CX296830

Overview
NameCX296830
Unique NameCX296830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21
Identity = 82/253 (32.41%), Postives = 116/253 (45.85%), Query Frame = 1
Query:    1 KGKKAAGWISGFIAGAIAGTISGFVFSVLFKLILAAVRGGS------RDSGPAIFSPLIKKAEDLAFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYNFNVA 741
            KGK   G I G I G   G +S     V+F +     R          D  P IF+    K+    F           K+G GG G VYK  L  ++G+++A+K +    +                  Q  +EI  +  + HRNL+ L       +  +LVYE++ NGSL   L         LDW  R++I LGVA GL YLH   + RI+HRD+K +N+LLD  +  +I+DFGLAK      T+ +  VA
Sbjct:  630 KGKNRTGTIVGVIVGV--GLLSILAGVVMFTIRKRRKRYTDDEELLGMDVKPYIFTYSELKSATQDFDPSN-------KLGEGGFGPVYKGNL--NDGRVVAVKLLSVGSRQGKG--------------QFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQAL--FGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVA 855          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.460e-21
Identity = 66/161 (40.99%), Postives = 93/161 (57.76%), Query Frame = 1
Query:  217 KIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            K+G GG GEV+K  L  S+G+ IAIK++    K              K   +I +EI+ + + +H+NL+ LL          +VYEF+ N SL  IL +  + ++ELDW  R  I LG A GLEYLH     +IIHRD+K +N+LLD   + +I+DFGLAK
Sbjct:  336 KLGVGGYGEVFKGTL--SDGREIAIKRLHVSGK--------------KPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHILFNPEK-KKELDWKKRRTIILGTAEGLEYLH--ETCKIIHRDIKASNILLDLKYKPKISDFGLAK 477          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.608e-21
Identity = 66/186 (35.48%), Postives = 99/186 (53.23%), Query Frame = 1
Query:  142 IFSPLIKKAEDLAFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            +F   I K + +  +E  +G  S   + S   G  YKA+LP  +G  + +K++        EL+E          +Q RSEIN +GQIRH NL+PLL      D  LLVY+ M NG+L   L      + ++DW  R ++A+G A GL +LH    P  +H+ +    +LLD+D +AR+ D+GL K
Sbjct:  275 LFQKPIVKIKLVDLIEATNGFDSGNIVVSSRSGVSYKADLP--DGSTLEVKRL----SSCCELSE----------KQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMANGTLYSQLQ-----QWDIDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGK 439          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.608e-21
Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 1
Query:  187 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKA 702
            +++   A   ++G GG G VYK  +   N  ++A+KK+        E++ E+ K      +Q   EI  +   +H NL+ LL   +  D   LVY +M NGSL D L+ +  G   L W  R K+A G A G+ +LH +H+   IHRD+K AN+LLD D  A+I+DFGLA+A
Sbjct:  181 DEQPASAGGNRMGEGGFGVVYKGCV---NNTIVAVKKL----GAMVEISTEELK------QQFDQEIKVMATCQHENLVELLGFSSDSDNLCLVYAYMPNGSLLDRLSCLD-GTPPLSWHTRCKVAQGTANGIRFLHENHH---IHRDIKSANILLDKDFTAKISDFGLARA 335          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.937e-21
Identity = 65/162 (40.12%), Postives = 92/162 (56.79%), Query Frame = 1
Query:  217 KIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKA 702
            K+G GG G VYK  +   N   +A+KK+        ++T E+ K      +Q   EI  + + +H NL+ LL   +  D   LVY +M NGSL D L+ +  G   L W  R KIA G A G+ +LH +H+   IHRD+K AN+LLD+   A+I+DFGLA+A
Sbjct:  191 KMGEGGFGVVYKGYV---NNTTVAVKKLAA----MVDITTEELK------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 335          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.298e-20
Identity = 61/160 (38.12%), Postives = 89/160 (55.62%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            IG GG G+VYK  L       +A+K+    P+    L E             ++E+  + Q RHR+L+ L+ +       ++VYE+M+ G+L+D L D+    R L W  R +I +G A GL YLH      IIHRD+K AN+LLDD+  A++ADFGL+K
Sbjct:  493 IGVGGFGKVYKGVLRDKTE--VAVKR--GAPQSRQGLAE------------FKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPR-LSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSK 635          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.298e-20
Identity = 65/171 (38.01%), Postives = 97/171 (56.73%), Query Frame = 1
Query:  187 EKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            E  DG      +G GG G VYK  LP ++  ++AIKK        A L +      N ++ Q  +E+  + QI HRN++ LL      +  LLVYEF+ +G+L D L+  S     L W  R ++A+ +A  L YLH S +  IIHRD+K AN+LLD+++ A++ADFG ++
