CX296830

Overview
NameCX296830
Unique NameCX296830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.026e-25
Identity = 69/191 (36.13%), Postives = 100/191 (52.36%), Query Frame = 1
Query:  127 DSGPAIFSPLIKKAEDLAFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            +  P +    +K+      L   D  ++   +G GG G+VYK  L  ++G ++A+K++ +      EL             Q ++E+  +    HRNLL L      P   LLVY +M NGS+   L +  +G   LDW  R  IALG A GL YLH   + +IIHRD+K AN+LLD++ EA + DFGLAK
Sbjct:  269 EEDPEVHLGQLKRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRL--ADGNLVAVKRLKEERTKGGEL-------------QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAK 444          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.340e-25
Identity = 66/168 (39.29%), Postives = 97/168 (57.74%), Query Frame = 1
Query:  196 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            D  +   K+G GG G+VYK  LP  NG  +A+K++              SK   +  ++ ++E+  V +++HRNL+ LL      +  +LVYEF+ N SL   L D S+ + +LDW  R+KI  G+A G+ YLH      IIHRDLK  N+LLD DM  ++ADFG+A+
Sbjct:  338 DKFSMCNKLGQGGFGQVYKGTLP--NGVQVAVKRL--------------SKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFD-SRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMAR 488          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.750e-25
Identity = 68/176 (38.64%), Postives = 100/176 (56.82%), Query Frame = 1
Query:  184 LEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMR----QIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            +E  D + S   IG GG G VYK  L   +G+ +A+K +  P           + L +   R    +  +E+ T+  I+H N++ L   +   D  LLVYE+M NGSL + L++  +G +E+ W  R  +ALG A GLEYLH   +  +IHRD+K +N+LLD++   RIADFGLAK
Sbjct:  665 MEIIDEIKSENIIGRGGQGNVYKVSL--RSGETLAVKHIWCPESSHESFRSSTAMLSDGNNRSNNGEFEAEVATLSNIKHINVVKLFCSITCEDSKLLVYEYMPNGSLWEQLHE-RRGEQEIGWRVRQALALGAAKGLEYLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAK 837          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.750e-25
Identity = 69/171 (40.35%), Postives = 99/171 (57.89%), Query Frame = 1
Query:  217 KIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYN 729
            K+G GG GEVYK +L    G+ +AIK++ Q     AE              + ++E++ V +++HRNL  LL +    +  +LVYEF+ N SL   L D ++ RR LDW  R+KI  G+A G+ YLH      IIHRDLK +N+LLD DM  +I+DFG+A+   +  T  N
Sbjct:  352 KLGHGGFGEVYKGQL--ITGETVAIKRLSQGSTQGAE--------------EFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFD-NEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQAN 505          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25
Identity = 80/226 (35.40%), Postives = 113/226 (50.00%), Query Frame = 1
Query:   31 GFIAGAIAGTISGFVFSVLFKLILAAVRGGSRDSGPAIFSPLIKKAEDLAFLEKEDGLASL---EKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            G   GA+  T   FVF  +F       R   RD   A        A  + F  KE   A+    E IG G  G VY+ +LP  +GK +A+K      +  A+                 +E++ + QIRH+NL+        P   +LVYE++  GSL D L      R  L+W++R K+A+  A GL+YLH    PRIIHRD+K +N+LLD DM A+++DFGL+K
Sbjct:  550 GVSGGALFATFLVFVFMSIFT---RRQRNKERDITRAQLKMQNWNASRI-FSHKEIKSATRNFKEVIGRGSFGAVYRGKLP--DGKQVAVKVRFDRTQLGAD--------------SFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSK 755          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.092e-25
Identity = 66/162 (40.74%), Postives = 98/162 (60.49%), Query Frame = 1
Query:  214 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            E++G GG G V+K  LP  +GK IA+K++       +E TE+  K       + ++E+  V +++HRNL+ LL    + +  ++VYE++ N SL  IL D ++ + ELDW  R+KI  G A G+ YLH    P IIHRDLK  N+LLD  M  ++ADFG A+
Sbjct:  362 ERLGHGGSGHVFKGRLP--DGKEIAVKRL-------SEKTEQSKK-------EFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTK-QGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTAR 506          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25
Identity = 67/168 (39.88%), Postives = 98/168 (58.33%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTY 723
            IG GG G VYKA LP  +G  +AIK++      + +  + D        R+ ++E+ T+ + +H NL+ LL +    +  LL+Y +M NGSL   L++   G   LDW  R +IA G A GL YLH S  P I+HRD+K +N+LL D   A +ADFGLA+  L ++T+
