CX296855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296855 vs. ExPASy Swiss-Prot
Match: NDK_BACLD (Nucleoside diphosphate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ndk PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.101e-38 Identity = 62/110 (56.36%), Postives = 82/110 (74.55%), Query Frame = -3 Query: 360 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 689 ME+TF+M+KPDGVQR L+GEI++RFE+KG L G KLM V A +HY++ + KPFFG L+++ITSGPV AM+WEGE + R +IG TNP ++ PGTIRGD + G Sbjct: 1 MEKTFVMVKPDGVQRQLIGEILLRFERKGLQLIGAKLMKVSEETAGEHYKEHNGKPFFGELVDFITSGPVFAMVWEGEDAIAVARQLIGKTNPKEALPGTIRGDFGMFVG 110 HSP 2 Score: 36.5798 bits (83), Expect = 8.101e-38 Identity = 19/37 (51.35%), Postives = 25/37 (67.57%), Query Frame = -2 Query: 253 NIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 360 NIIHGSDS ESA +EI L+F D + + ++ WIY Sbjct: 112 NIIHGSDSPESAAREINLFFKEDELVEDEKLMNQWIY 148
BLAST of CX296855 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.374e-37 Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = -3 Query: 360 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 689 +E+TF+ IKPDGVQRGLVGEI+ RFE+KGF L GLK + + AEKHY +PFF L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDL I G Sbjct: 3 VERTFLAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEGDGVILSARKLIGATKPLEAEPGTIRGDLGINIG 112 HSP 2 Score: 36.965 bits (84), Expect = 1.374e-37 Identity = 18/38 (47.37%), Postives = 21/38 (55.26%), Query Frame = -2 Query: 250 NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 360 N+IHGSD E+A EI LWF + NW S W E Sbjct: 114 NVIHGSDGPETASFEIDLWFNSSELNNWNPSDQKWRVE 151
BLAST of CX296855 vs. ExPASy Swiss-Prot
Match: NDKM_DICDI (Nucleoside diphosphate kinase, mitochondrial OS=Dictyostelium discoideum GN=ndkM PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 1.774e-37 Identity = 65/109 (59.63%), Postives = 83/109 (76.15%), Query Frame = -3 Query: 360 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 686 E++FI IK QR L+GEII RFEKKGF L G+K++ A KHYEDL+ KPFF L+++ +SG VVAM++EG+ VV+TGR +IGAT+P+QSAPGTIR DL I TG Sbjct: 73 ERSFIAIKVSSTQRRLIGEIIARFEKKGFKLVGIKILVPTPEHAAKHYEDLNKKPFFNGLVKFFSSGAVVAMVFEGKDVVRTGRVLIGATDPSQSAPGTIRFDLCIETG 181 HSP 2 Score: 41.2022 bits (95), Expect = 1.774e-37 Identity = 21/31 (67.74%), Postives = 23/31 (74.19%), Query Frame = -2 Query: 271 NIIHGSDSVESAQKEIALWFPDGPI-NWQSS 360 NIIHGSDS ESA EIALWF + I NW S+ Sbjct: 183 NIIHGSDSNESAAHEIALWFKEDEIANWVST 213
BLAST of CX296855 vs. ExPASy Swiss-Prot
Match: NDK_STAS1 (Nucleoside diphosphate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=ndk PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.332e-37 Identity = 63/110 (57.27%), Postives = 78/110 (70.91%), Query Frame = -3 Query: 360 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 689 ME+TF+MIKPD VQR L+GEII R E+KG L G K MTV + AE+HY + + KPF+ LI +ITS PV AM+ EGE V R IIG TNP+++ PGTIRGDL + G Sbjct: 1 MERTFLMIKPDAVQRNLIGEIISRIERKGLKLVGGKFMTVPQSLAEEHYAEHTDKPFYKHLISFITSAPVFAMVVEGEDAVHVARHIIGKTNPSEATPGTIRGDLGLTVG 110 HSP 2 Score: 45.4394 bits (106), Expect = 2.332e-37 Identity = 23/38 (60.53%), Postives = 25/38 (65.79%), Query Frame = -2 Query: 250 NIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 360 NIIHGSDSVESA KEI LWF D + S W+YE Sbjct: 112 NIIHGSDSVESANKEINLWFKADELSEYSESRESWLYE 149
BLAST of CX296855 vs. ExPASy Swiss-Prot
Match: NDK_PELTS (Nucleoside diphosphate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ndk PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.958e-37 Identity = 65/110 (59.09%), Postives = 82/110 (74.55%), Query Frame = -3 Query: 360 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 689 ME+T++MIKPDGVQRGLVGEII RFEK+GF + GLK++ + R AEKHY + KPFF L+ YITS PVVAM+ EG+ V R ++GAT+P ++APGTIRG I G Sbjct: 1 MERTYLMIKPDGVQRGLVGEIIARFEKRGFKIVGLKMIRIGRELAEKHYGEHKGKPFFEPLVGYITSSPVVAMVIEGKNAVGAAREMMGATDPLKAAPGTIRGTYGIDIG 110 HSP 2 Score: 39.6614 bits (91), Expect = 3.958e-37 Identity = 20/38 (52.63%), Postives = 26/38 (68.42%), Query Frame = -2 Query: 250 NIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 360 N+IHGSDS SAQ+EIAL+F D + + L W+YE Sbjct: 112 NVIHGSDSPASAQREIALFFSADELMEYGLELDRWVYE 149
