CX296851

Overview
NameCX296851
Unique NameCX296851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16A1_GRAFK (Fructose-1,6-bisphosphatase class 1 1 OS=Gramella forsetii (strain KT0803) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 64/217 (29.49%), Postives = 99/217 (45.62%), Query Frame = -1
Query:  138 GSSIVDTNFTVGTIFGVWPGDKLTGVT---------GRDQVAAAMGIYGPRTTYVIA----IKDF---PGTHEFLLLDEG-KWQHVKETTEIGEGK-MFSPGNLRATFDNPDYDKLINYYVKQKYTLRYTGGMVPDVNQIIVKEKGIFT---NVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIRFEE 725
            GSS +D + TVGTIF ++      G           G +QVAA   IYG  T  V      +  F   PG   F L     K+     T  + EG  +  P  ++       + + +N    + +T RYTG +V D ++ ++   GI+      T+P  K KLRLL+E  P+  L E AGG ++DG   +++    +L +R     G+K  + + EE
Sbjct:  119 GSSNIDVDITVGTIFSIYRRISKKGTPATLEDFLQPGINQVAAGYLIYGTSTILVYTTGNGVNGFTFDPGIGSFFLSHSDIKFPKKGNTYSVNEGNYVHFPQGIKKYIK---WVQELNEEENRPFTSRYTGSLVADFHRNMLLG-GIYLYPQGTTAP--KGKLRLLYECNPMAFLAEQAGGKATDGSRRIMELQPQELHERAPFICGNKEMVEKAEE 329          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16A1_RHOSH (Fructose-1,6-bisphosphatase class 1 1 OS=Rhodobacter sphaeroides GN=fbp1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 54/214 (25.23%), Postives = 98/214 (45.79%), Query Frame = -1
Query:  147 GSSIVDTNFTVGTIFGVWPGDKLTGVT----GRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDEGKWQHVKETTEIGEGKMFSPGNLRATFDNPDY---DKLINYYVK-----------QKYTLRYTGGMVPDVNQIIVKEKGIFT---NVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIR 725
            GSS +DTN +VGT F +WP       +    G + +AA   IYGP+   +++     GT +++L D G    V     +       P +     +  +Y    K I  Y+            + + +R+   +V + ++I+ +  G+F    +      + +LR L+E AP+  +I  AGG ++DG+  +L +  + L  RT   +GS  ++ R
Sbjct:  104 GSSNIDTNLSVGTTFAIWPAAPRPNPSFLRLGSELIAAGYVIYGPQVCMMVSFGK--GTQKYVL-DPGSRSFVL----VDRAVKVPPSSTEFAINASNYRHWPKPIRAYIDDCVAGTEGPRGRNFNMRWLASLVAETHRILARG-GVFLYPRDSRKGYEQGRLRYLYECAPIAFVITQAGGGATDGENPILGQTPSRLHARTPFVFGSAEKVAR 309          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_SODGM (Fructose-1,6-bisphosphatase class 1 OS=Sodalis glossinidius (strain morsitans) GN=fbp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 62/215 (28.84%), Postives = 93/215 (43.26%), Query Frame = -1
Query:  144 GSSIVDTNFTVGTIFGVWPGDKLTGVT---------GRDQVAAAMGIYGPRTTYVI-------AIKDFPGTHEFLLLDEG-KWQHVKETTEIGEGKMFS-PGNLRATFDNPDYDKLINYYVKQKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSK---NEIIRF 725
            GSS +D N +VGTIF ++      G           G  QVAA   +YG  T  V        A    P    F L  E  ++    +   I EG     P  ++       Y + ++    + YT RY G +V D ++ ++K        T+     KLRL +E  P+  L E AGG +SDGK  +LD   ++L  R+    G++   N++ RF
Sbjct:  114 GSSNIDVNVSVGTIFSIYRRITPLGTPVTKEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLSHESVRFPATGQMYSINEGNYIKFPNGVKKYIK---YCQEMDEATHRPYTSRYIGSLVSDFHRNLLKGGIYLYPSTATHPNGKLRLAYECNPIAFLAEQAGGKASDGKNRILDIQPHELHQRSAFFTGTESMVNDVERF 325          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_SACD2 (Fructose-1,6-bisphosphatase class 1 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fbp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 64/214 (29.91%), Postives = 99/214 (46.26%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFGVWPGDKLTGVT----------GRDQVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDEGKWQHVKETTEI---GEGKMFSPGNLRATFDNPDYD------KLINYYVK-QKYTLRYTGGMVPDVNQIIVKEKGIF---TNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +D N  +GTIF ++  + L GV           G  QV A   +YG  T  VI +    G    L LD          T +    + + F+       F  P +       KL    V+ +++ +R+   MV DV++++++  GIF   ++  +P   AKLRLL+E  P+ LLIE AGG + +    +LD     L +R  V  GS+ E+
