CX296851

Overview
NameCX296851
Unique NameCX296851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_SHEON (Fructose-1,6-bisphosphatase class 1 OS=Shewanella oneidensis GN=fbp PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 66/209 (31.58%), Postives = 97/209 (46.41%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFGVWPGDK--LTGVT----GRDQVAAAMGIYGPRTTYVIAIKD-------FPGTHEFLLLDEGKWQHVKETTEIGEGKMFSPGNLRATFDNPDYDKLINYYV--KQKYTLRYTGGMVPDVNQIIVKEKGIFTNVTS---PSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +D N  VGTIF V P  +  LT  +    GR+Q+AA   +YGP T   +            P T+EFLL +      +   T      M +     A       D L+      ++ + +R+   MV DV++++ +  GIFT  T    P    KLRL++E  P+  L+E AGG +S G  ++LD     +  R  V  GS NE+
Sbjct:  107 GSSNIDINSLVGTIFSVLPAPQGELTEASFLQSGRNQLAAGYVLYGPSTMLALTTGQGVQLFTLHPETNEFLLTNAT--MSISPDTSEFAINMSNQRFWEAPMQTYIADLLLGKIGPREKSFNMRWIAAMVGDVHRVLSRG-GIFTYPTDNKDPKKPYKLRLMYEANPMAFLVEQAGGKASTGYETILDIQPTQIHQRVAVILGSANEV 312          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_SHEDO (Fructose-1,6-bisphosphatase class 1 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fbp PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 67/213 (31.46%), Postives = 102/213 (47.89%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFGVWPGDKLTGV--------TGRDQVAAAMGIYGPRTTYVIAIKDF-------PGTHEFLLLDEGKWQHVKETTEIGEG--KMFSPGNLRATFDNPDYDKLINYYVKQK--YTLRYTGGMVPDVNQIIVKEKGIFT---NVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +D N  VGTIF V P    TG         +GR Q+AA   +YGP T   +            P T EFLL D      +  + + GE    M +     A       D L+     ++  + +R+   MV DV++++ +  GIFT   +  +P+   KLRL++E  P+  L+E AGG +S+G  ++LD   +++  R  V  GS NE+
Sbjct:  107 GSSNIDINSLVGTIFSVLPAP--TGPLTEQSFLQSGRKQLAAGYVLYGPSTMLALTTGQGTQLFTLNPDTQEFLLTDAA----MAISPDTGEFAINMSNQRFWEAPMQTYIADLLLGDIGPREKPFNMRWIAAMVGDVHRVLSRG-GIFTYPADNKNPNKPYKLRLMYEANPMAFLVEQAGGKASNGYETILDITPSEIHQRVAVILGSANEV 312          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_METC4 (Fructose-1,6-bisphosphatase class 1 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=fbp PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 58/217 (26.73%), Postives = 102/217 (47.00%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFG---VWPGDKLTG---VTGRDQVAAAMGIYGPRTTYVIAIKD-------------FPGTHEFLLLDEGKWQHVKETTEI----GEGKMFSPGNLRATFDNPDYDKLINYYVKQKYTLRYTGGMVPDVNQIIVKEKGIFT---NVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +     VGTIFG   V PG+         G  Q AA   +YGP TT+V+ + +             F  TH+ + +     ++    + +    G  K +    LR +    D D          + +R+T  +V D  +++++  G+F    +     ++ +LRLL+E AP+  LIE AGG ++DG+  +L++V   + +R+ + +GS  E+
Sbjct:  115 GSSNIGVGMVVGTIFGIRPVTPGEDPNASFLTPGTTQTAAGFVVYGPATTFVVTLGNGTRIFTLDRTDNVFRLTHDAMKIVPSASEYAINASNVRHWDGPVKSYIEDCLRGSEGPRDRD----------FNMRWTAALVADAQRVLIRG-GVFLYPGDNRKGYAQGRLRLLYETAPIAFLIEQAGGGATDGQGRILERVATKIHERSPLVFGSTEEV 320          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_HELPH (Fructose-1,6-bisphosphatase class 1 OS=Helicobacter pylori (strain HPAG1) GN=fbp PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 54/204 (26.47%), Postives = 105/204 (51.47%), Query Frame = -1
