CX296830

Overview
NameCX296830
Unique NameCX296830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.310e-24
Identity = 67/174 (38.51%), Postives = 100/174 (57.47%), Query Frame = 1
Query:  184 LEKEDG-LASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKA 702
            LEK  G   +  K+G GG G VYK  LP  +G+ IA+K++    +  A                  +E+N +  + H+NL+ LL         LLVYE+++N SL   + DV++G+  LDW  R+ I +G A GL YLH   + +IIHRD+K +N+LLD  ++A+IADFGLA++
Sbjct:  318 LEKATGSFDNANKLGQGGFGTVYKGVLP--DGRDIAVKRLFFNNRHRAT--------------DFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKT-LDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARS 474          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.310e-24
Identity = 81/243 (33.33%), Postives = 122/243 (50.21%), Query Frame = 1
Query:    7 KKAAGWISGFIAGAIAGTISGFVFSVLFKLILAAVRGGSRDSG-PAIFSPLIKKAEDLAFLEKEDG-LASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYN 729
            KK    ISG    AI   +   +  ++  L++   R   ++   P + +       DL  +E   G  +   K+G+GG GEVYK  L   NG  IA+K++              SK   +   + ++E+  V +++H NL+ LL    + +  LLVYEF+ N SL   L D ++ R +LDW  R  I  G+  G+ YLH     +IIHRDLK +N+LLD DM  +IADFG+A+   +  T  N
Sbjct:  292 KKNDSRISGGTIAAIVVVVVVTIILIVVGLVICKRRKQKQEIELPIVLNEAESVQFDLKTIEAATGNFSEHNKLGAGGFGEVYKGML--LNGTEIAVKRL--------------SKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNK-RNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVAN 517          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.629e-24
Identity = 65/160 (40.62%), Postives = 94/160 (58.75%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            +G GG G+VYK  LP  NG++IAIK+  Q     A               + ++EI  + ++ H+N++ LL         +LVYE++ NGSL+D L+   +   +LDW  R KIALG   GL YLH   +P IIHRD+K  N+LLD+ + A++ADFGL+K
Sbjct:  640 VGGGGYGQVYKGTLP--NGQVIAIKRAQQGSMQGAF--------------EFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLS--GKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSK 781          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.629e-24
Identity = 67/168 (39.88%), Postives = 95/168 (56.55%), Query Frame = 1
Query:  196 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            DG +S   +G+GG G VY+ +    +G ++A+K++    KD    +            Q R+E+  +    HRNLL L+ + A     LLVY +M NGS+   L    + +  LDW  R KIA+G A GL YLH   +P+IIHRD+K AN+LLD+  EA + DFGLAK
Sbjct:  297 DGFSSKSILGAGGFGNVYRGKF--GDGTVVAVKRL----KDVNGTSGNS---------QFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRL----KAKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAK 445          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.629e-24
Identity = 69/183 (37.70%), Postives = 99/183 (54.10%), Query Frame = 1
Query:  196 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRR-ELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYNFNVA 741
            D      KIG GG G VYK EL  S GK+IA+K++              S    +  R+  +EI  +  ++H NL+ L       +  +LVYE+++N  L   L    +  R +LDW  R KI LG+A GL +LH     +I+HRD+K +NVLLD D+ A+I+DFGLAK     NT+ +  +A
Sbjct:  676 DNFDVTRKIGEGGFGSVYKGEL--SEGKLIAVKQL--------------SAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIA 842          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.629e-24
Identity = 67/161 (41.61%), Postives = 96/161 (59.63%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQ-GRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            +GSGG G VYK EL   +G  IA+K++            E+  +  K   + +SEI  + ++RHR+L+ LL +    +  LLVYE+M  G+L   L + S+ G + L W  R  +AL VA G+EYLH   +   IHRDLKP+N+LL DDM A++ADFGL +
Sbjct:  594 LGSGGFGVVYKGEL--HDGTKIAVKRM------------ENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 740          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.629e-24
Identity = 73/187 (39.04%), Postives = 102/187 (54.55%), Query Frame = 1
Query:  184 LEKEDGLASLEK-IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYNFNVA 741
            LEK     S +K +G GG G V+   LP  NGK +A+K+++   +D  E              +  +E+N +  I+H+NL+ LL         LLVYE++ N SL   L D SQ +  L+W  R  I LG A GL YLH     RIIHRD+K +NVLLDD +  +IADFGLA+   +  T+ +  +A
