CX296851

Overview
NameCX296851
Unique NameCX296851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_METEP (Fructose-1,6-bisphosphatase class 1 OS=Methylobacterium extorquens (strain PA1) GN=fbp PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 58/217 (26.73%), Postives = 102/217 (47.00%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFG---VWPGDKLTG---VTGRDQVAAAMGIYGPRTTYVIAIKD-------------FPGTHEFLLLDEGKWQHVKETTEI----GEGKMFSPGNLRATFDNPDYDKLINYYVKQKYTLRYTGGMVPDVNQIIVKEKGIFT---NVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +     VGTIFG   V PG+         G  Q AA   +YGP TT+V+ + +             F  TH+ + +     ++    + +    G  K +    LR +    D D          + +R+T  +V D  +++++  G+F    +     ++ +LRLL+E AP+  LIE AGG ++DG+  +L++V   + +R+ + +GS  E+
Sbjct:  115 GSSNIGVGMVVGTIFGIRPVTPGEDPNASFLTPGTTQTAAGFVVYGPATTFVVTLGNGTRIFTLDRTDNVFRLTHDAMKIVPSASEYAINASNVRHWDGPVKSYIEDCLRGSEGPRDRD----------FNMRWTAALVADAQRVLIRG-GVFLYPGDNRKGYAQGRLRLLYETAPIAFLIEQAGGGATDGQGRILERVAAKIHERSPLVFGSTEEV 320          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16A3_METPP (Fructose-1,6-bisphosphatase class 1 3 OS=Methylibium petroleiphilum (strain PM1) GN=fbp3 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 62/217 (28.57%), Postives = 99/217 (45.62%), Query Frame = -1
Query:  141 GSSIVDTNFTVGTIFGVW----------PGDKLTGVTGRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDE-GKWQHVKETTEIGEG-KMFSPGNLRATFDNPDYDKLINYYVKQK-------YTLRYTGGMVPDVNQIIVKEKGIFT---NVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIRFE 725
            GSS +D N TVG+IF +           P D L    G   V     IYGP T  V+ + D  GTH F L  + G+W        I E  + F+     + F  P   + ++  +          + +R+   +V + ++I+++  G+F    +   P+   +LRLL+E  P+  LIE AGG +S G+  +L+    D+  R    +GS  E+ R E
Sbjct:  120 GSSNIDVNVTVGSIFAIHRAPQPRQDPQPQDYLQ--PGTTMVCGGYAIYGPSTMLVLTLGD--GTHAFTLDPQLGEWVLSHPNLRIPEKTREFAINASNSRFWEPAVKRYVDECLAGSTGPRGTDFNMRWIASLVAETHRILMRG-GVFLYPRDSKDPNKAGRLRLLYEANPISFLIEQAGGMASTGRKRLLEVQPEDIHQRIGFVFGSTEEVARIE 331          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_VIBC3 (Fructose-1,6-bisphosphatase class 1 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fbp PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 71/215 (33.02%), Postives = 95/215 (44.19%), Query Frame = -1
Query:  132 GSSIVDTNFTVGTIFGVWPGDKLTGVT---------GRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDE-GKWQHVKETTEIGE-GKMFS--PGN-LRATFDNPDYDKLINYYVKQK---YTLRYTGGMVPDVNQIIVKEKGIFTNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIRFEETL 725
            GSS +D N +VGTIF ++      G           G  QVAA   IYG  T  V    +  G + F      G +    E   I E GK++S   GN +R       Y K     V +    YT RY G +V D ++ ++K        T      KLRLL+E  P+  LIE AGG +SDG   ++D    +L  R     GSKN + + EE L
