CX296871

Overview
NameCX296871
Unique NameCX296871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3029 contig Ccv1_Contig3029:823..1568. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.221e-19
Identity = 65/231 (28.14%), Postives = 120/231 (51.95%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAV-QGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESK-DFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RKVC  ++ +   ++S   +R ++  E V Y+  + G  V + E +F T++N+  N+++   + +  D  S  +EF++ +  M EL  + N +D+FP L +FDL G  K+          ++  M+ +R    +  G +SK DF+   L         + L    + ALLM++   G++T++++ E+AM E+   P+   + + E+  VVG +  V+ES    LPYL A +
Sbjct:  124 RKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGDPNSGSSEFKEYLWRMLELGNSTNPADYFPMLGKFDLFGQRKEVAECLKGIYAIWGAMLQERKLAKKVDGYKSKNDFVDVCLD--------SGLNDYQINALLMELFGAGTETSASTIEWAMTELTKNPKITAKIRSEIQTVVG-ERSVKESDFPNLPYLEATV 345          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.494e-19
Identity = 65/233 (27.90%), Postives = 121/233 (51.93%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVG---VGEQLFLTILNVITNMLWGGAVQGDDRASI----GAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQ-RLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYL 734
            R++  L +LSN  ++S   +RR + +  +  +   + +      +  +L+    N I  M+ G    G+D  +      ++FR +VSE+ +L G  N +DF P L   D + L K+ + +  K D     +I++ R K +R     +   +  LL L+D        T   +K L + M++ G+D+++ + E++M+ ++N PE +K+ + ELD  VG+D +V+ES + KL YL
Sbjct:  128 RRITALDVLSNHRINSFSGIRRDETQRLITRLADDSSTNFAEMELSSRLYDMTFNNIMRMISGKRYYGEDCDTSDLQEASQFRDMVSELLQLSGANNKTDFMPLLRFLDFENLEKRLKDISGKTDAFLRGLIEEHRTKKER-----ANTMIDHLLNLQDSQPEY--YTDQIIKGLALAMLLAGTDSSAVTLEWSMSNLLNHPEVLKKVKDELDTHVGQDRLVDESDLPKLTYL 353          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.175e-19
Identity = 65/231 (28.14%), Postives = 119/231 (51.52%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGA-EFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESK-DFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RKVC  ++ +   ++S   +R ++  E V Y+  + G  V + E +F T++N+  N+++   +      + G+ EF++ +  M EL  + N +D+FP L +FDL G  K+          ++  M+ +R    +  G +SK DF+   L         + L    + ALLM++   G++T++++ E+AM E+   P+   + + EL  VVG +  V+ES    LPYL A +
Sbjct:  125 RKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGXPNSGSSEFKEYLWRMLELGNSTNPADYFPMLGKFDLFGQRKEVAECLKGIYAIWGAMLQERKLAKKVDGYQSKNDFVDVCLD--------SGLNDYQINALLMELFGAGTETSASTIEWAMTELTKNPKITAKLRSELQTVVG-ERSVKESDFPNLPYLEATV 346          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.088e-18
Identity = 70/238 (29.41%), Postives = 123/238 (51.68%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVG-EQLFLTI-LNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFP--GLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEAD--SKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDN---IVEESHIYKLPYLFAVM 746
            RK+CV ++  N  ++S+  ++  ++ + +  I   A     V     FL++ +NVI   ++G   QG        +F+ +V E  E+LG+ + SDFFP  G       GL  +        D  ++ MID  L+ +RE  +   DF+  LL+L+ E        LT  H+KA+LM++++GG +T++ +  +AMAE++  P  +K+ Q E+   +G++N   I+    I  L YL  V+
Sbjct:  126 RKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNVICKAVFGVNFQGT--VLNNDKFQDLVHEALEMLGSFSASDFFPYVGWIVDWFTGLHARRERSVRDLDAFYEQMIDLHLQKNRE--ESEDDFVDLLLRLEKEEAVLGYGKLTRNHIKAILMNILLGGINTSAITMTWAMAELIRNPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVI 359          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.088e-18
