CX296871

Overview
NameCX296871
Unique NameCX296871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.654e-15
Identity = 66/237 (27.85%), Postives = 112/237 (47.26%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARF-----DLQGLVKKS-RALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEAD--SKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+ V ++ S+  + S+  ++  ++++ +  I   A     +     L  L V        +V  +        F  +V E  E+LG+ + SDF P + R       LQG  ++S R L   +++MFDL      K  +E G E  DF+  LL+L+ E        LT  H+KA+LMD+++ G DT++ +  +AMAE+   P  +K+ Q E+   +     +      KL YL  V+
Sbjct:  127 RKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCRTAFSVNFEGTVLNSERFNNIVREALEMLGSFSASDFIPYVGRIIDLLTGLQGRRERSMRDLDAFYEQMFDLH-----KQKKEEGSE--DFVDLLLRLEKEEAVLGNDKLTRNHIKAILMDVLLAGMDTSAITMTWAMAELAKNPRVMKKVQSEIRSQIKNKERISFDDTDKLEYLKMVI 356          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.160e-15
Identity = 68/242 (28.10%), Postives = 120/242 (49.59%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTE----LLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMF---DLMIDQRLK------MDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+ +L++LS   + S  A+R  +++  +  I    G  V + E       N++  +  G       R   GA+    VSEM +    +LG     DFFP L      G + K   L+N+ +K+F   D   DQ +K           G E +D +  LL+++ + +    +T   +K +L+D+ V G+DT S +  + M+E++  P+ +KRAQ+E+ ++V    +VEE  + KL Y+ +V+
Sbjct:  128 RKIMILELLSPKRVQSFEAVRFEEVKLLLQTIALSHGP-VNLSELTLSLTNNIVCRIALG------KRNRSGADDANKVSEMLKETQAMLGGFFPVDFFPRL------GWLNKFSGLENRLEKIFREMDNFYDQVIKEHIADNSSERSGAEHEDVVDVLLRVQKDPNQAIAITDDQIKGVLVDIFVAGTDTASATIIWIMSELIRNPKAMKRAQEEVRDLVTGKEMVEEIDLSKLLYIKSVV 356          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.821e-15
Identity = 61/237 (25.74%), Postives = 122/237 (51.48%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIG--AEFRQV-VSEMTE---LLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKES--KDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+C +++L+   + S  ++R  ++ E V  I   A    G        +   I +M +G A     RA+ G  + ++QV +S M +   LLG  +V+D +P    F + G   K   +    D++   +ID+    +R   +    +D +  LL+ + E++ +  LT  ++KA++ D+ +GG +T+S+  E+ M+E++  P  ++ AQ E+  V      V+E+ +++L YL +++
Sbjct:  141 RKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGS----IFNLTQSIYSMTFGIAA----RAAFGKKSRYQQVFISNMHKQLMLLGGFSVADLYPSSRVFQMMGATGKLEKVHRVTDRVLQDIIDEHKNRNRSSEEREAVEDLVDVLLKFQKESEFR--LTDDNIKAVIQDIFIGGGETSSSVVEWGMSELIRNPRVMEEAQAEVRRVYDSKGYVDETELHQLIYLKSII 367          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.685e-15
Identity = 63/226 (27.88%), Postives = 112/226 (49.56%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGST--VGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVK--KSRALKNKFDKMFDLMIDQRLKM--DRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQEL-------DEVVGRDNI 698
            RK+  + +L+ + + S    R  ++R  +  +   A +   V + E L   + N++   + G     + R  +   FR++      LLG  ++ D+FP L R +L   V   K+R ++ ++D + D +ID         +   + KDF+  LL L+ E      LT  H+KA+L+DM   G+DT+  + EFAM E++ KP  +K+ Q+E+        E+V  DN+
Sbjct:  165 RKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRL---FRELTDINAGLLGGFHIQDYFPRLGRIELVRKVACAKTRRVRKRWDDLLDKLIDDHAARMATHQDEDDDKDFIYVLLSLQKEYG----LTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNL 383          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.685e-15