Sbjct:  308 LEKATDYFSHKKMLGQGGNGTVFLGILP--NGKNVAVKRLVFNTRDWVE--------------EFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSK-VLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIA 477          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.352e-24
Identity = 77/237 (32.49%), Postives = 123/237 (51.90%), Query Frame = 1
Query:   16 AGWISGFIAGAIAGTISGFV-FSVLFKLIL--------AAVRGGSRDSGPAIFSPLIKKAEDLAFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            +G  +G +AG + G+++  V  + +  LI+        +AV    R S  ++    +K           D   S  +IG GG G+VYK  L   +G ++AIK+             ++  L  +K  +  +EI  + ++ HRNL+ LL         +LVYE+M+NG+L+D  N   + +  LD+  R +IALG A G+ YLH   NP I HRD+K +N+LLD    A++ADFGL++
Sbjct:  554 SGLSNGAVAGIVLGSVAAAVTLTAIIALIIMRKRMRGYSAVARRKRSSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTL--GSGTVVAIKRA------------QEGSLQGEK--EFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRD--NISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSR 772          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.352e-24
Identity = 63/160 (39.38%), Postives = 94/160 (58.75%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            IG GG G VYK  +   +GK+ A+K+++              KL     R    E+  +G I+HR L+ L  +   P   LL+Y+++  GSL + L++  +   +LDW +R  I +G A GL YLH   +PRIIHRD+K +N+LLD ++EAR++DFGLAK
Sbjct:  312 IGCGGFGTVYKLAM--DDGKVFALKRIL--------------KLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERGE---QLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAK 452          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.352e-24
Identity = 69/168 (41.07%), Postives = 97/168 (57.74%), Query Frame = 1
Query:  196 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            D  +   ++G GG G VYK    G  G+ IA+K++      +    + DS+  N        EI  + +++HRNL+ LL         +LVYEF+KN SL + + D+ + R+ LDW  R+K+  GVA GL YLH     RIIHRDLK +N+LLD +M  +IADFGLAK
Sbjct:  359 DNFSPENELGRGGFGSVYKGVFSG--GQEIAVKRL------SCTSGQGDSEFKN--------EILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKK-RQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAK 509          
The following BLAST results are available for this feature:
BLAST of CX296830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 362
Match NameE-valueIdentityDescription
CRK2_ARATH4.310e-2438.51Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
CRK17_ARATH4.310e-2433.33Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
Y5977_ARATH5.629e-2440.63Probable leucine-rich repeat receptor-like protein... [more]
Y2239_ARATH5.629e-2439.88Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH5.629e-2437.70Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH5.629e-2441.61Probable receptor protein kinase TMK1 OS=Arabidops... [more]
CRK42_ARATH5.629e-2439.04Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
Y1684_ARATH7.352e-2432.49Probable LRR receptor-like serine/threonine-protei... [more]
FEI1_ARATH7.352e-2439.38LRR receptor-like serine/threonine-protein kinase ... [more]
CRK28_ARATH7.352e-2441.07Cysteine-rich receptor-like protein kinase 28 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05803C09SK FerrChloL1 Citrus clementina cDNA clone C05803C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296830 ID=CX296830; Name=CX296830; organism=Citrus clementina; type=EST; length=742bp
AAGGGAAAGAAGGCAGCTGGGTGGATTTCAGGATTTATTGCTGGAGCAAT
AGCGGGTACTATTTCTGGGTTCGTGTTTTCTGTTCTTTTTAAGCTAATCT
TGGCGGCGGTAAGGGGTGGAAGTAGAGATTCTGGCCCAGCAATCTTTAGT
CCATTAATCAAGAAAGCTGAGGACTTAGCTTTCTTGGAAAAAGAAGATGG
TCTTGCTTCGTTGGAGAAAATAGGATCAGGTGGATGCGGAGAAGTTTACA
AAGCTGAGCTACCTGGAAGCAATGGAAAGATGATTGCTATTAAGAAGGTT
ATTCAACCTCCAAAGGATGCCGCAGAATTGACTGAAGAAGATAGTAAGTT
ACTGAACAAGAAAATGAGGCAAATTCGGTCTGAGATTAACACTGTGGGTC
AAATTAGGCACAGGAATCTTCTCCCTCTGCTGGCTCATATGGCCAGGCCT
GACTGCCACTTACTGGTGTACGAATTCATGAAGAACGGAAGTTTACAGGA
CATTCTAAATGATGTCTCGCAAGGAAGAAGAGAATTAGACTGGCTAGCTA
GGCATAAGATCGCATTGGGAGTAGCTTGCGGGCTTGAGTATCTGCATATA
AGCCACAACCCTCGCATAATCCACAGAGATCTCAAGCCAGCGAACGTGCT
TCTTGACGATGATATGGAAGCCAGGATCGCTGATTTTGGGCTTGCAAAGG
CATGCCTGATGCACAACACATATTACAACTTCAATGTGGCCG
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