Query:  126 GSSIVDTNFTVGTIFGVWPGDKLTGVTGRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDEGKWQHVKETTEIGEGKMFSPGNLRATFDNPDYDKLINYYVKQKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPSSKAKLRLLFEVAPLGLLIENAGG----YSSDGKISVLDKVINDLDDRTQVAYGSKNEIIRFEETLYG 725
            GSS+++ NF VGTI G++  D       ++ VA+   ++G +   ++A+++    + +    + K+  ++      +GK+ + G  +  F +    K +  +  + Y LRY+G MV DV+ +++K+ G+F+       + KLR LFEV PL L+IE A G    +    K  +L++ +    ++++    S +E    E+ L G
Sbjct:  100 GSSVMEANFLVGTIIGIYEKD----YKAQNLVASLYVVFGHKIELMVALEE---VYRYAFY-QNKFHFIETIVLENKGKIVASGGNQKDF-SLGLKKALEGFFAENYRLRYSGSMVADVHHVLIKKGGMFS-----YPQKKLRKLFEVFPLALIIEKAKGEAFYFDKGVKKRLLEQSVESYHEKSECYLASPHEAQILEKHLKG 289          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_SYNJA (Fructose-1,6-bisphosphatase class 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=fbp PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 63/213 (29.58%), Postives = 101/213 (47.42%), Query Frame = -1
Query:  123 GSSIVDTNFTVGTIFGVW--------PGDKLTGVTGRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDEGKWQHVKETTEIGEGKMFSPGNLRATFDNPDYDKLINY--YVKQK--YTLRYTGGMVPDVNQIIVKEKGIFTNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIRFEETLYGS 725
            GSS +D N +VG+IF V           ++     GR Q+AA   +YGP T  V ++    G H F L D    + +   +++   +  S  +L   +     + + NY  YV ++  YT RY+G +V D ++I+++        T    + KLRL++E  PL  L E AGG ++ G  ++LD V   L  R  +  GS+  +      L GS
Sbjct:  120 GSSNIDANLSVGSIFSVLHPLEDRPEADNQDLLQPGRRQLAAGYILYGPSTQLVYSVGK--GVHSFTL-DPSLGEFILSKSDLRIPERGSVYSLNEGYFCQWSEGIQNYVRYVHRRDGYTARYSGALVADFHRILLQGGVYLYPGTRQKPEGKLRLMYEANPLAFLAEQAGGVATTGTEAILDIVPQSLHQRVPLIIGSRKNVEEVLRCLEGS 329          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_SHEAM (Fructose-1,6-bisphosphatase class 1 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fbp PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 65/214 (30.37%), Postives = 103/214 (48.13%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFGVWPG------DKLTGVTGRDQVAAAMGIYGPRTTYVIA----IKDF---PGTHEFLLLDEGKWQHVKETTEIGEGKMFSPGNLRATFDNPDYDKLINYYVKQK-------YTLRYTGGMVPDVNQIIVKEKGIFTNVTS---PSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +D N  VGTIF V P       ++     GR Q+AA   +YGP T   +     ++ F   P + ++LL  +G    V+ + + GE   F+       F  P     I   ++ K       + +R+   MV DV++++ +  G+FT  T    P    KLRL++E  P+  L+E AGG +S G  ++LD   +++  R  V  GS NE+
Sbjct:  107 GSSNIDINSLVGTIFSVLPAPSGDVSEQSFLQPGRKQLAAGYVLYGPSTMLALTTGQGVQLFTLDPVSGDYLLTVDG----VQISKDTGE---FAINMSNQRFWEPGMQAYIADLIQGKEGPRGKNFNMRWIAAMVGDVHRVLCRG-GLFTYPTDTKDPKKPFKLRLMYEANPMAFLVEQAGGKASTGYETILDIAPSEIHQRVAVILGSANEV 312          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_PELPB (Fructose-1,6-bisphosphatase class 1 OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=fbp PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 66/219 (30.14%), Postives = 102/219 (46.58%), Query Frame = -1