Identity = 66/244 (27.05%), Postives = 123/244 (50.41%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAG--STVGVGEQLFLTILNVITNMLWG----GAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARF-----DLQGLVKKS-RALKNKFDKMFDLMIDQRLKMDRECGKE-SKDFLQFLLQLKDEAD--SKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+CV ++ S   + S+  ++  ++++ +  I   A   + V +  +     ++V+    +G    G V   DR      F ++V E  E+LG+ + +DF P +         LQG  ++S R L   F++MFDL         +E  KE ++DF+  LL+L+ E        LT  H+KA+L+D+++ G DT++ +  +AM E+   P  +K+ Q E+   +G  +++    + +L YL  V+
Sbjct:  126 RKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNLNNKCLELTVSVVCRTAFGVSFEGTVLNSDR------FNKIVREALEMLGSFSAADFIPYVGWIIDVLTGLQGRRERSKRDLNAFFEQMFDL--------HKEGKKEGNEDFVDLLLRLEKEEAVLGNDKLTRNHIKAILLDVLLAGIDTSAITMTWAMTELARNPRVMKKVQSEIRTQMGNRSMISFEDMDQLEYLKMVI 355          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.813e-15
Identity = 60/191 (31.41%), Postives = 100/191 (52.36%), Query Frame = 3
Query:  210 LNVITNMLWGGAVQGD---DRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRE---CGKESK-----DFLQ-FLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            LN++  M+ G    GD   +       F + + +   L+GT  V D  P L   DL G  K+ +    K  K FD+M+++ L+  RE    G E K     DF+   LL LKD+      +  I +KA  +++++GGSDTT+ +  +AM  ++  P  +++ ++EL+  +G++  V ES I KL YL A++
Sbjct:  210 LNMVLRMVVGKRCFGDVDVENKEEAKRFLENIRDFMRLIGTFTVGDGVPFLKWLDLGGHEKEMK----KCAKKFDVMLNEWLEEHREKKGLGSEDKVVGERDFMDAMLLVLKDKPIEGFDVDTI-IKATTLELILGGSDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAII 395          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.813e-15
Identity = 54/231 (23.38%), Postives = 115/231 (49.78%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVK-KSRALKNKFDKMFDLMIDQ-RLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+CV ++LS   + S   +R+ ++   + ++ + AG TV + E++     ++I    +G  +   +      E  ++V +   +     ++D FP     +L    K K   ++ + D + + ++D+ +LK   E G E  D +  L +++ ++  K P+T   +KA + D    G++T+S +T + MAE+M  P  + +AQ E+   +     V+   + +L Y+ +V+
Sbjct:  131 RKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERIATLTCSIICRAAFGAIINDHE------ELVELVKDSLSMASGFELADLFPSSKLLNLLCWNKSKLWRMRRRVDTILEAIVDEHKLKKSGEFGGE--DIIDVLFRMQKDSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVV 353          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.813e-15
Identity = 60/158 (37.97%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  279 EFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQ--RLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            + R++V E  +LLG  N +D  P L   D   +  +   L  +       +I+Q  R +  RE G +  DF+  LL L+ E D      MI   A+L +M+  G+DTT+  TE+ MAE++  PE  K+AQ ELD VVG D  V++S I KLPY+ AV+
Sbjct:  249 KLREMVDEGFQLLGAFNWADHLPWLRPLDPLRIHARCARLVPRVTTFVSNIIEQHRREEQRRESGDQC-DFVDVLLSLQGE-DKLDEEDMI---AVLWEMIFRGTDTTALLTEWTMAELVLHPEAQKKAQAELDAVVGHDRSVKDSDIPKLPYIQAVV 401          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.813e-15
Identity = 55/232 (23.71%), Postives = 115/232 (49.57%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVG-EQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFD-LQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVV-GRDNIVEESHIYKLPYLFAVM 746