Sbjct:  119 GSSNIDVNVSVGTIFSIYRRVSPVGTPPTQEDFLQPGNKQVAAGYVIYGSSTMLVYTTGN--GVNGFTYDPSLGTFYLSHENMRIPENGKIYSINEGNYIRFPTGVKKYIKFCQENVPEDGRPYTSRYIGSLVADFHRNLLKGGIYLYPSTQSHPNGKLRLLYECNPMAFLIEQAGGLASDGVHRIMDIKPTELHQRVPFFVGSKNMVHKVEEFL 331          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_PSYA2 (Fructose-1,6-bisphosphatase class 1 OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fbp PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 67/213 (31.46%), Postives = 103/213 (48.36%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFGVWPGDKLTGVT--------GRDQVAAAMGIYGPRTTYVIAIKDF-------PGTHEFLLLDEGKWQHVKETTEIGEGKMFSPGNLRATFDNPDY-DKLINYYVKQK---YTLRYTGGMVPDVNQIIVKEKGIFTNV--TSPSSKA-KLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +D N  VGTIF + P      V+        G  Q+AA   +YG  T   + I D        P T++++L++E    +V    +  E  + +            Y D+LI   +  +   +  R+   MV DV++I+ +  G+FT    T  ++KA KLRL++E  P+ LLIE AGG ++D    +LD    D+  R  V  GSKNE+
Sbjct:  107 GSSNIDINMAVGTIFSILPYQHQGKVSENSDFLQAGNQQLAAGYLLYGTSTVLALTITDNVVMFSLDPDTNDYVLIEE----NVTVDADTSEYAINASNYRYWRAPMQQYIDELIAGEIGVRGRDFNTRWVAAMVGDVHRILCRG-GLFTYPFDTKYANKAGKLRLMYEANPMSLLIERAGGGATDAVNRILDIEPTDIHQRVPVVLGSKNEV 314          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_CYTH3 (Fructose-1,6-bisphosphatase class 1 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=fbp PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 64/211 (30.33%), Postives = 96/211 (45.50%), Query Frame = -1
Query:  141 GSSIVDTNFTVGTIFGVW-------PGDKLTGV-TGRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDE-GKWQHVKETTEIGEGKMFSPGNLRATFDNPDYDKLINYYVK-------QKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIRFE 725
            GSS +D N  +G+IF ++       PG+ +  +  G  QVAA   IYG  T  V    D  G + F L    G++       +I E       N     D P   +   YY K       + Y+ RY G MV D ++ ++K        T+     KLRL++E  PL  ++E AGG + DG+  +LD    ++  RT +  GSKN + + E
Sbjct:  123 GSSNIDVNVAIGSIFSIYRRVSESGPGETVDCMQVGNKQVAAGYIIYGSSTMMVYTTGD--GVNGFTLDPSIGEFCLSHPNLKIPEDGFIYSVNEGNYADFPREIQEYIYYCKTPDFETSRPYSSRYIGSMVADFHRNLIKGGIFMYPATAKYPLGKLRLMYECNPLAFIVEQAGGKAIDGEGRILDIEPTNIHQRTGIIIGSKNMVEKVE 331          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_CHLP8 (Fructose-1,6-bisphosphatase class 1 OS=Chlorobaculum parvum (strain NCIB 8327) GN=fbp PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 66/215 (30.70%), Postives = 100/215 (46.51%), Query Frame = -1
Query:  138 GSSIVDTNFTVGTIFGVW--PGDKLTGVT-------GRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLL---LDEGKWQHVKETTEIGEGKMFSPGNLRATFDNPDYDKLINYYVKQK-------YTLRYTGGMVPDVNQIIVKEKGIFTNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIRFEE 725
            GSS +D N +VGTIF ++    D  +  +       G DQVAA   IYG  ++ ++      G H F     + E    H   TT    GK +S  N  +  +  D  KL   Y+K++       Y+ RY G  V D ++ ++         T      KLRL++E  P+  + E AGG ++DG   +LD    +L  RT +  GSKN+++  EE
Sbjct:  117 GSSNIDVNVSVGTIFSIYRLKSDNPSQASIEDCLQKGADQVAAGYVIYG--SSVMLVYTTGHGVHGFTFDQTVGEFLLSHENITTP-EHGKYYSV-NEGSWNEFHDGTKLFLDYLKEEDKATGRPYSTRYIGSFVADFHRNLLTGGVFIYPATKKHKNGKLRLMYEANPMAFICEQAGGRATDGHRRILDIEPVELHQRTPLYIGSKNDVLIAEE 327          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_BURM1 (Fructose-1,6-bisphosphatase class 1 OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=fbp PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 65/219 (29.68%), Postives = 100/219 (45.66%), Query Frame = -1