Sbjct:  749 IGCGGFGLVYKATLP--DGTKVAIKRL------SGDTGQMD--------REFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTH 900          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25
Identity = 67/168 (39.88%), Postives = 98/168 (58.33%), Query Frame = 1
Query:  196 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            D  +S  ++G GG G VYK   P   G+ IA+K++              S    +   + ++EI  + +++HRNL+ L+    + +  LLVYEF+KN SL   + D  + R+ LDW+ R+K+  G+A GL YLH     RIIHRDLK +N+LLD +M  +IADFGLAK
Sbjct:  355 DNFSSENELGRGGFGSVYKGVFP--QGQEIAVKRL--------------SGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEK-RQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAK 505          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25
Identity = 73/177 (41.24%), Postives = 102/177 (57.63%), Query Frame = 1
Query:  172 DLAFLEKEDGLASLE-KIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            D + L+      SLE K+G GG G VYK  L  S+G+ IA+K++              SK   +   + ++E   V +++HRNL+ LL +       LLVYEF+ + SL   + D  QG  EL+W  R+KI  GVA GL YLH     RIIHRDLK +N+LLD++M  +IADFG+A+
Sbjct:  333 DFSVLQDATSHFSLENKLGEGGFGAVYKGVL--SDGQKIAVKRL--------------SKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGN-ELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMAR 492          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25
Identity = 83/243 (34.16%), Postives = 119/243 (48.97%), Query Frame = 1
Query:   31 GFIAGAIAGTISGFVFSVLFKLILAAVRGGSRDS-------GPAIFSPLIKKAEDLAFLEKEDG-LASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYNFN 735
            G  AG +       V ++L  L+L  V    R S         +  S       D   +E      ++  K+G GG G VYK +L  SNG  +A+K++              SK   +  R+ R+E   V +++HRNL+ LL      +  +L+YEF+ N SL   L D  + + +LDW  R+KI  G+A G+ YLH     +IIHRDLK +N+LLD DM  +IADFGLA    +  T  N N
Sbjct:  285 GISAGVVVAITVPTVIAILILLVLGFVLFRRRKSYQRTKTESESDISTTDSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKL--SNGTDVAVKRL--------------SKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEK-QSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTN 510          
The following BLAST results are available for this feature:
BLAST of CX296830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 362
Match NameE-valueIdentityDescription
SERK4_ARATH1.026e-2536.13Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK5_ARATH1.340e-2539.29Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
IKU2_ARATH1.750e-2538.64Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
CRK25_ARATH1.750e-2540.35Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
Y5487_ARATH2.985e-2535.40Probable LRR receptor-like serine/threonine-protei... [more]
CRK13_ARATH5.092e-2540.74Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
PSKR1_DAUCA6.650e-2539.88Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
CRK29_ARATH6.650e-2539.88Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK26_ARATH6.650e-2541.24Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK11_ARATH6.650e-2534.16Cysteine-rich receptor-like protein kinase 11 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05803C09SK FerrChloL1 Citrus clementina cDNA clone C05803C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296830 ID=CX296830; Name=CX296830; organism=Citrus clementina; type=EST; length=742bp
AAGGGAAAGAAGGCAGCTGGGTGGATTTCAGGATTTATTGCTGGAGCAAT
AGCGGGTACTATTTCTGGGTTCGTGTTTTCTGTTCTTTTTAAGCTAATCT
TGGCGGCGGTAAGGGGTGGAAGTAGAGATTCTGGCCCAGCAATCTTTAGT
CCATTAATCAAGAAAGCTGAGGACTTAGCTTTCTTGGAAAAAGAAGATGG
TCTTGCTTCGTTGGAGAAAATAGGATCAGGTGGATGCGGAGAAGTTTACA
AAGCTGAGCTACCTGGAAGCAATGGAAAGATGATTGCTATTAAGAAGGTT
ATTCAACCTCCAAAGGATGCCGCAGAATTGACTGAAGAAGATAGTAAGTT
ACTGAACAAGAAAATGAGGCAAATTCGGTCTGAGATTAACACTGTGGGTC
AAATTAGGCACAGGAATCTTCTCCCTCTGCTGGCTCATATGGCCAGGCCT
GACTGCCACTTACTGGTGTACGAATTCATGAAGAACGGAAGTTTACAGGA
CATTCTAAATGATGTCTCGCAAGGAAGAAGAGAATTAGACTGGCTAGCTA
GGCATAAGATCGCATTGGGAGTAGCTTGCGGGCTTGAGTATCTGCATATA
AGCCACAACCCTCGCATAATCCACAGAGATCTCAAGCCAGCGAACGTGCT
TCTTGACGATGATATGGAAGCCAGGATCGCTGATTTTGGGCTTGCAAAGG
CATGCCTGATGCACAACACATATTACAACTTCAATGTGGCCG
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