Query:  138 GSSIVDTNFTVGTIFGVWP--GDKLTGVT-------GRDQVAAAMGIYGPRT-------------TYVIAIKDFPGTHEFLLLDE-GKWQHVKETTEIGEGKMFSPGNLRATFDNPDYDKLINYYVKQKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIRFEE 725
            GSS +D N +VGTIF ++   GD     +       G +QVAA   IYG                TY   I +F  +HE ++  + GK+  + E    G    F+ G  R      DY K  +    + Y+ RY G +V D ++ ++         T+   K KLRL++E  PL  + E AGG +++G+  +LD    +L  RT +  GS +++I  EE
Sbjct:  117 GSSNIDVNVSVGTIFSIYKLKGDDPGKASLSDCLQHGYEQVAAGYVIYGSSVVMVYTTGHGVHGFTYDPTIGEFLLSHENIITPKSGKYYSINE----GSYAQFNEGTKRYL----DYIKEEDPATNRPYSTRYIGSLVADFHRNLLTGGVFVYPPTTKHLKGKLRLMYEANPLAFICEQAGGRATNGRDRILDIQPLELHQRTPLYIGSVDDVILAEE 327          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_NEIMB (Fructose-1,6-bisphosphatase class 1 OS=Neisseria meningitidis serogroup B GN=fbp PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 61/210 (29.05%), Postives = 101/210 (48.10%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFGVWPGDKLTGV--------TGRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDEGKWQHVKETTEIGEG-KMFSPGNLRATFDNPDYDKLINYYVK-------QKYTLRYTGGMVPDVNQIIVKEKGIF---TNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +D N +VGTIF +   +K  G         TGR Q+AA   +YGP+T  V       G + F L  E ++   KE  ++ E  K F+          P   + I+  +        + Y +R+   MV ++++I+++  G+F    +   P+   KLRL++E  P+ L++E AG  +S+   ++LD    +L  R  V  GS  E+
Sbjct:  111 GSSNIDVNISVGTIFSIL--EKPEGALATESFLQTGRQQLAAGYVLYGPQTQLVFTFGH--GVYMFTLNAENEFVLTKENPKVPESTKEFAINMSNRRHWLPPVQQYIDELLAGETGTRGKNYNMRWVASMVAEIHRILMR-GGVFMYPQDKRDPAKPGKLRLMYEANPMSLILEQAGASASNAYQAMLDIQPENLHQRVAVFMGSSEEV 315          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_NEIG2 (Fructose-1,6-bisphosphatase class 1 OS=Neisseria gonorrhoeae (strain NCCP11945) GN=fbp PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 61/208 (29.33%), Postives = 99/208 (47.60%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFGVW--PGDKLTGV----TGRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDEGKWQHVKETTEIGEG-KMFSPGNLRATFDNPDYDKLINYYVK-------QKYTLRYTGGMVPDVNQIIVKEKGIF---TNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +D N +VGTIF +   P   L       TGR Q+AA   +YGP+T  V       G + F L  E ++   KE  ++ E  K F+          P   + ++  +        + Y +R+   MV ++++I+++  G+F    +   PS   KLRL++E  P+ L++E AG  +S+   ++LD     L  R  V  GS  E+