BLAST of CX296855 vs. ExPASy Swiss-Prot
Match: NDK_PROM2 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ndk PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 5.153e-37 Identity = 67/109 (61.47%), Postives = 82/109 (75.23%), Query Frame = -3 Query: 360 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 686 E+TFI IKPDGVQRG V EII RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI G Sbjct: 4 ERTFIAIKPDGVQRGYVAEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIG 112 HSP 2 Score: 34.6538 bits (78), Expect = 5.153e-37 Identity = 16/35 (45.71%), Postives = 23/35 (65.71%), Query Frame = -2 Query: 259 NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 360 NIIHGSD ++A+ EI LWF + + W++S W Sbjct: 114 NIIHGSDGEDTAKFEIDLWFNEEELCEWETSDAKW 148
BLAST of CX296855 vs. ExPASy Swiss-Prot
Match: NDK_EXISA (Nucleoside diphosphate kinase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=ndk PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 5.173e-37 Identity = 62/106 (58.49%), Postives = 79/106 (74.53%), Query Frame = -3 Query: 372 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLA 689 ME+TF+M+KPDGV+RGL+GEII RFE KG++L L+++T AE HY + KPFFG L+E++TSGPVVAM WEGE +V R +IG T P + PGTIRGD A Sbjct: 1 MEKTFLMVKPDGVKRGLIGEIISRFENKGYTLNRLEMVTPSVEVAEAHYAEHKEKPFFGELVEFLTSGPVVAMEWEGEDIVAVSRLMIGKTKPVDAQPGTIRGDFA 106 HSP 2 Score: 38.891 bits (89), Expect = 5.173e-37 Identity = 14/22 (63.64%), Postives = 21/22 (95.45%), Query Frame = -2 Query: 295 NIIHGSDSVESAQKEIALWFPD 360 N+IHGSDSV+SA++E++LWF + Sbjct: 112 NVIHGSDSVDSAERELSLWFAE 133
BLAST of CX296855 vs. ExPASy Swiss-Prot
Match: NDK_PROMS (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain AS9601) GN=ndk PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 6.713e-37 Identity = 66/109 (60.55%), Postives = 82/109 (75.23%), Query Frame = -3 Query: 360 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 686 E+TFI IKPDGVQRG V EI+ RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI G Sbjct: 4 ERTFIAIKPDGVQRGYVSEILGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIG 112 HSP 2 Score: 35.039 bits (79), Expect = 6.713e-37 Identity = 16/35 (45.71%), Postives = 23/35 (65.71%), Query Frame = -2 Query: 259 NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 360 NIIHGSD ++A+ EI LWF + + W++S W Sbjct: 114 NIIHGSDGEDTAKFEINLWFNEEELCEWETSDSKW 148
BLAST of CX296855 vs. ExPASy Swiss-Prot
Match: NDK_PROM9 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ndk PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 8.746e-37 Identity = 67/109 (61.47%), Postives = 82/109 (75.23%), Query Frame = -3 Query: 360 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 686 E+TFI IKPDGVQRG V EII RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI G Sbjct: 4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIG 112 HSP 2 Score: 33.8834 bits (76), Expect = 8.746e-37 Identity = 16/35 (45.71%), Postives = 22/35 (62.86%), Query Frame = -2 Query: 259 NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 360 NIIHGSD ++A+ EI LWF + + W +S W Sbjct: 114 NIIHGSDGEDTAKFEIDLWFNEEELCEWYTSDSKW 148
BLAST of CX296855 vs. ExPASy Swiss-Prot
Match: NDK_PROM0 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ndk PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.484e-36 Identity = 66/109 (60.55%), Postives = 82/109 (75.23%), Query Frame = -3 Query: 360 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTG 686 E+TFI IKPDGVQRG V EII RFEKKGF L GLK + + A+ HY +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IG+T P ++ PGTIRGDLAI G Sbjct: 4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGSTKPLEAEPGTIRGDLAIDIG 112 HSP 2 Score: 34.2686 bits (77), Expect = 1.484e-36 Identity = 16/35 (45.71%), Postives = 23/35 (65.71%), Query Frame = -2 Query: 259 NIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 360 NIIHGSD ++A+ EI LWF + + W++S W Sbjct: 114 NIIHGSDGEDTAKFEIDLWFNEEELCEWETSDLKW 148 The following BLAST results are available for this feature:
BLAST of CX296855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296855 ID=CX296855; Name=CX296855; organism=Citrus clementina; type=EST; length=694bpback to top |