CX296866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RASL_COPCI (24 kDa Ras-like protein OS=Coprinopsis cinerea GN=CC-RAS PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 53/168 (31.55%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 R K V VG G VGK+ L I + + F +Y PT+ D++ +++ L + DTAGQE+Y +R R + F+L +S+ S+ S+E +S + I +K P+I+V K DL ++Q + +G +L K G +IE S+K + NV F Sbjct: 9 REYKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCIIDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISIFHQQILRVKD-QDSFPVIVVANKCDLEYERQ----------VGMNEGRDLAKHFGC-KFIETSAKQRINVDEAF 164
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 52/166 (31.33%), Postives = 85/166 (51.20%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 K + +G+ +VGKT L Y +TF +V TV +F V + V L +WDTAGQE Y + YRGA FIL + + ++ S+ N + W ++K Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFE 177
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 52/166 (31.33%), Postives = 85/166 (51.20%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 K + +G+ +VGKT L Y +TF +V TV +F V + V L +WDTAGQE Y + YRGA FIL + + ++ S+ N + W ++K Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFE 177
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 52/166 (31.33%), Postives = 85/166 (51.20%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 K + +G+ +VGKT L Y +TF +V TV +F V + V L +WDTAGQE Y + YRGA FIL + + ++ S+ N + W ++K Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFE 177
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 51/166 (30.72%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 ++ + +G VGKT L+ +T +TF TV +F V + G + L +WDTAGQE +N + YR A IL + + K +++++ KW+ + YA ++LVG KLD D++ I+ QGE+ + I + E S+K NV +F Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNKLDCETDRE----------ITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 197
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 K V +GD VGK+ LL +T N F + T+ F+ ++ V+G T+ +WDTAGQE Y + YRGA +L + + ++ENV ++W+ EL+ +A + I+LVG K DL+ H V AQ R+ + ++IE S+ NV+ F Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENV-ERWLKELRDHADSNIVIMLVGNKSDLK--------HLRDVQTEVAQAFCEREGL---SFIETSALESTNVEKAF 166
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: YPT7_YEAST (GTP-binding protein YPT7 OS=Saccharomyces cerevisiae GN=YPT7 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTV-NLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-----PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 +K + +GD VGKT L+ Y ++ + Y T+ +F + V V+G V + +WDTAGQE + L YRGAD +L + + + +S+EN+ K W E +A P +++G K+D + K+ +S +EL K +G S+K NV F+ Sbjct: 9 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENI-KSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKI---------VSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFE 170
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RABM_DICDI (Ras-related protein RabM OS=Dictyostelium discoideum GN=rabM PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 49/173 (28.32%), Postives = 89/173 (51.45%), Query Frame = 3 Query: 180 ASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIILVGTKLDL-RDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 + + +K +T+GD VGKT + ++ + + + +S + + V L +WDT QE +N L P+ YR ++ + L F + ++ S++N+ K W+ E + + G VP +L+GTK D+ R DK + + E + +I Y E S+K QN+ ++AA Sbjct: 2 SKKSLKIITLGDSYVGKTSVFNNFVTGKYEINECTVSPSFYSKTLTIENEPVILNVWDTCSQERFNGLSPIYYRWSNCYTLCFDIHNEKSFKNLDK-WMDEARKFCIGKVPFVLIGTKKDIPRTDKSISKERIE----QWCKNIEDQGIIDRVHYFETSAKFSQNITESYNAA 169
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB6B_CAEEL (Ras-related protein Rab-6.2 OS=Caenorhabditis elegans GN=rab-6.2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 55/165 (33.33%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 K V +G+ +VGKT L+ + ++F Y T+ D S + + TV L LWDTAGQE + L P R + V ++ + + + S+ S KWI +++ V I+LVG K DL D +Q ++T +GE K + +IE S+K NVK +F Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTS-KWIDDVRTERGSDVIIMLVGNKTDLSDKRQ----------VTTDEGERKAKELNV-MFIETSAKAGYNVKQLF 164
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB34_PIG (Ras-related protein Rab-34 OS=Sus scrofa GN=RAB34 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 58/166 (34.94%), Postives = 85/166 (51.20%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSAN-VVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 K + VGD +VGKTCL+ + +TF +Y T+ +F V G +L LWDTAGQE + + YRGA I+ F+L AS E+ +K+W+ + LK P V + LVG+K DL Q+ + A+ ++ E Y SS T +NV+ F Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGVPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEH-TKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYVLMEKDALKVAHEMKAE---------YWAVSSLTGENVREFF 209 The following BLAST results are available for this feature:
BLAST of CX296866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296866 ID=CX296866; Name=CX296866; organism=Citrus clementina; type=EST; length=693bpback to top |