CX296830

Overview
NameCX296830
Unique NameCX296830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.998e-29
Identity = 83/215 (38.60%), Postives = 120/215 (55.81%), Query Frame = 1
Query:   61 ISGFVFSVLFKLILAAVRGGSRDSGPAIFSPLIKKAEDLAFLEKE--DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            ++G VF V   + +A  R         + +   +    L F E E  D L     IG G  G+VYK EL G  G+++A+KK+ +  K   +    DS  LN+ +    +E+ T+G IRH++++ L    +  DC LLVYE+M NGSL D+L+   +G   L W  R +IAL  A GL YLH    P I+HRD+K +N+LLD D  A++ADFG+AK
Sbjct:  634 LAGLVFVVGIVMFIAKCRKLRALKSSTLAASKWRSFHKLHFSEHEIADCLDEKNVIGFGSSGKVYKVELRG--GEVVAVKKLNKSVKGGDDEYSSDS--LNRDV--FAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAK 842          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.450e-29
Identity = 72/170 (42.35%), Postives = 102/170 (60.00%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYN 729
            IG G  G VYKAE+P  NG ++A+KK+ +        T+++++     +    +EI  +G IRHRN++ LL + +     LL+Y +  NG+LQ +L    QG R LDW  R+KIA+G A GL YLH    P I+HRD+K  N+LLD   EA +ADFGLAK  +    Y+N
Sbjct:  778 IGKGCSGIVYKAEIP--NGDIVAVKKLWK--------TKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLL----QGNRNLDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHN 933          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.450e-29
Identity = 72/172 (41.86%), Postives = 103/172 (59.88%), Query Frame = 1
Query:  184 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            LE  + L     IG G  G +YKA L  S  K+ A+KK++             + + N  +  +R EI T+G++RHRNL+ L     R +  L++Y +M+NGSL DIL++ +  +  LDW  RH IA+G A GL YLH   +P I+HRD+KP N+LLD D+E  I+DFG+AK
Sbjct:  810 LEATENLNDKYVIGKGAHGTIYKATL--SPDKVYAVKKLVF------------TGIKNGSVSMVR-EIETIGKVRHRNLIKLEEFWLRKEYGLILYTYMENGSLHDILHETNPPK-PLDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAK 965          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.914e-29
Identity = 86/226 (38.05%), Postives = 119/226 (52.65%), Query Frame = 1
Query:   61 ISGFVFSVLFKLILAAVRGGSRDSGP-----AIFSPLIKKAEDLAFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK---ACLMH 714
            + GFV   L+ L       GSR   P     A+F   + K      +E  D  +    IG GG G VYKA LPG   K +A+KK+              S+   +  R+  +E+ T+G+++H NL+ LL + +  +  LLVYE+M NGSL   L + +     LDW  R KIA+G A GL +LH    P IIHRD+K +N+LLD D E ++ADFGLA+   AC  H
Sbjct:  871 LKGFVDQNLYFL------SGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGE--KTVAVKKL--------------SEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESH 1074          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.691e-28
Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARP--DCHLLVYEFMKNGSLQDIL--NDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            IGSGG G+VYKAEL   NG+ IA+KK++           +D  + NK   +   E+ T+G IRHR+L+ L+ + +      +LL+YE+M NGS+ D L  N+ ++ +  L W  R KIALG+A G+EYLH    P I+HRD+K +NVLLD ++EA + DFGLAK
Sbjct:  954 IGSGGSGKVYKAEL--KNGETIAVKKILW----------KDDLMSNKSFNR---EVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAK 1102          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.393e-28
Identity = 81/202 (40.10%), Postives = 115/202 (56.93%), Query Frame = 1
Query:  103 AAVRGGSR-DSGPAIFS--PLIKKAEDLAFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            +AVRGG   D G A F   P++++A D             +K+G G  G VY   +   +GK +A+K           +T + S  LN   RQ  +E+  + +I HRNL+PL+ +    D  +LVYE+M NGSL D L+  S   + LDWL R +IA   A GLEYLH   NP IIHRD+K +N+LLD +M A+++DFGL++
Sbjct:  580 SAVRGGHLLDEGVAYFISLPVLEEATD----------NFSKKVGRGSFGSVYYGRM--KDGKEVAVK-----------ITADPSSHLN---RQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHG-SSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSR 754          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 8.393e-28
Identity = 73/185 (39.46%), Postives = 107/185 (57.84%), Query Frame = 1
Query:  145 FSPLIKKAEDLAFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            F  L  K+ED+    KE+ +     IG GG G VY+  +P  N   +AIK+++              +   +      +EI T+G+IRHR+++ LL ++A  D +LL+YE+M NGSL ++L+    G   L W  RH++A+  A GL YLH   +P I+HRD+K  N+LLD D EA +ADFGLAK
