
            G  +F+ E+ + +   H NL+R++G+C  + E +L+Y YM   S+   L     +  LDW  R               E     IIHRD+K +NILLDE  +  + DFGLA++   +D    T  + GT G+I PEY+  G  S K+DV+ FG+L L++I+G R  + +G+  ++  +++E+  +L K+ K  EL+D  L  T+   ++   LQVALLC Q  P
Sbjct:  337 GNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLK---AKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTT-AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRA-LEFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLP 555          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.413e-29
Identity = 79/230 (34.35%), Postives = 124/230 (53.91%), Query Frame = 1
Query:    1 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRR----LILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGM-ELMDASLDDTHSSWKLLTCLQVALLCVQEKPKI 675
            QG +E+  EV    +  H NL++++G+C++ +  +L+YE+MP+ SL+  LF   RR      L W  R                 +  ++I+RD K SNILLD +   K+SDFGLA+     D    + RI+GT GY  PEY+  G  +TKSDVYS+GV+ L+++SGRR   +        LVE+A  L  + + +  ++D  L D +S  +      +AL C+  + K+
Sbjct:  115 QGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLF---RRGSYFQPLSWTLRLKVALGAAKGLAFLHN-AETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKL 340          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29
Identity = 67/219 (30.59%), Postives = 115/219 (52.51%), Query Frame = 1
Query:   10 EEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEK 666
            E+F NE++L +++ H N+++++G C++T+  +L+YEY+P   +   L D      + W+ R                 +   I HRD+K +NILLDE    K+SDFG +R    D     T  + GT GY+ PEY     Y+ KSDVYSFGV+ +++I+G +   R    E   L  +  E  K+ + ++++D  + +     +L+   ++A  C+  K
Sbjct:  471 EKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTT-MVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRK 688          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29
Identity = 82/236 (34.75%), Postives = 126/236 (53.39%), Query Frame = 1
Query:    1 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLI-LDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRL--FIRYGQNENLSLVEYAYELWKDGKGMELMDASL--DDTHSSWKLLTCLQVALLCVQEKPKIDLLYWK 693
            QG  EF  E+    K++H NL+ +LG+C   +E +L+YEYM   SL+  L D  +  I L+W  R                     IIHRD+K SN+LLDE+L+ ++SDFG+AR+    D   + + + GT GY+PPEY      STK DVYS+GV+ L++++G++      +G N  +  V    +L   GK  ++ D  L  +D     +LL  L+VA  C+ ++      +WK
Sbjct:  924 QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNNLVGWV----KLHAKGKITDVFDRELLKEDASIEIELLQHLKVACACLDDR------HWK 1149          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.375e-29
Identity = 75/221 (33.94%), Postives = 118/221 (53.39%), Query Frame = 1
Query:    1 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSL-DYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQ 660
            QG  EF NE+ L + +QH NL+ +LG+C +  + +L+Y +M   SL D    +  +R ILDW  R                +   ++IHRD+K SNILLD+ +  K++DFG ++   ++     +  + GT GY+ PEY      S KSDV+SFGV+ L+I+SGR            SLVE+A    +  K  E++D  +   + +  L   ++VAL C++
Sbjct:  632 QGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLE 852          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29
Identity = 82/236 (34.75%), Postives = 126/236 (53.39%), Query Frame = 1
Query:    1 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLI-LDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRL--FIRYGQNENLSLVEYAYELWKDGKGMELMDASL--DDTHSSWKLLTCLQVALLCVQEKPKIDLLYWK 693
            QG  EF  E+    K++H NL+ +LG+C   +E +L+YEYM   SL+  L D  +  I L+W  R                     IIHRD+K SN+LLDE+L+ ++SDFG+AR+    D   + + + GT GY+PPEY      STK DVYS+GV+ L++++G++      +G N  +  V    +L   GK  ++ D  L  +D     +LL  L+VA  C+ ++      +WK