Query:  147 GSSIVDTNFTVGTIFGVW---PGDKLTGVT----GRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDE-GKWQHVKETTEIGEGKMFSPGNLRATFDNPD-----YDKLINYYVK----------QKYTLRYTGGMVPDVNQIIVKEKGIF---TNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIR 725
            GSS +D N ++GTIF V     G + T  +    G  QVAA   +YGP+T +V+   +  G + F L  E G W   +   +I       P + R    N       YD +  Y  +            + +R+   MV DV++I+    GIF    +  +P    KLRL++E  P+  ++E AGG ++ G   +++     L  R  V  GSKNE+ R
Sbjct:  120 GSSNIDVNVSIGTIFSVLRCPDGKQATEESFLQPGTQQVAAGYAVYGPQTVFVLTTGN--GVNCFTLDREVGSWVLTQSNMQI-------PADTREYAINASNARHWYDPVKRYVDELNAGKDGPRGDNFNMRWIASMVADVHRIL-NRGGIFMYPADKRTPDRPGKLRLMYEANPMAFIVEQAGGAATTGTQRIMEVQPTGLHQRVPVFLGSKNEVER 328          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_BURCJ (Fructose-1,6-bisphosphatase class 1 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=fbp PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 65/219 (29.68%), Postives = 100/219 (45.66%), Query Frame = -1
Query:  147 GSSIVDTNFTVGTIFGVW---PGDKLTGVT----GRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDE-GKWQHVKETTEIGEGKMFSPGNLRATFDNPD-----YDKLINYYVK----------QKYTLRYTGGMVPDVNQIIVKEKGIF---TNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIR 725
            GSS +D N ++GTIF V     G + T  +    G  QVAA   +YGP+T +V+   +  G + F L  E G W   +   +I       P + R    N       YD +  Y  +            + +R+   MV DV++I+    GIF    +  +P    KLRL++E  P+  ++E AGG ++ G   +++     L  R  V  GSKNE+ R
Sbjct:  120 GSSNIDVNVSIGTIFSVLRCPDGKQATEESFLQPGTQQVAAGYAVYGPQTVFVLTTGN--GVNCFTLDREVGSWVLTQSNMQI-------PADTREYAINASNARHWYDPVKRYVDELNAGKDGPRGDNFNMRWIASMVADVHRIL-NRGGIFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGTQRIMEVQPTGLHQRVPVFLGSKNEVER 328          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16A2_LEPCP (Fructose-1,6-bisphosphatase class 1 2 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=fbp2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 62/220 (28.18%), Postives = 103/220 (46.82%), Query Frame = -1
Query:  141 GSSIVDTNFTVGTIFGVWPGDKLTGVTGRD------------QVAAAMGIYGPRTTYVIAIKDFPGTHEFLL---LDEGKWQHVKETTEIGEGKMFSPGNLRATFDNPDYDKLINYYVK-------QKYTLRYTGGMVPDVNQIIVKEKGIFT---NVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIRFE 725
            GSS +D N +VG+IF +    +    +GRD            QVAA   +YGP T  ++ + +  G   F L   L E    H   T    + + F+     A F  P   + ++  +        + + +R+   MV + ++I+++  G+F    +    S   +LRLL+E  P+G+L+E AGG +S G+  +L      L  R  + +GSKNE+ R E
Sbjct:  126 GSSNIDVNVSVGSIFSILRAPQDVIDSGRDVTEADFLQPGAAQVAAGYALYGPTTMLMLTVGN--GVAGFTLNPTLGEFMLTHANVTVP-ADTREFAINASNARFWEPPVKRYVDECLAGATGPRGKDFNMRWIASMVAEAHRILMRG-GVFMYPRDTKDASKPGRLRLLYEANPIGMLMEQAGGRASTGRQPMLGVKPTSLHQRIGLVFGSKNEVERIE 341          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_SHEB9 (Fructose-1,6-bisphosphatase class 1 OS=Shewanella baltica (strain OS195) GN=fbp PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13