            + VC+L +L+N  + S   +R  ++   +  +   + S+      +LF+T+ + +T+ +  G    +D  + G + R  V ++ ELL    + D+ P LA  D + G   K   +   +  + + ++ + L    E G+   DF+  LL ++ E ++   +    +K +++DM +GG  T+S   E+ M E++  PE +K+ Q E+   +    + ++E  +  + YL AV+
Sbjct:  129 KSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSDVTSRVSLGKKYWEDETAGGLKKR--VRQIMELLREFPIGDYVPALAWIDRINGFNSKIVEVSRAYSDLMEKVVQEHL----EAGEHKADFVNILLSIEKEKNNGFKVQRNDIKFMILDMFIGGISTSSTLLEWIMTELIRNPECMKKLQNEIRSTIRPHGSYIKEKEVENMRYLKAVI 354          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.209e-15
Identity = 67/224 (29.91%), Postives = 107/224 (47.77%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFR-QVVSEMTELLGTPN---VSDFFPGLARFD-LQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFL-QFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESH 713
            RK+C +++LS   +  +  +R  +    V  I   AG   G       T+L   TN     A  G    + G E + Q ++ + E L   N     D FP L   D + GL  +   L+ + D +FD ++ Q       C     D L   LL++KD+ +   P +  HVKA+++DM  GG++TTS++TE+ M+E+M  PE + + Q E+  V   DN   + H
Sbjct:  132 RKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAG---GKKPFTLATLLISCTNTFTAKAAFGQ---ACGGELQEQFLTALDEALKFSNGFCFGDLFPSLRFIDAMTGLRSRLERLRLQLDTVFDKIVAQ-------CESNPGDSLVNVLLRIKDQGELDFPFSSTHVKAIILDMFTGGTETTSSTTEWLMSELMRNPEVMAKVQAEVRGVF--DNKSPQDH 340          
The following BLAST results are available for this feature:
BLAST of CX296871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
C71BV_ARATH1.654e-1527.85Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71A9_SOYBN2.160e-1528.10Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71DA_SOYBN2.821e-1525.74Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71C4_MAIZE3.685e-1527.88Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71BW_ARATH3.685e-1527.05Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C82A1_PEA4.813e-1531.41Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C7D95_MENSP4.813e-1523.38Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C78A4_PINRA4.813e-1537.97Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71AI_ARATH4.813e-1523.71Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ8.209e-1529.91Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionC05803G04SK FerrChloL1 Citrus clementina cDNA clone C05803G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296871 ID=CX296871; Name=CX296871; organism=Citrus clementina; type=EST; length=746bp
GAAGCCTCGTGCCGAATTCGGCACGAGGCCTCGTGCCGAATTCGGCACCA
GGCGGCACGAGGAAAGTCTGTGTGCTCAAGATGCTCAGTAATACCACGTT
AGACTCCGTCTACGCGCTCCGTCGCCGTCAGCTCCGTGAGACTGTAGGTT
ATATTTACACTCGGGCCGGGTCAACCGTTGGCGTCGGTGAGCAACTGTTT
TTAACGATATTGAATGTGATAACGAACATGTTGTGGGGAGGCGCAGTGCA
AGGCGATGACAGGGCCAGCATTGGTGCGGAGTTTAGGCAAGTGGTGTCGG
AAATGACGGAGCTGTTGGGTACGCCCAATGTATCGGATTTCTTTCCCGGG
TTGGCCCGGTTCGACTTGCAAGGTTTGGTGAAGAAGTCGCGTGCGTTGAA
AAACAAGTTTGATAAGATGTTTGACCTGATGATTGATCAACGTCTGAAGA
TGGATAGAGAATGTGGGAAAGAGAGTAAAGATTTTCTGCAATTTCTGTTA
CAATTGAAGGATGAAGCTGATTCCAAGACACCTTTGACCATGATTCATGT
CAAAGCTCTGCTTATGGATATGGTGGTTGGTGGGTCAGATACAACCTCCA
ACTCAACTGAATTCGCCATGGCTGAAATGATGAACAAACCAGAAGGTATC
AAAAGAGCCCAGCAAGAATTGGACGAAGTTGTTGGCAGAGACAACATAGT
AGAAGAGTCCCACATTTACAAACTGCCATATCTATTTGCTGTAATG
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