CX296871

Overview
NameCX296871
Unique NameCX296871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3029 contig Ccv1_Contig3029:823..1568. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.813e-12
Identity = 52/232 (22.41%), Postives = 116/232 (50.00%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVG-EQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFD-LQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNI-VEESHIYKLPYLFAVM 746
            + VC++ +L+   + S   +R  ++ E +  +   +  +  +   +L LT+ + +T+ +  G     + +   ++F+  + ++TEL+G   V ++ P LA  D L+G+ +K+  +   F  + + ++ + L       K + DF+  LL L+    +   +    +K L++DM + G++TT    E+ M E++  PE +K+ Q E+     +  + + E  +  + YL AV+
Sbjct:  129 KSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELLLTLTSDVTSRVSLGRKYSKEESM--SDFKIQMRKITELVGGFPVGEYIPCLAWIDKLRGVDEKAEEVSKAFGDLMEKVLQEHLDAT---DKPTLDFVDVLLSLERHERNGVQIRRSDIKFLILDMFLAGTETTYALLEWIMTELIRHPECMKKLQDEIRAKATKLILYISEEDVEDMKYLKAVV 355          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 8.495e-12
Identity = 61/237 (25.74%), Postives = 116/237 (48.95%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAG--STVGVGEQLFLTILNVITNMLWGGAVQGDDRASI--GAEFRQVVSEMTELLGTPNVSDFFP--GLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEAD--SKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            R++CV ++ S   + S+  ++  ++R+ +      A   S V + E+     L++  +++   A   D   S+     F +++ +    LG+ + S+FFP  G     L GL ++        D  +  M D   K + + G E  DF+  LL+L+ E        LT  HVKA+LM++++G  +T++ +  +AMAE++  P  +K+ Q E+   +   +++    I  LPYL  V+
Sbjct:  127 RRICVQELFSAKRVHSIQPIKEEEVRKLIVSATESASQKSPVNLSEKF----LDLTVSVICKAAFSLDFHTSVLNNDGFDKLIHDAFLFLGSFSASNFFPNGGWIIDWLTGLQRRREKSVKDLDVFYQQMFDLH-KQENKQGVE--DFVDLLLKLEKEETVLGYGKLTRNHVKAILMNVLLGAINTSAMTMTWAMAELIRNPRVMKKVQSEIRNQMINKSVITLDDIDHLPYLKMVI 356          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 65/242 (26.86%), Postives = 116/242 (47.93%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQ-----------LFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVS-DFFPGLARFDL-QGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKD--FLQFLLQLKDEADSKTP--LTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVV-GRDNIVEESHIYKLPY 731
            RK+C+ ++L+   +  + A+R  +    V  +   AG+  G   Q           L L+    IT     G + GD+  S        V ++  L G+   + D FP L   D+  GL ++    + + D +FD ++ +     R+  K + D  FL  LL+++D+        ++   +KA+L DM+ GG++TTS++ E+ M+E+M KPE + +AQ E+   + G+     E  + KL Y
Sbjct:  124 RKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVYAAGAGGGGRGQRGEAPVVNLGRLVLSCSMAITGRATLGKLCGDEIMS--------VVDVAVLYGSGFCAGDLFPSLWFVDVVTGLTRRLWTARRRLDAIFDRILAECEARQRQEEKMTGDDGFLGVLLRIRDDDGEPETGGISTTSIKAILFDMLAGGTETTSSAAEWIMSELMRKPEAMAKAQAEVRGALDGKSPEDHEGQMDKLSY 357          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 54/243 (22.22%), Postives = 118/243 (48.56%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIY--------TRAG-STVGVGEQLFLTILNVITNMLWG-----GAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+ + + LS + ++ ++ +R  +++ ++  ++         ++G +TV + +   L + N+I  M+ G      +   D++A+      + V E   L  T  V D  P L  FD  G     R    + D++    +D+  +  R+ G+  +D +  LL L +    +     I +K+ ++ ++  G++ +  +  +A + ++N P  +++ + ELD  VG++  + ES + KL YL AV+