Identity = 65/209 (31.10%), Postives = 100/209 (47.85%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFGVWPGD--KLTGVT----GRDQVAAAMGIYGPRTTYVIA----IKDF---PGTHEFLLLDEGKWQHVKETTEIGEGKMFSPGNLRATFDNPDYDKLINYYV--KQKYTLRYTGGMVPDVNQIIVKEKGIFTNVTS---PSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +D N  VGTIF + P    +LT  +    GR Q+AA   +YGP T   +     ++ F   P T+EFLL +      +   T+     M +     A       D L+      ++ + +R+   MV DV++++ +  GIFT  +    P    KLRL++E  P+  L+E AGG +S G  ++LD     +  R  V  GS NE+
Sbjct:  107 GSSNIDINSLVGTIFSILPAPAGELTETSFLQSGRAQLAAGYVLYGPSTMLALTTGQGVQLFTLDPETNEFLLTNAA--MSISPETQEFAINMSNQRFWEAPMQTYIADLLLGKIGPREKSFNMRWIAAMVGDVHRVLSRG-GIFTYPSDNKDPKKPYKLRLMYEANPMAFLVEQAGGKASTGYETILDITPTHIHQRVAVILGSANEV 312          
The following BLAST results are available for this feature:
BLAST of CX296851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 296
Match NameE-valueIdentityDescription
F16PA_METEP1.479e-1326.73Fructose-1,6-bisphosphatase class 1 OS=Methylobact... [more]
F16A3_METPP1.479e-1328.57Fructose-1,6-bisphosphatase class 1 3 OS=Methylibi... [more]
F16PA_VIBC31.931e-1333.02Fructose-1,6-bisphosphatase class 1 OS=Vibrio chol... [more]
F16PA_PSYA21.931e-1331.46Fructose-1,6-bisphosphatase class 1 OS=Psychrobact... [more]
F16PA_CYTH31.931e-1330.33Fructose-1,6-bisphosphatase class 1 OS=Cytophaga h... [more]
F16PA_CHLP81.931e-1330.70Fructose-1,6-bisphosphatase class 1 OS=Chlorobacul... [more]
F16PA_BURM11.931e-1329.68Fructose-1,6-bisphosphatase class 1 OS=Burkholderi... [more]
F16PA_BURCJ1.931e-1329.68Fructose-1,6-bisphosphatase class 1 OS=Burkholderi... [more]
F16A2_LEPCP1.931e-1328.18Fructose-1,6-bisphosphatase class 1 2 OS=Leptothri... [more]
F16PA_SHEB92.523e-1331.10Fructose-1,6-bisphosphatase class 1 OS=Shewanella ... [more]

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Properties
Property NameValue
Genbank descriptionC05803E06SK FerrChloL1 Citrus clementina cDNA clone C05803E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296851 ID=CX296851; Name=CX296851; organism=Citrus clementina; type=EST; length=728bp
GAGGTTGTACTTCTATATTGATAGTTTAAAGTTCTTTGCATATCGAAGAA
AAAGAAACACATGAAAGACAACATTATCATTTAAGCAGCTGCTCCAACAG
GAACCCCGCCCTTAAGCCTTGAAGATCCGTATAGAGTTTCTTCAAACCGG
ATAATTTCATTCTTGGAGCCATAGGCAACTTGAGTTCTATCATCAAGATC
GTTTATCACTTTGTCTAGAACCGATATTTTTCCATCGCTACTGTAACCTC
CAGCATTCTCAATCAACAATCCCAAAGGAGCTACCTCAAATAACAGCCTC
AACTTGGCCTTTGAAGAGGGGGATGTTACATTAGTGAAGATACCTTTCTC
TTTAACGATGATCTGATTGACATCTGGCACCATTCCACCTGTGTATCTCA
ATGTGTACTTCTGTTTTACGTAGTAGTTGATCAACTTGTCATAATCAGGA
TTGTCAAAAGTGGCTCTCAAATTTCCAGGGGAGAACATTTTTCCTTCGCC
AATCTCTGTGGTCTCTTTGACATGTTGCCATTTTCCTTCATCAAGAAGAA
GGAACTCGTGTGTTCCCGGAAAATCCTTAATTGCAATAACATATGTGGTT
CGAGGACCATAAATTCCCATGGCTGCGGCAACTTGATCTCTTCCTGTGAC
CCCAGTTAATTTGTCTCCAGGCCACACCCCAAATATGGTTCCTACTGTGA
AGTTTGTGTCGACAATGCTAGATCCCAT
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