Sbjct:  405 EATDGYDENRILGQGGQGTVYKGILPDNS--IVAIKK--------ARLGD------NSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHG-SMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASR 558          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.298e-20
Identity = 67/168 (39.88%), Postives = 96/168 (57.14%), Query Frame = 1
Query:  196 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            +G A    +G GG G VYK  LP ++  ++AIKK        A L +      + ++ Q  +E+  + QI HRN++ LL      +  LLVYEF+ NG+L D L+  S     L W  R KIA+ VA  L YLH S +  IIHRD+K AN+LLD ++ A++ADFG ++
Sbjct:  407 NGYAESRILGQGGQGTVYKGILPDNS--IVAIKK--------ARLGD------SSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHG-SMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASR 557          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.298e-20
Identity = 62/175 (35.43%), Postives = 91/175 (52.00%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQ---PPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYNFN 735
            +G G  G VY+A+    +GK++A+KK+     P   A + TE  SK               +  + H N+  L  + +    HL+VYEF +NGSL D L+   +  + L W  R KIALG A  LEYLH   +P I+H+++K AN+LLD ++   ++D GLA      N   N N
Sbjct:  425 LGEGTFGRVYRAQF--EDGKVLAVKKIDSSALPTDTADDFTEIVSK---------------IAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQN 582          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.695e-20
Identity = 80/243 (32.92%), Postives = 118/243 (48.56%), Query Frame = 1
Query:   31 GFIAGAIAGTISGFVFSVLFKLILAAVRGGSRDSGPAIFSPLIKKAEDLAFLEKEDGLASLEKIGSG-------------------GCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLA-HMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            G +AG + G +SG V  V+  L++  ++   R S       L +  E+    EKE G   L     G                     G VYKA+L  S+G  IA++ +        E T +D       +RQ+       G+IRH NL+PL A +  +    LL+Y+++ N SL D+L++    +  L+W  RHKIALG+A GL YLH      IIH +++  NVL+DD   AR+ +FGL K
Sbjct:  299 GAVAGLVIGLMSGAV--VVASLLIGYLQNKKRKSSIESEDDLEEGDEEDEIGEKEGGEGKLVVFQGGENLTLDDVLNATGQVMEKTSYGTVYKAKL--SDGGNIALRLL-------REGTCKDRSSCLPVIRQL-------GRIRHENLVPLRAFYQGKRGEKLLIYDYLPNISLHDLLHESKPRKPALNWARRHKIALGIARGLAYLHTGQEVPIIHGNIRSKNVLVDDFFFARLTEFGLDK 523          
The following BLAST results are available for this feature:
BLAST of CX296830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 362
Match NameE-valueIdentityDescription
Y1561_ARATH4.460e-2132.41Probable LRR receptor-like serine/threonine-protei... [more]
CRK43_ARATH4.460e-2140.99Putative cysteine-rich receptor-like protein kinas... [more]
Y1699_ARATH7.608e-2135.48Probable LRR receptor-like serine/threonine-protei... [more]
IRAK4_MOUSE7.608e-2137.79Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
IRAK4_HUMAN9.937e-2140.12Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
Y2393_ARATH1.298e-2038.13Probable receptor-like protein kinase At2g39360 OS... [more]
WAK4_ARATH1.298e-2038.01Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
WAK1_ARATH1.298e-2039.88Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
SRF7_ARATH1.298e-2035.43Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
TMKL1_ARATH1.695e-2032.92Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05803C09SK FerrChloL1 Citrus clementina cDNA clone C05803C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296830 ID=CX296830; Name=CX296830; organism=Citrus clementina; type=EST; length=742bp
AAGGGAAAGAAGGCAGCTGGGTGGATTTCAGGATTTATTGCTGGAGCAAT
AGCGGGTACTATTTCTGGGTTCGTGTTTTCTGTTCTTTTTAAGCTAATCT
TGGCGGCGGTAAGGGGTGGAAGTAGAGATTCTGGCCCAGCAATCTTTAGT
CCATTAATCAAGAAAGCTGAGGACTTAGCTTTCTTGGAAAAAGAAGATGG
TCTTGCTTCGTTGGAGAAAATAGGATCAGGTGGATGCGGAGAAGTTTACA
AAGCTGAGCTACCTGGAAGCAATGGAAAGATGATTGCTATTAAGAAGGTT
ATTCAACCTCCAAAGGATGCCGCAGAATTGACTGAAGAAGATAGTAAGTT
ACTGAACAAGAAAATGAGGCAAATTCGGTCTGAGATTAACACTGTGGGTC
AAATTAGGCACAGGAATCTTCTCCCTCTGCTGGCTCATATGGCCAGGCCT
GACTGCCACTTACTGGTGTACGAATTCATGAAGAACGGAAGTTTACAGGA
CATTCTAAATGATGTCTCGCAAGGAAGAAGAGAATTAGACTGGCTAGCTA
GGCATAAGATCGCATTGGGAGTAGCTTGCGGGCTTGAGTATCTGCATATA
AGCCACAACCCTCGCATAATCCACAGAGATCTCAAGCCAGCGAACGTGCT
TCTTGACGATGATATGGAAGCCAGGATCGCTGATTTTGGGCTTGCAAAGG
CATGCCTGATGCACAACACATATTACAACTTCAATGTGGCCG
back to top