CX296866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 48/169 (28.40%), Postives = 86/169 (50.89%), Query Frame = 3 Query: 183 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL + ++ + ++ + G ++E S+KT +NV+ F Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRD----------VTYEEAKQFAEENGL-LFLEASAKTGENVEDAF 165
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 48/169 (28.40%), Postives = 86/169 (50.89%), Query Frame = 3 Query: 183 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL + ++ + ++ + G ++E S+KT +NV+ F Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRD----------VTYEEAKQFAEENGL-LFLEASAKTGENVEDAF 165
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 48/169 (28.40%), Postives = 86/169 (50.89%), Query Frame = 3 Query: 183 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL + ++ + ++ + G ++E S+KT +NV+ F Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRD----------VTYEEAKQFAEENGL-LFLEASAKTGENVEDAF 165
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RYH1_SCHPO (GTP-binding protein ryh1 OS=Schizosaccharomyces pombe GN=ryh1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 55/168 (32.74%), Postives = 87/168 (51.79%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 R K V +G+ +VGKT L+ + + F Y T+ D S + + TV L LWDTAGQE + L P R + V I+ + + + S+ N ++KWI +++ V I+LVG K DL D +Q ++ +GE+ K + ++E S+K NVK +F Sbjct: 10 RKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKTDLADKRQ----------VTQEEGEKKAKELKI-MHMETSAKAGHNVKLLF 165
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RB27A_MOUSE (Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/173 (32.37%), Postives = 81/173 (46.82%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-----------NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK--HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNV 671 IK + +GD VGKT +L YT F + ++ TV +F VV G ++L LWDTAGQE + L +R A F+L F L ++ S+ NV + WI +L+ Y I+L G K DL D + + + EL + G P Y E S+ N+ Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYCENPDIVLCGNKSDLEDQR----------AVKEEEARELAEKYGIP-YFETSAANGTNI 170
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 51/168 (30.36%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 R K V VG G VGK+ L I + + F +Y PT+ D++ V++ L + DTAGQE+Y +R R + F+L +S+ S+ S+E +S + I +K P+++V K DL ++Q + +G +L + G ++E S+K + NV F Sbjct: 9 REYKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKD-QDTFPVVVVANKCDLEYERQ----------VGMNEGRDLARHFGC-KFVETSAKVRINVDQAF 164
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQF-FIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 K + +G GK+CLL + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA +L + + S+ +Y N W+ + + A P + IIL G K DL D++ F++ AQ EL ++E S+ T +NV+ F Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLE-----ASRFAQENEL-------MFLETSALTGENVEEAF 162
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 47/168 (27.98%), Postives = 89/168 (52.98%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 +K + +G+ VGK+ LL+ +T +TF + T+ +F + ++G+ L +WDTAGQE + L P YRGA IL + + + ++ + + W+ EL+ Y ++ LVG K+D +D+++ +D + + + +IE S+KT+ V+ F+ Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKL-ENWLNELETYCTRNDLVKMLVGNKID-KDNRE--VDRNEGLKFARKH---------SMLFIEASAKTRDGVQCAFE 163
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 47/167 (28.14%), Postives = 88/167 (52.69%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHY-APGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 +KC+ G VGK+ LL+ + F + T+ F +++++ S + L +WDTAGQE + + YRGA + +L + + + S++ +S W+ E++ +P + I L+G K D +D + I+T +G + K + E S+K ++V++VFD Sbjct: 6 LKCIVTGPPFVGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTAGQESFRSITTNYYRGAHIALLCYDITKRQSFQYLS-GWMDEVRQMSSPNIVIALIGNKCDCKDKR----------VITTEEGAKNAK-ENDILFFETSAKDYESVESVFD 160
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB6A_CAEEL (Ras-related protein Rab-6.1 OS=Caenorhabditis elegans GN=rab-6.1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 52/171 (30.41%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 177 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKH-YAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 +A + K V +G+ +VGKT ++ + ++F Y T+ D S + + T+ L LWDTAGQE + L P R + V ++ + + + S+ + KW+ ++++ V I+LVG K DL D +Q +ST GE+ + + +IE S+K NVK +F Sbjct: 7 NALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTT-KWVDDVRNERGCDVIIVLVGNKTDLADKRQ----------VSTEDGEKKARDLNV-MFIETSAKAGYNVKQLF 165 The following BLAST results are available for this feature:
BLAST of CX296866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296866 ID=CX296866; Name=CX296866; organism=Citrus clementina; type=EST; length=693bpback to top |