Sbjct:  135 RKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVELKQWFSLLVFNMILRMVCGKRYFSASTSDDEKAN---RCVKAVDEFVRLAATFTVGDAIPYLRWFDFGGYENDMRETGKELDEIIGEWLDEH-RQKRKMGENVQDLMSVLLSLLEGKTIEGMNVDIVIKSFVLTVIQAGTEASITTLIWATSLILNNPSVLEKLKAELDIQVGKERYICESDLSKLTYLQAVV 373          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 60/199 (30.15%), Postives = 94/199 (47.24%), Query Frame = 3
Query:  165 AGSTVGVGEQLFLTILNVITNMLWGGA--VQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLAR-FDLQGLVKKSRALKNKFDKMFDLMIDQ--RLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            A   V +   L    LN I   ++G    V     A+     + +V E  ELLG  N SD  P LA  +D   + ++  AL  +       +ID+  R + +     ++ DF+  LL L  E D K  L    + A+L +MV  G+DTT+  TE+ MAE++  P    R + E+D  VG      ++ + ++PYL AV+
Sbjct:  206 ASGAVALRPHLQAAALNNIMGSVFGTRYDVTSGAGAAEAEHLKSMVREGFELLGAFNWSDHLPWLAHLYDPSNVTRRCAALVPRVQTFVRGVIDEHRRRRQNSAALNDNADFVDVLLSL--EGDEK--LGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVV 400          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.228e-11
Identity = 60/238 (25.21%), Postives = 123/238 (51.68%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGST---VGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMF---DLMIDQRLKMDRECGKESKDFLQFLLQL-KDEAD-SKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVV-GRDNIVEESHIYKLPYLFAVM 746
            RK+ V+++ +   + S    R+ ++   V +I T+A S    V +  +L     +VI  +++G  ++G    ++   + +V+    E++G+   +D+FP + R     ++ +   L +K +K+F   D   DQ +K   E      D +  LL++ + E +  +  LT  + K +L +++  G DT++    + M  +++ P  +K+AQ E+ EV+  +D+I+EE  I +L YL  V+
Sbjct:  125 RKMTVVELYTAKRVQSFQHTRKEEVASLVDFI-TQAASLEKPVNLNTKLMKLSGSVICRVVFGINLKGSKLENL---YEEVIQGTMEVVGSFAAADYFPIIGR-----IIDRITGLHSKCEKIFKAMDAFFDQSIKHHLEDESIKDDIIDLLLKMERGEIELGEFQLTRDNTKGILFNILNAGIDTSAQVMTWVMTYLISNPRVMKKAQAEVREVIKNKDDIIEED-IERLEYLKMVV 352          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11
Identity = 66/244 (27.05%), Postives = 122/244 (50.00%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLT-ILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTE----LLGTPNVSDFFP---GLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKM--DRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVG-----RDNIVEESHIYKLPYLFAVM 746
            RK+    MLS   + S    R+ ++R  +  I  RA +T      + L+ +L+  TN +   AV G    + G    ++ SE+TE    LL   N+ D+FP    +A   L+ +  K+R L  +++ +FD +I + ++     E  +   DF+  LL ++ E      LT  ++KA+L+DM   G +T+  + E+ MAE++N    +++ Q E+   +G     + +++ E  +  +PYL A +
Sbjct:  157 RKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKI--RAAATAAPPAAVDLSDLLSGYTNDVVSRAVLGASHRNQGRN--RLFSELTEINVSLLAGFNLEDYFPPNMAMADVLLRLVSVKARRLNQRWNDVFDELIQEHVQSRPSGESEESEADFIHVLLSIQQEYG----LTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVRTTMGSPDGKKLDMLAEEDLGSMPYLKATI 392          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11
Identity = 48/231 (20.78%), Postives = 113/231 (48.92%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVK-KSRALKNKFDKMFDLMIDQ-RLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+CV ++LS   + S   +R+ ++   +  +    G+ V V E++      V+    +G  ++  D+ S+     ++V E   +     + D +P     +L      + + ++ + D + D  +++ R+K + E G E  D +  L +++ +++ K P+T   +K  + +    G++ +S +  +A++E+M  P  + + Q E+ E +     V+ S + +L Y+ +V+
Sbjct:  129 RKICVSELLSPKNVRSFGFIRQEEIERLIRVMKQSEGAPVDVTEEVSKMSCFVVCRAAFGSVLK--DQGSLA----ELVKESLAMASGFELKDLYPSSWLLNLLSFNNYRLKRMRRRLDHVLDGFLEEHRVKKNGEFGGE--DIVDVLFRMQKDSNIKIPITSNGIKGFIFNTFSAGAEASSTTISWALSELMRNPAKMAKVQAEVREALKGKTSVDLSEMQELKYMRSVV 351          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.191e-11