Sbjct:  111 GSSNIDVNISVGTIFSILAKPEGALATESFLQTGRQQLAAGYVLYGPQTQLVFTFGH--GVYVFTLNAENEFVLTKENPKVPESTKEFAINMSNRRHWLPPVQQYVDELLAGETGTRGKNYNMRWVASMVAEIHRILMR-GGVFMYLQDKRDPSKPGKLRLMYEANPMALILEQAGASASNAYQAMLDIQPESLHQRVAVIMGSSEEV 315          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_NEIG1 (Fructose-1,6-bisphosphatase class 1 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=fbp PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 61/208 (29.33%), Postives = 99/208 (47.60%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFGVW--PGDKLTGV----TGRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDEGKWQHVKETTEIGEG-KMFSPGNLRATFDNPDYDKLINYYVK-------QKYTLRYTGGMVPDVNQIIVKEKGIF---TNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +D N +VGTIF +   P   L       TGR Q+AA   +YGP+T  V       G + F L  E ++   KE  ++ E  K F+          P   + ++  +        + Y +R+   MV ++++I+++  G+F    +   PS   KLRL++E  P+ L++E AG  +S+   ++LD     L  R  V  GS  E+
Sbjct:  111 GSSNIDVNISVGTIFSILAKPEGALATESFLQTGRQQLAAGYVLYGPQTQLVFTFGH--GVYVFTLNAENEFVLTKENPKVPESTKEFAINMSNRRHWLPPVQQYVDELLAGETGTRGKNYNMRWVASMVAEIHRILMR-GGVFMYLQDKRDPSKPGKLRLMYEANPMALILEQAGASASNAYQAMLDIQPESLHQRVAVIMGSSEEV 315          
The following BLAST results are available for this feature:
BLAST of CX296851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 296
Match NameE-valueIdentityDescription
F16PA_SHEON8.670e-1431.58Fructose-1,6-bisphosphatase class 1 OS=Shewanella ... [more]
F16PA_SHEDO8.670e-1431.46Fructose-1,6-bisphosphatase class 1 OS=Shewanella ... [more]
F16PA_METC48.670e-1426.73Fructose-1,6-bisphosphatase class 1 OS=Methylobact... [more]
F16PA_HELPH8.670e-1426.47Fructose-1,6-bisphosphatase class 1 OS=Helicobacte... [more]
F16PA_SYNJA1.132e-1329.58Fructose-1,6-bisphosphatase class 1 OS=Synechococc... [more]
F16PA_SHEAM1.132e-1330.37Fructose-1,6-bisphosphatase class 1 OS=Shewanella ... [more]
F16PA_PELPB1.132e-1330.14Fructose-1,6-bisphosphatase class 1 OS=Pelodictyon... [more]
F16PA_NEIMB1.132e-1329.05Fructose-1,6-bisphosphatase class 1 OS=Neisseria m... [more]
F16PA_NEIG21.132e-1329.33Fructose-1,6-bisphosphatase class 1 OS=Neisseria g... [more]
F16PA_NEIG11.132e-1329.33Fructose-1,6-bisphosphatase class 1 OS=Neisseria g... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05803E06SK FerrChloL1 Citrus clementina cDNA clone C05803E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296851 ID=CX296851; Name=CX296851; organism=Citrus clementina; type=EST; length=728bp
GAGGTTGTACTTCTATATTGATAGTTTAAAGTTCTTTGCATATCGAAGAA
AAAGAAACACATGAAAGACAACATTATCATTTAAGCAGCTGCTCCAACAG
GAACCCCGCCCTTAAGCCTTGAAGATCCGTATAGAGTTTCTTCAAACCGG
ATAATTTCATTCTTGGAGCCATAGGCAACTTGAGTTCTATCATCAAGATC
GTTTATCACTTTGTCTAGAACCGATATTTTTCCATCGCTACTGTAACCTC
CAGCATTCTCAATCAACAATCCCAAAGGAGCTACCTCAAATAACAGCCTC
AACTTGGCCTTTGAAGAGGGGGATGTTACATTAGTGAAGATACCTTTCTC
TTTAACGATGATCTGATTGACATCTGGCACCATTCCACCTGTGTATCTCA
ATGTGTACTTCTGTTTTACGTAGTAGTTGATCAACTTGTCATAATCAGGA
TTGTCAAAAGTGGCTCTCAAATTTCCAGGGGAGAACATTTTTCCTTCGCC
AATCTCTGTGGTCTCTTTGACATGTTGCCATTTTCCTTCATCAAGAAGAA
GGAACTCGTGTGTTCCCGGAAAATCCTTAATTGCAATAACATATGTGGTT
CGAGGACCATAAATTCCCATGGCTGCGGCAACTTGATCTCTTCCTGTGAC
CCCAGTTAATTTGTCTCCAGGCCACACCCCAAATATGGTTCCTACTGTGA
AGTTTGTGTCGACAATGCTAGATCCCAT
back to top