Identity = 64/235 (27.23%), Postives = 117/235 (49.79%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTV-GVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFD-LQGLVKKSRALKNKFDKMFDLMIDQRL----KMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            + + VL +LSNT + S   +R  +    +G I     S+V  +GE L     N+I+ +  G      D    G E   ++ +  ELLG  NV D+ P L   +   GL  K + +  + D   +++I++ +    K +     E+KDF+  LL++++  ++  PL    +KA+L+D    G+DTT  + ++ MAE++ +P  +K  Q E+  +    + + E  +  + YL AV+
Sbjct:  133 KSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSVINLGEHLCSLTNNIISRVALGRTY---DEKESGIE--HIIEQFVELLGIFNVGDYIPRLEWVNKFTGLDAKVKKVAKELDMFLEIVIEEHIIRKKKEEYTSTGEAKDFVDVLLEIQNGNETDFPLQRDSLKAILLDSFAAGTDTTFATLDWTMAELLRQPRALKTLQDEVRGLAQGKSEITEDDLKNMQYLRAVI 362          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.561e-18
Identity = 65/241 (26.97%), Postives = 119/241 (49.38%), Query Frame = 3
Query:   42 SAPGGT-----RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFD-LQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            SAP G      + VCVL + SN  + S   +R  ++   +  I       V + + L     +VI  +  G    G+       +F++++  + +LLGT +V  + P LA  D ++GL  +     N  DK F+ ++   +  +R+      DF+  LL ++ +      +  + +KA++M++ VGG+DT+S   E+AM E++  P+ +KR Q+E+  +    + V E  I  + YL AV+
Sbjct:  116 SAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVNLSKILVSLTNDVICKVALGRKYGGE------TDFKELMERLNKLLGTFSVGSYVPWLAWIDWIRGLDCQLEKTANDVDKFFERVVQDHVDGNRDM----TDFVDVLLAIQRDKTVGFEINRVSIKAIVMNVFVGGTDTSSTLMEWAMTELLRHPKCLKRLQEEVRTICKDKSSVSEEEIQNMSYLKAVI 346          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.036e-17
Identity = 56/232 (24.14%), Postives = 115/232 (49.57%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVG-EQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFD-LQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVV-GRDNIVEESHIYKLPYLFAVM 746
            + VC+L +L+N  + S   +R  +L E +  +   + S+      +LF+T+ + +T+ +  G    +D  +   + ++ V ++ ELLG   + D+ P LA  D + G   + + +   F  + D ++ + L    E G   +DF+  LL ++ E           +K +++DM +GG+ T+S   E+ M E++  P  +K+ Q E+   +    + ++E  +  + YL AV+
Sbjct:  129 KSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLSELFVTLPSDVTSRIALGRKHSEDETA--RDLKKRVRQIMELLGEFPIGDYVPALAWIDRINGFNARIKEVSQGFSDLMDKVVQEHL----EAGNHKEDFVDILLSIESEKSIGFQAQRDDIKFMILDMFIGGTSTSSTLLEWIMTELIRNPNVMKKLQDEIRSTIRPHGSYIKEKDVENMKYLKAVI 354          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.353e-17
Identity = 66/232 (28.45%), Postives = 112/232 (48.28%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRA--GSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFD-LQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+C++ + S   + S   +R  + +  +  IY  A    TV + E L      V+    +G     ++  +    F  ++ E   LLGT   SD FP     D L GL  + +    + D     ++D+ L  +R   +E++ F+  L+Q+  +       T  +VKA+++D+VV G+DT +    +AM  ++  PE +K+AQ E+  V+G    V E  I  LPYL AV+
Sbjct:  126 RKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKRY--NEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP-KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRSVIGDKGYVSEEDIPNLPYLKAVI 354          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.353e-17
