CX296878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296878 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.145e-26 Identity = 50/98 (51.02%), Postives = 72/98 (73.47%), Query Frame = -1 Query: 456 DFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 749 +FA+LYV KW+ L++PP T+++VN++ I G++ + S + W L G +FF+ WV+ HLYPF KGL+GR+ R PTIV VWS LL+ I SLLWV ++P Sbjct: 1071 EFADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINP 1168
BLAST of CX296878 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.241e-26 Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = -1 Query: 456 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 746 FA+LY+ KWT L I P T++IVNLV IV G S I S WG L G +FF++WV+ H+YPF KGL+GR+ + PTIV VWS L++ SLLW+ + P Sbjct: 928 FADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSLWVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISP 1024
BLAST of CX296878 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24 Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = -1 Query: 456 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 746 FAELY +W+ L++PP T+++VN V I + + S + W L G FF+ WV+ HLYPF KGLLGR+ R PTIV VWS L++ I SLLWV ++P Sbjct: 1103 FAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSEFPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINP 1199
BLAST of CX296878 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.537e-24 Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = -1 Query: 411 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCG 746 +A+LY+ KW+SL+IPP + +VN++ IV I W L G FF+ WV+AHLYPF KGL+GR+ +TPTIV VW+ L+A SLLW ++P T A G G Sbjct: 996 YADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINPNTGPAAAAEGVGGGG 1107
BLAST of CX296878 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.537e-24 Identity = 55/109 (50.46%), Postives = 72/109 (66.06%), Query Frame = -1 Query: 420 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG 746 +A+LY+ KW+SLLIPP T+ +VN++ I + I S WG G FF+ WV+AHL PF KGL+GR+ +TPTIV VWS LL+ SLLWV + P +ANSNG Sbjct: 1034 YADLYIVKWSSLLIPPITIGMVNIIAIAFAFARTIYSDNPRWGKFIGGGFFSFWVLAHLNPFAKGLMGRRGKTPTIVFVWSGLLSITVSLLWVAISP-----PEANSNG 1137
BLAST of CX296878 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.472e-24 Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = -1 Query: 432 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKA 746 FAELY+ KWTSL IPP V+ +N++ +V GVS + + + L G FF+ WV+AH YPF KGL+GR+ RTPTIV VW+ L++ SLLW+ + P DD+ A Sbjct: 904 FAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP--PDDSVA 1006
BLAST of CX296878 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.472e-24 Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = -1 Query: 432 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKA 746 FAELY+ KWTSL IPP V+ +N++ +V GVS + + + L G FF+ WV+AH YPF KGL+GR+ RTPTIV VW+ L++ SLLW+ + P DD+ A Sbjct: 904 FAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP--PDDSVA 1006
BLAST of CX296878 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.963e-24 Identity = 48/96 (50.00%), Postives = 68/96 (70.83%), Query Frame = -1 Query: 462 DFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRV 749 +FA+LY+FKWT+L+IPP T++I+N+V I+ V + S W L G FFA WV+ H+YPF KGL+GR +TPT+V VWS L+A SLL++ + Sbjct: 871 EFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFASWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 966
BLAST of CX296878 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20 Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = -1 Query: 447 KWTSLLIPPTTVLIVNLVGIVAGVSWAINSGY-QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRT-PTIVIVWSILLASIFSLLWVRVDPFTS 725 +WT+LL+ PT+V++ NL G+VA V++ ++ GY QSWG L KL A WV+AHL FL+GLL ++R PTI ++WS++ S+ SLLWV F++ Sbjct: 754 RWTNLLVAPTSVVVANLAGVVAAVAYGVDHGYYQSWGALGAKLALAGWVVAHLQGFLRGLLAPRDRAPPTIAVLWSVVFVSVASLLWVHAASFSA 848
BLAST of CX296878 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.012e-16 Identity = 34/95 (35.79%), Postives = 60/95 (63.16%), Query Frame = -1 Query: 462 FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRV 746 +A+LYV +WT L+I P +++VN++G + ++ + W + G +FF WV+ HLYPF KG+LG+ +TP +V+VW I ++L++ + Sbjct: 824 YADLYVVRWTWLMITPIIIILVNIIGSAVAFAKVLDGEWTHWLKVAGGVFFNFWVLFHLYPFAKGILGKHGKTPVVVLVWWAFTFVITAVLYINI 918 The following BLAST results are available for this feature:
BLAST of CX296878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296878 ID=CX296878; Name=CX296878; organism=Citrus clementina; type=EST; length=758bpback to top |