CX296866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAS_ARTSA (Ras-like protein (Fragment) OS=Artemia salina PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15 Identity = 52/154 (33.77%), Postives = 84/154 (54.55%), Query Frame = 3 Query: 216 GAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNV 671 G VGK+ L I N F +Y PT+ D++ VV++G T L + DTAGQE+Y+ +R R + F+L F++ + S+E++S ++ I +K A VP++LVG K DL + +Q E+ + G P ++E S+KT+ V Sbjct: 1 GGVGKSALTIQLIQNHFVDEYDPTIEDSYRQQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNNAKSFEDISAYREQIKRVKD-AEEVPMVLVGNKCDL-----------PTRAVDMSQAREVARQYGIP-FVETSAKTRMGV 141
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RACJ_DICDI (Rho-related protein racJ OS=Dictyostelium discoideum GN=racJ PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15 Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVP---TVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 +K +GD VGK+C++ SY+S T + +++ +V N + L L Q + R++ + + DVF++ FS+ SKASY+N+ +KW E++ P IILVGTK+DLR + ++ G E K I A Y+ECS+ T + VK VFD Sbjct: 10 VKIFCLGDDGVGKSCVMNSYSSGGPLTSLFQGSELTWTDYTVSVTHNQKPLKLRLV-IGDQNELRRIKQIEFN--DVFLICFSVDSKASYDNI-EKWNTEIRKILPTPNIILVGTKIDLRKEG----GELKKSIVTQEMGIEKAKEINAIKYMECSTATYEGVKEVFD 169
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15 Identity = 47/166 (28.31%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 IK + +GD VGK+CLL+ ++ ++F ++ T+ +F + + G + L +WDTAGQE + + YRGA +L + + + S+ N+ + WI + +H V +L+G K D+ + K + +++G+ L G ++E S+K NV+ F Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNI-RNWIRNIEQHATDSVNKMLIGNKCDMAEKK----------VVDSSRGKSLADEYGI-KFLETSAKNSINVEEAF 169
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB6_DICDI (Ras-related protein Rab-6 OS=Dictyostelium discoideum GN=rab6 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15 Identity = 57/165 (34.55%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKH-YAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 K V +GD +VGKT ++ + +TF Y T+ D S + + TV L LWDTAGQE + L P R + V I+ + + +K S+ N + KWI ++++ V I+LVG K DL D +Q +S +GE K + E S+K N+KA+F Sbjct: 8 KLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDITNKVSFTN-TIKWIEDVRNERGNNVVIMLVGNKTDLADKRQ----------VSIEEGEAKAKEYDI-MFTETSAKAGFNIKALF 160
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB12_MOUSE (Ras-related protein Rab-12 OS=Mus musculus GN=Rab12 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15 Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 ++ + +G VGKT L+ +T +TF TV +F V + G + L +WDTAGQE +N + YR A IL + + K +++++ KW+ + YA ++LVG KLD D++ IS QGE+ + I + E S+K NV +F Sbjct: 42 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNKLDCETDRE----------ISRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 196
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RRAS_MOUSE (Ras-related protein R-Ras OS=Mus musculus GN=Rras PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 51/165 (30.91%), Postives = 79/165 (47.88%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 K V VG G VGK+ L I + + F +DY PT+ D+++ V+G L + DTAGQE++ +R R + F+L F++ + S+ V K + L+ PI+LVG K DL + +Q + S Y E S+K + NV F+ Sbjct: 31 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICTVDGIPARLDILDTAGQEEFGAMREQYMRAGNGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPIVLVGNKADLENQRQVLRSEASSFSASHHM-----------TYFEASAKLRLNVDEAFE 184
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 50/164 (30.49%), Postives = 91/164 (55.49%), Query Frame = 3 Query: 198 CVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHY-APGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 CV +GDG VGKT + I + SN F Y PT+ D + +++ L + DTAGQ++ N +R + + FIL +S+ S++S++ + + ++ ++K + VPII++ K DL D++Q ++ +GE G +++E S+K + N+ VF+ Sbjct: 18 CV-MGDGGVGKTSITIQFISNHFVNCYDPTIEDLYRKQCLIDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQI-QSFLDQIKFLKSEKVPIIMIANKSDLDDERQ----------VTYQEGENFANRFGM-SFMEVSAKYKLNIDEVFN 168
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAP1B_XENTR (Ras-related protein Rap-1b OS=Xenopus tropicalis GN=rap1b PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 50/168 (29.76%), Postives = 86/168 (51.19%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 R K V +G G VGK+ L + + F Y PT+ D++ V V+G L + DTAG E + +R L + F L +S+ +++++ ++ ++ I +K VP+ILVG K DL D++ + QG+ L + A++E S+K++ NV +F Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 158
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAP1B_XENLA (Ras-related protein Rap-1b OS=Xenopus laevis GN=rap1b PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 50/168 (29.76%), Postives = 86/168 (51.19%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 R K V +G G VGK+ L + + F Y PT+ D++ V V+G L + DTAG E + +R L + F L +S+ +++++ ++ ++ I +K VP+ILVG K DL D++ + QG+ L + A++E S+K++ NV +F Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 158
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 44/123 (35.77%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQ 554 +K + +G +VGK+CLL + N F + T+ +FS+ VV + G V L +WDTAGQE + + YRG+ L + + ++ SY +++ W+ ++K A P V IILVG K DL + ++ Sbjct: 8 VKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHIT-NWLSDVKSLASPDVTIILVGNKADLTEQRE 129 The following BLAST results are available for this feature:
BLAST of CX296866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296866 ID=CX296866; Name=CX296866; organism=Citrus clementina; type=EST; length=693bpback to top |