Identity = 65/182 (35.71%), Postives = 95/182 (52.20%), Query Frame = 3
Query:  213 NVITNMLWGGAVQGDDRASIGAEFRQV-----VSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGK-ESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFA 740
            NVI  +++     G+ +A  G    +V     V     LL    VSD+ P L   DL G  K  +      +++ D +ID R +  +   + E +DFL  L+ LKD A     LT+  VKA   D+     D  SN+ E+A+AEM+N PE + +A +ELD VVGR+ +V+ES I KL Y+ A
Sbjct:  224 NVIRRLMFNRRYFGEPQADGGPGPMEVLHMDAVFTSLGLLYAFCVSDYLPWLRGLDLDGHEKIVKEANVAVNRLHDTVIDDRWRQWKSGERQEMEDFLDVLITLKD-AQGNPLLTIEEVKAQSQDITFAAVDNPSNAVEWALAEMVNNPEVMAKAMEELDRVVGRERLVQESDIPKLNYVKA 404          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.767e-17
Identity = 54/232 (23.28%), Postives = 119/232 (51.29%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVG-EQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFD-LQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVV-GRDNIVEESHIYKLPYLFAVM 746
            + VC+L +L+N  ++S   +R  ++   +  +   + S+      +LF+T+ + +T+ +  G    +D  +   + ++ V ++ ELLG   + ++ P LA  D ++G   K + +   F  + D ++ + L    E   +  DF+  LL ++ + +S   +    +K +++DM +GG+ TTS   E+ M E++  P+ +K+ Q E+   +    + ++E  +  + YL AV+
Sbjct:  129 KSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRVALGRKHSEDETA--RDLKKRVRQIMELLGEFPIGEYVPILAWIDGIRGFNNKIKEVSRGFSDLMDKVVQEHL----EASNDKADFVDILLSIEKDKNSGFQVQRNDIKFMILDMFIGGTSTTSTLLEWTMTELIRSPKSMKKLQDEIRSTIRPHGSYIKEKEVENMKYLKAVI 354          
The following BLAST results are available for this feature:
BLAST of CX296871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
C80B1_ESCCA3.221e-1928.14(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C81E1_GLYEC5.494e-1927.90Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C80B2_ESCCA7.175e-1928.14(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71BA_ARATH2.088e-1829.41Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME2.088e-1827.23Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71AQ_ARATH3.561e-1826.97Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.036e-1724.14Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH1.353e-1728.45Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C79A1_SORBI1.353e-1735.71Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C71AD_ARATH1.767e-1723.28Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05803G04SK FerrChloL1 Citrus clementina cDNA clone C05803G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296871 ID=CX296871; Name=CX296871; organism=Citrus clementina; type=EST; length=746bp
GAAGCCTCGTGCCGAATTCGGCACGAGGCCTCGTGCCGAATTCGGCACCA
GGCGGCACGAGGAAAGTCTGTGTGCTCAAGATGCTCAGTAATACCACGTT
AGACTCCGTCTACGCGCTCCGTCGCCGTCAGCTCCGTGAGACTGTAGGTT
ATATTTACACTCGGGCCGGGTCAACCGTTGGCGTCGGTGAGCAACTGTTT
TTAACGATATTGAATGTGATAACGAACATGTTGTGGGGAGGCGCAGTGCA
AGGCGATGACAGGGCCAGCATTGGTGCGGAGTTTAGGCAAGTGGTGTCGG
AAATGACGGAGCTGTTGGGTACGCCCAATGTATCGGATTTCTTTCCCGGG
TTGGCCCGGTTCGACTTGCAAGGTTTGGTGAAGAAGTCGCGTGCGTTGAA
AAACAAGTTTGATAAGATGTTTGACCTGATGATTGATCAACGTCTGAAGA
TGGATAGAGAATGTGGGAAAGAGAGTAAAGATTTTCTGCAATTTCTGTTA
CAATTGAAGGATGAAGCTGATTCCAAGACACCTTTGACCATGATTCATGT
CAAAGCTCTGCTTATGGATATGGTGGTTGGTGGGTCAGATACAACCTCCA
ACTCAACTGAATTCGCCATGGCTGAAATGATGAACAAACCAGAAGGTATC
AAAAGAGCCCAGCAAGAATTGGACGAAGTTGTTGGCAGAGACAACATAGT
AGAAGAGTCCCACATTTACAAACTGCCATATCTATTTGCTGTAATG
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