Sbjct:  678 FQKLDFKSEDVLECLKEENI-----IGKGGAGIVYRGSMP--NNVDVAIKRLV-------------GRGTGRSDHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGH--LQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAK 840          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.432e-27
Identity = 71/162 (43.83%), Postives = 99/162 (61.11%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRR--ELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            IGSGG G VY+ +L   +G+ +A+KK+     +  + TE +S          RSE+ T+G++RH N++ LL      +   LVYEFM+NGSL D+L+   + R    LDW  R  IA+G A GL YLH    P I+HRD+K  N+LLD +M+ R+ADFGLAK
Sbjct:  692 IGSGGSGLVYRVKL--KSGQTLAVKKLWG---ETGQKTESESVF--------RSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAK 840          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.189e-27
Identity = 75/180 (41.67%), Postives = 105/180 (58.33%), Query Frame = 1
Query:  175 LAFLEKEDGLASLEK---IGSGGCGEVYKAELPGSNGKMIAIKKV-IQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKA 702
            L F E E  L SL++   IG+G  G+VYK  L  +NG+ +A+K++     K+  +   E       +     +E+ T+G+IRH+N++ L    +  DC LLVYE+M NGSL D+L+    G   L W  R KI L  A GL YLH    P I+HRD+K  N+L+D D  AR+ADFG+AKA
Sbjct:  665 LGFSEHEI-LESLDEDNVIGAGASGKVYKVVL--TNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGM--LGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKA 839          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.105e-27
Identity = 80/232 (34.48%), Postives = 123/232 (53.02%), Query Frame = 1
Query:   49 IAGTISGFVFSVLFKLILAAVRGGSRDSGPAIFS--PLIKKAEDLAFLEKE-----------DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA--HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            I  ++ G +  +L  +++  +R     + P +    P  +++ D+ F+ KE            G      +G G CG VYKA +P  +GK IA+KK+           E ++   N      R+EI T+G+IRHRN++ L +  +    + +LL+YE+M  GSL ++L+        +DW  R  IALG A GL YLH    PRIIHRD+K  N+L+D++ EA + DFGLAK
Sbjct:  756 IVSSVIGGISLLLIAIVVHFLRNPVEPTAPYVHDKEPFFQES-DIYFVPKERFTVKDILEATKGFHDSYIVGRGACGTVYKAVMP--SGKTIAVKKL-------ESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKS--HSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAK 975          
The following BLAST results are available for this feature:
BLAST of CX296830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 362
Match NameE-valueIdentityDescription
RLK5_ARATH1.998e-2938.60Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
Y1341_ARATH4.450e-2942.35Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_IPONI4.450e-2941.86Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
EXS_ARATH9.914e-2938.05Leucine-rich repeat receptor protein kinase EXS OS... [more]
GSO2_ARATH1.691e-2845.12LRR receptor-like serine/threonine-protein kinase ... [more]
Y1677_ARATH8.393e-2840.10Probable LRR receptor-like serine/threonine-protei... [more]
CLV1_ARATH8.393e-2839.46Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
HSL2_ARATH1.432e-2743.83LRR receptor-like serine/threonine-protein kinase ... [more]
HSL1_ARATH3.189e-2741.67Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
Y2317_ARATH7.105e-2734.48Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionC05803C09SK FerrChloL1 Citrus clementina cDNA clone C05803C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296830 ID=CX296830; Name=CX296830; organism=Citrus clementina; type=EST; length=742bp
AAGGGAAAGAAGGCAGCTGGGTGGATTTCAGGATTTATTGCTGGAGCAAT
AGCGGGTACTATTTCTGGGTTCGTGTTTTCTGTTCTTTTTAAGCTAATCT
TGGCGGCGGTAAGGGGTGGAAGTAGAGATTCTGGCCCAGCAATCTTTAGT
CCATTAATCAAGAAAGCTGAGGACTTAGCTTTCTTGGAAAAAGAAGATGG
TCTTGCTTCGTTGGAGAAAATAGGATCAGGTGGATGCGGAGAAGTTTACA
AAGCTGAGCTACCTGGAAGCAATGGAAAGATGATTGCTATTAAGAAGGTT
ATTCAACCTCCAAAGGATGCCGCAGAATTGACTGAAGAAGATAGTAAGTT
ACTGAACAAGAAAATGAGGCAAATTCGGTCTGAGATTAACACTGTGGGTC
AAATTAGGCACAGGAATCTTCTCCCTCTGCTGGCTCATATGGCCAGGCCT
GACTGCCACTTACTGGTGTACGAATTCATGAAGAACGGAAGTTTACAGGA
CATTCTAAATGATGTCTCGCAAGGAAGAAGAGAATTAGACTGGCTAGCTA
GGCATAAGATCGCATTGGGAGTAGCTTGCGGGCTTGAGTATCTGCATATA
AGCCACAACCCTCGCATAATCCACAGAGATCTCAAGCCAGCGAACGTGCT
TCTTGACGATGATATGGAAGCCAGGATCGCTGATTTTGGGCTTGCAAAGG
CATGCCTGATGCACAACACATATTACAACTTCAATGTGGCCG
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