Identity = 56/239 (23.43%), Postives = 113/239 (47.28%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRA--GSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRA-LKNKFDKMFDLMIDQRLKM-------DRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+CV ++LS  ++ S  ++R  ++   +  I + +  G  V   E++     ++     +G   +  D       F +++ E+  L    +V+D FP      + G  K+    +  K D + + +I++  K        D   G E+   +  LL+L ++   + P+   ++KA+++DM   G++T+S +T +AM EM+  P  + +AQ E+ E        +E+ +  L YL  V+
Sbjct:  128 RKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSSGELVNFKERVIWFTSSMTCRSAFGQLPKEQDM------FIKLIREVIRLAEGFDVADIFPSYKFLHVFGRAKRKLLNVHRKVDAIVEDVINEHKKNFATRKNDDHALGGEN--LIDVLLKLMNDKSLQFPINNDNIKAIIIDMFAAGTETSSTTTVWAMVEMLKNPRVLAKAQAEVREAFRNKVTFDENDVEDLKYLKLVI 358          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11
Identity = 50/159 (31.45%), Postives = 81/159 (50.94%), Query Frame = 3
Query:  279 EFRQVVSEMTELLGTPNVSDFFPGLAR-FDLQGLVKKSRALKNKFDKMFDLMI-DQRLKMDREC-GKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            + + +V E  ELLG  N SD  P LA  +D   + ++  AL  +       +I D RL+ D      ++ DF+  LL L+   +    L    + A+L +M+  G+DTT+  TE+ MAE++  P    R + E+D  VG D    +  + ++PYL AV+
Sbjct:  251 QLKSMVREGFELLGAFNWSDHLPWLAHLYDPNHVARRCAALVPRVQAFVRGVIRDHRLRRDSSSTAADNADFVDVLLSLEAHEN----LAEDDMVAVLWEMIFRGTDTTALVTEWCMAEVVRNPAVQARLRAEVDAAVGGDGCPSDGDVARMPYLQAVV 405          
The following BLAST results are available for this feature:
BLAST of CX296871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
C71AE_ARATH3.813e-1222.41Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH8.495e-1225.74Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C99A1_SORBI1.449e-1126.86Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C82A2_SOYBN1.449e-1122.22Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C78A1_MAIZE2.472e-1130.15Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C71BB_ARATH3.228e-1125.21Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71C2_MAIZE4.216e-1127.05Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C7D94_MENGR5.506e-1120.78Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71D6_SOLCH7.191e-1123.43Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C78AB_ORYSJ9.392e-1131.45Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]

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Properties
Property NameValue
Genbank descriptionC05803G04SK FerrChloL1 Citrus clementina cDNA clone C05803G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296871 ID=CX296871; Name=CX296871; organism=Citrus clementina; type=EST; length=746bp
GAAGCCTCGTGCCGAATTCGGCACGAGGCCTCGTGCCGAATTCGGCACCA
GGCGGCACGAGGAAAGTCTGTGTGCTCAAGATGCTCAGTAATACCACGTT
AGACTCCGTCTACGCGCTCCGTCGCCGTCAGCTCCGTGAGACTGTAGGTT
ATATTTACACTCGGGCCGGGTCAACCGTTGGCGTCGGTGAGCAACTGTTT
TTAACGATATTGAATGTGATAACGAACATGTTGTGGGGAGGCGCAGTGCA
AGGCGATGACAGGGCCAGCATTGGTGCGGAGTTTAGGCAAGTGGTGTCGG
AAATGACGGAGCTGTTGGGTACGCCCAATGTATCGGATTTCTTTCCCGGG
TTGGCCCGGTTCGACTTGCAAGGTTTGGTGAAGAAGTCGCGTGCGTTGAA
AAACAAGTTTGATAAGATGTTTGACCTGATGATTGATCAACGTCTGAAGA
TGGATAGAGAATGTGGGAAAGAGAGTAAAGATTTTCTGCAATTTCTGTTA
CAATTGAAGGATGAAGCTGATTCCAAGACACCTTTGACCATGATTCATGT
CAAAGCTCTGCTTATGGATATGGTGGTTGGTGGGTCAGATACAACCTCCA
ACTCAACTGAATTCGCCATGGCTGAAATGATGAACAAACCAGAAGGTATC
AAAAGAGCCCAGCAAGAATTGGACGAAGTTGTTGGCAGAGACAACATAGT
AGAAGAGTCCCACATTTACAAACTGCCATATCTATTTGCTGTAATG
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