Sbjct:  107 GSSNIDINGQIGTIFTIF--EALDGVAANSGKHFLQQGNKQVCAGYVLYGASTLMVITV---DGPTSCLTLDPATQTFSLTNTALQVPDQTQEFAVNLANERFWLPKFKSYVADLKLGEEGVRGKRFNMRWNASMVGDVHRVLMR-GGIFMYPSDTRNPKQPAKLRLLYEANPMALLIERAGGKAFNETQRILDVTPCALHERIAVILGSEQEV 314          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_PHOLL (Fructose-1,6-bisphosphatase class 1 OS=Photorhabdus luminescens subsp. laumondii GN=fbp PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 64/217 (29.49%), Postives = 92/217 (42.40%), Query Frame = -1
Query:  141 GSSIVDTNFTVGTIFGVWPGDKLTG--VTGRD-------QVAAAMGIYGPRTTYVIAIKDFPGTHEFLLLDEGKWQHVKETTEIGEGKMFSPGNLRATFDNPDYDKL---INYYVK----------QKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEIIRFE 725
            GSS +D N +VGTIF ++      G  VT +D       QVAA   +YG  T  V       G H F   D           ++     F P     + +  +Y K    +  Y+K          + YT RY G +V D ++ ++K        T+     KLRLL+E  P+  L E AGG +SDG   +LD   + L  R     GSK+ + + E
Sbjct:  116 GSSNIDVNVSVGTIFSIYRRITPIGQPVTEKDFLQPGHRQVAAGYVVYGSSTMLVYTTGC--GVHAFTY-DPSLGVFCLSHEKV----QFPPNGNMYSINEGNYIKFPMGVKKYIKYCQEQDEATQRPYTTRYIGSLVADFHRNLLKGGIYIYPSTASHPSGKLRLLYECNPMAFLAEQAGGKASDGANRILDITPSKLHQRVPFFVGSKSMVEKAE 325          
BLAST of CX296851 vs. ExPASy Swiss-Prot
Match: F16PA_ENT38 (Fructose-1,6-bisphosphatase class 1 OS=Enterobacter sp. (strain 638) GN=fbp PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11
Identity = 60/209 (28.71%), Postives = 87/209 (41.63%), Query Frame = -1
Query:  153 GSSIVDTNFTVGTIFGVWPGDKLTGVT---------GRDQVAAAMGIYGPRTTYVI-------AIKDFPGTHEFLLLDEG-KWQHVKETTEIGEGKMFS-PGNLRATFDNPDYDKLINYYVKQKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPSSKAKLRLLFEVAPLGLLIENAGGYSSDGKISVLDKVINDLDDRTQVAYGSKNEI 725
            GSS +D N +VGTIF ++      G           G  QVAA   +YG  T  V        A    P    F L  E  ++     T  I EG     P  ++       + +  +   ++ YT RY G +V D ++ ++K        T+     KLRLL+E  P+  L E AGG +SDGK  +LD     L  R     G+ + +
Sbjct:  114 GSSNIDVNVSVGTIFSIYRRVTPVGTAVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRYPEKGSTYSINEGNYIKFPNGVKKYIK---FCQEEDTPTQRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDITPESLHQRRSFFVGNNHMV 319          
The following BLAST results are available for this feature:
BLAST of CX296851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 296
Match NameE-valueIdentityDescription
F16A1_GRAFK4.027e-1129.49Fructose-1,6-bisphosphatase class 1 1 OS=Gramella ... [more]
F16A1_RHOSH5.260e-1125.23Fructose-1,6-bisphosphatase class 1 1 OS=Rhodobact... [more]
F16PA_SODGM6.869e-1128.84Fructose-1,6-bisphosphatase class 1 OS=Sodalis glo... [more]
F16PA_SACD26.869e-1129.91Fructose-1,6-bisphosphatase class 1 OS=Saccharopha... [more]
F16PA_PHOLL8.972e-1129.49Fructose-1,6-bisphosphatase class 1 OS=Photorhabdu... [more]
F16PA_ENT388.972e-1128.71Fructose-1,6-bisphosphatase class 1 OS=Enterobacte... [more]

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Properties
Property NameValue
Genbank descriptionC05803E06SK FerrChloL1 Citrus clementina cDNA clone C05803E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296851 ID=CX296851; Name=CX296851; organism=Citrus clementina; type=EST; length=728bp
GAGGTTGTACTTCTATATTGATAGTTTAAAGTTCTTTGCATATCGAAGAA
AAAGAAACACATGAAAGACAACATTATCATTTAAGCAGCTGCTCCAACAG
GAACCCCGCCCTTAAGCCTTGAAGATCCGTATAGAGTTTCTTCAAACCGG
ATAATTTCATTCTTGGAGCCATAGGCAACTTGAGTTCTATCATCAAGATC
GTTTATCACTTTGTCTAGAACCGATATTTTTCCATCGCTACTGTAACCTC
CAGCATTCTCAATCAACAATCCCAAAGGAGCTACCTCAAATAACAGCCTC
AACTTGGCCTTTGAAGAGGGGGATGTTACATTAGTGAAGATACCTTTCTC
TTTAACGATGATCTGATTGACATCTGGCACCATTCCACCTGTGTATCTCA
ATGTGTACTTCTGTTTTACGTAGTAGTTGATCAACTTGTCATAATCAGGA
TTGTCAAAAGTGGCTCTCAAATTTCCAGGGGAGAACATTTTTCCTTCGCC
AATCTCTGTGGTCTCTTTGACATGTTGCCATTTTCCTTCATCAAGAAGAA
GGAACTCGTGTGTTCCCGGAAAATCCTTAATTGCAATAACATATGTGGTT
CGAGGACCATAAATTCCCATGGCTGCGGCAACTTGATCTCTTCCTGTGAC
CCCAGTTAATTTGTCTCCAGGCCACACCCCAAATATGGTTCCTACTGTGA
AGTTTGTGTCGACAATGCTAGATCCCAT
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