CX296863

Overview
NameCX296863
Unique NameCX296863
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296863 vs. ExPASy Swiss-Prot
Match: PTGR1_PIG (Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.598e-39
Identity = 97/216 (44.91%), Postives = 128/216 (59.26%), Query Frame = 2
Query:   29 GWEEYSLVTAPQL--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYN-LEKPEGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPAIREGKMVYVEDIAE 664
            GW  +S+     L  L+      +PLS   G +GMPG+TAY GL ++C  K GE V V+AA+GAVG +VGQ AKL GC VVG+AGS EKV  LK K+GFD AFNYK    L+  LK+  P+G D YF+NVGG+  +AV   M+  GRIA+CG IS YN    P      E +I   +  +GF+   +   +  K L  ++  + EGK+ Y E I E
Sbjct:   90 GWTTHSISDGKNLERLLAEWPDTLPLSLTLGTVGMPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVACLK-KYGFDVAFNYKTIESLEETLKKASPEGYDCYFDNVGGEFSNAVTSQMKKFGRIAICGAISTYNRTGPPPPGPPPEVVIYNELCFQGFIVTRWQGEVRQKALRDLLKWVSEGKIQYHEHITE 304          
BLAST of CX296863 vs. ExPASy Swiss-Prot
Match: PTGR1_HUMAN (Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.920e-38
Identity = 98/225 (43.56%), Postives = 130/225 (57.78%), Query Frame = 2
Query:    2 KDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP-EGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPAIREGKMVYVEDIAE 664
            K  +V  S GW  +S+     L  L+      +PLS   G +GMPG+TAY GL E+C  K GE V V+AA+GAVG +VGQ AKL GC VVG+ GS EKV  L+ K GFD  FNYK    L+  LK+  P G D YF+NVGG+  + V+  M+  GRIA+CG IS YN   P       E +I + +R+E F+   +      K L+ ++  + EGK+ Y E I E
Sbjct:   81 KGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYIIE 304          
BLAST of CX296863 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.061e-24
Identity = 64/146 (43.84%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   80 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 508
            Q  D  LSY+ G +GMPG+T+  G+ E      G  + + VS A+GA G L GQ  +L GC  VVG  G+ EK   L ++ GFD A NYKE    +   K C P G+D+YF+NVGG + D V+  M     I +CG ISQYN + P
Sbjct:  120 QLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEKCLFLTSELGFDAAINYKEGNVAEQLHKLC-PAGVDVYFDNVGGDISDTVISQMNQNSHIILCGQISQYNKDVP 264          
BLAST of CX296863 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.590e-24
Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   80 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 508
            Q  D  LSY+ G +GMPG+T+  G+ E      G  + + VS A+GA G + GQ   L GC  VVG  G+ EK  LL ++ GFD A NYK++   +   + C P G+D+YF+NVGG + D V+  M     I +CG ISQYN + P
Sbjct:  120 QLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAAINYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVP 264          
BLAST of CX296863 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 72/203 (35.47%), Postives = 106/203 (52.22%), Query Frame = 2
Query:   80 QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLE------KPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIA 661
            Q  D  LSY+ G +GMPG+T+  G+ E    S    + + VS A+GA G L GQ   L GC  VVG  G+ EK   L ++ GFD A NYK   ++   L+   P G+D+YF+NVGG + +AV+  M     I +CG ISQYN +       P  V  +++   + I  E F+  +Y   +   +  +    +EGK+   E +A
Sbjct:  120 QLVDGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEKCLFLTSELGFDAAVNYKTG-NVAEQLREACPDGVDVYFDNVGGDISNAVISQMNQNSHIILCGQISQYNKDVPYPPPLPPAVEAIQK--ERNITRERFMVLNYKDRFEPGILQLSQWFKEGKLKIKETVA 319          
BLAST of CX296863 vs. ExPASy Swiss-Prot
Match: ZADH2_MOUSE (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.336e-23
Identity = 71/213 (33.33%), Postives = 112/213 (52.58%), Query Frame = 2
Query:   38 EYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE------QLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDI 658
            EY++V A    I I    V   Y T ++   G TAY  L E+    +G+ V V+AA+G  GQ   Q +K+A C+V+G+  S EK   LK+  G D   NY+ EP ++  LK+ +P+G+D+ +E+VGG M D  +  +  +GR+ V G IS Y  + P G+  ++      +L+ K   L GF    Y+  Y   +E ++     G +V   D+
Sbjct:  131 EYTVVPAS---IAIPMPSVKPEYLTMLVS--GTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIGTCSSDEKAAFLKS-IGCDRPINYRTEP-VETVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QSPTGLSPIKAGVLPTKLLKKSASLRGFFLNHYFSKYQAAMERLLELYARGDLVCEVDL 334          
BLAST of CX296863 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.336e-23
Identity = 61/146 (41.78%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   80 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 508