Sbjct:  924 QGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNNLVGWV----KLHAKGKITDVFDRELLKEDASIEIELLQHLKVACACLDDR------HWK 1149          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29
Identity = 80/226 (35.40%), Postives = 123/226 (54.42%), Query Frame = 1
Query:    1 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLI-LDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIR--YGQNENLSLV-EYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEK 666
            QG  EF  E+    K++H NL+ +LG+C    E +L+YE+M   SL+  L DP +  + L+W  R                     IIHRD+K SN+LLDE+L+ ++SDFG+AR+    D   + + + GT GY+PPEY      STK DVYS+GV+ L++++G+R      +G N  +  V ++A     D    ELM    +D     +LL  L+VA+ C+ ++
Sbjct:  919 QGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSPDFGDNNLVGWVKQHAKLRISDVFDPELMK---EDPALEIELLQHLKVAVACLDDR 1141          
BLAST of CX296825 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.168e-29
Identity = 77/226 (34.07%), Postives = 117/226 (51.77%), Query Frame = 1
Query:    4 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPI-RRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIR-YGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEKPKI 675
            G  +F+ EV +     H NL+R+ GFC+  +E ML+Y YMP  S+   L D    +  LDW +R               E     IIHRD+K +NILLDE  +  + DFGLA++  + D    T  + GT G+I PEY+  G  S K+DV+ FGVL L++I+G ++  +  GQ     ++ +   L  + +  E++D  L        L   +++ALLC Q  P +
Sbjct:  337 GEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTT-AVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNL 561          
The following BLAST results are available for this feature:
BLAST of CX296825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
Y5129_ARATH1.847e-2932.47Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH1.847e-2932.58Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y2239_ARATH2.413e-2934.82Probable LRR receptor-like serine/threonine-protei... [more]
APK1B_ARATH2.413e-2934.35Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
WAKLE_ARATH4.116e-2930.59Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
BRI1_SOLPE4.116e-2934.75Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
NORK_MEDTR5.375e-2933.94Nodulation receptor kinase OS=Medicago truncatula ... [more]
BRI1_SOLLC7.020e-2934.75Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRI1_ARATH7.020e-2935.40Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y5457_ARATH9.168e-2934.07Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05803C04SK FerrChloL1 Citrus clementina cDNA clone C05803C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296825 ID=CX296825; Name=CX296825; organism=Citrus clementina; type=EST; length=711bp
CAAGGATTTGAGGAGTTCAAGAATGAGGTTATGCTTACTGCAAAGCTTCA
ACACGTAAATCTGATCCGAGTTTTGGGTTTTTGCATCGACACACAAGAAA
ATATGCTCATCTATGAGTATATGCCAAAACGAAGCCTAGACTATTTCCTT
TTTGATCCCATCAGAAGGCTTATTTTGGATTGGAAAAAACGTATTCATAT
CATTCAAGGAATTATTCAGGGGCTTCTCTATCTCCAAGAATATTCTAGAT
TAACAATTATTCATCGAGACTTAAAAGTTAGTAATATTTTGTTGGATGAA
GATTTGAAACCTAAAATATCAGATTTTGGCTTGGCTAGAATTTTTGTGAA
AGATGATCTTGAAGCAAACACGAATCGAATTGTTGGAACACAAGGCTATA
TTCCTCCTGAATATGTTGGAAGAGGTGTTTACTCCACTAAATCTGATGTC
TACAGTTTTGGGGTTTTGTTTCTACAAATTATAAGTGGAAGAAGACTTTT
CATTCGATATGGTCAAAATGAAAATCTAAGCCTTGTAGAGTATGCTTACG
AGTTGTGGAAGGATGGGAAAGGCATGGAGTTAATGGATGCATCACTAGAT
GATACGCATTCCTCATGGAAATTATTGACATGTCTGCAAGTAGCTTTGCT
ATGTGTTCAGGAGAAACCCAAAATAGACCTTCTATACTGGAAATTTCTTC
GATGCTCGAAA
back to top