            Q  D  LSY+ G +GMPG+T+  G+ E      G  + + VS A+GA G + GQ     GC  VVG  G+ EK  LL ++ GFD A NYK++   +   + C P G+D+YF+NVGG + D V+  M     I +CG ISQYN + P
Sbjct:  120 QLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVP 264          
BLAST of CX296863 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.131e-22
Identity = 61/146 (41.78%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   80 QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 508
            Q  D  LSY+ G +GMPG+T+  G+ E    S    + + VS A+GA G L GQ   L GC  VVG  G++EK   L ++ GFD A NYK   ++   L+   P G+D+YF+NVGG + +AV+  M     I +CG ISQY+ + P
Sbjct:  120 QLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTG-NVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVP 264          
BLAST of CX296863 vs. ExPASy Swiss-Prot
Match: ZADH2_HUMAN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.204e-21
Identity = 67/210 (31.90%), Postives = 107/210 (50.95%), Query Frame = 2
Query:   80 QHTDVPLSYYTGI---------LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE------QLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAE 664
            ++T VP S  T +         L + G TAY  L E+    +G+ V V+AA+G  GQ   Q +K A C+V+G+  S EK   LK+  G D   NYK EP +   LK+ +P+G+D+ +E+VGG M D  +  +  +GR+ V G IS Y  + P G+  ++      +L+ K   ++GF    Y   Y   +  ++     G +V   D+ +
Sbjct:  131 EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGD 336          
BLAST of CX296863 vs. ExPASy Swiss-Prot
Match: QOR_LEIAM (Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.404e-19
Identity = 57/182 (31.32%), Postives = 93/182 (51.10%), Query Frame = 2
Query:  116 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAK-LAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYN------LEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKM 640
            +L +  +TA   L EV   KKG+   V+AA+G  GQ+  Q  K + GC V+G+  S+EK + LK+  G D   NYK E  LD  L    P+G+D+ +E VGG   +  + ++ +  R+ + G IS Y          P G      L+ K   L GF    ++ + PK++  ++  ++ G++
Sbjct:  125 VLPVSALTAAVALGEVGRVKKGDVALVTAAAGGTGQIAVQLLKHVYGCTVIGTCSSEEKAEFLKS-IGCDHVINYKTE-SLDGRLHELCPKGVDVVYECVGGHTFNDAVRHVAVHARVVIIGSISSYKSGEVVPFSDPSGTSVTMLLLVKSASLNGFFLPQFHDVIPKYMANLLQYLKAGQV 304          
The following BLAST results are available for this feature:
BLAST of CX296863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PTGR1_PIG6.598e-3944.91Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 P... [more]
PTGR1_HUMAN1.920e-3843.56Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1... [more]
PTGR2_BOVIN2.061e-2443.84Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 P... [more]
PTGR2_PONAB4.590e-2442.47Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2... [more]
PTGR2_RAT7.830e-2435.47Prostaglandin reductase 2 OS=Rattus norvegicus GN=... [more]
ZADH2_MOUSE1.336e-2333.33Zinc-binding alcohol dehydrogenase domain-containi... [more]
PTGR2_HUMAN1.336e-2341.78Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2... [more]
PTGR2_MOUSE1.131e-2241.78Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2... [more]
ZADH2_HUMAN6.204e-2131.90Zinc-binding alcohol dehydrogenase domain-containi... [more]
QOR_LEIAM3.404e-1931.32Probable quinone oxidoreductase OS=Leishmania amaz... [more]

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Properties
Property NameValue
Genbank descriptionC05803F08SK FerrChloL1 Citrus clementina cDNA clone C05803F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296863 ID=CX296863; Name=CX296863; organism=Citrus clementina; type=EST; length=666bp
AAAAGATGACTTGGTTTGGGGCTCCACCGGGTGGGAGGAGTACAGTCTCG
TTACAGCCCCACAGCTTTTGATTAAAATTCAGCATACAGATGTGCCCCTT
TCATACTATACTGGAATCCTTGGTATGCCTGGTGTGACTGCATACGCTGG
TTTATACGAAGTTTGCTCTCCGAAGAAAGGTGAGTACGTCTATGTATCTG
CAGCATCTGGAGCTGTTGGTCAGCTTGTTGGCCAATTTGCAAAATTGGCT
GGTTGCTATGTTGTTGGAAGTGCTGGAAGCAAAGAAAAGGTCGATTTGTT
GAAGAACAAGTTTGGATTTGATGATGCTTTTAACTACAAGGAAGAGCCAG
ACTTGGATGCAGCACTCAAAAGATGCTTCCCTCAAGGAATCGACATATAT
TTCGAAAACGTTGGGGGAAAGATGCTGGACGCAGTGCTACTCAACATGAG
GCTCCGGGGCCGCATTGCGGTATGCGGTATGATCTCGCAGTACAACCTGG
AAAAACCTGAAGGCGTACACAACTTAGAGCAACTGATTGGGAAACGGATT
CGCCTGGAAGGATTTCTAGCTGGTGATTACTATCACCTCTATCCGAAATT
CTTGGAACTGGTCATTCCTGCAATCAGAGAAGGAAAGATGGTGTATGTGG
AAGACATAGCCGAAGG
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