CX296885

Overview
NameCX296885
Unique NameCX296885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14514 contig Ccv1_Contig14514:197..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.183e-15
Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDL-DMTEAFGATVRRKQDLCMIP 619
            G  + A   VI+N+WA  R+P  W  +   + PER   +   ++ T+ +++PFGAGRR+CPG+ F L   +L LA L+  F W+L  G   +D  D+ EA G  V RK  L + P
Sbjct:  379 GYDISAGTHVIINAWALQRNPAIWGLDANEYRPERHFWYEFGFQRTDSKFVPFGAGRRLCPGIGFSLVLSKLALANLVKRFNWRLKVGPVGDDKPDLAEASGIDVCRKFPLIVFP 493          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = -1
Query:  344 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 619
            G  +PA+++++VN+W    +P +W +PE F PERF +    V+  G +F Y+PFG GRR CPG+   L  + +TL  L+ +FE   P G    D
Sbjct:  388 GYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQID 481          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = -1
Query:  344 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 619
            G  +PA+++++VN+W    +P +W +PE F PERF +    V+  G +F Y+PFG GRR CPG+   L  + +TL  L+ +FE   P G    D
Sbjct:  387 GYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQID 480          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15
Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = -1
Query:  305 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRR 619
            G  +P    V++N+WA  RDP  WTE  +F PERF     + KG   + I FG GRR CPG    + ++ +TLA+L+  F+WKL NG K   +D+ E  G T+ +
Sbjct:  383 GYKVPQDTIVLINAWAIHRDPELWTEATTFKPERF-----EKKGELEKLIAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKLINGDK---IDLAERDGFTLTK 479          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.634e-15
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = -1
Query:  344 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 619
            G  +PA+++++VN+W    +P +W  PE F PERF++    V+  G +F Y+PFG GRR CPG+   L  + +TL  L+ +FE   P G    D
Sbjct:  387 GFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKID 480          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.634e-15
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = -1
Query:  344 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 619
            G  +PA+++++VN+W    +P +W  PE F PERF++    V+  G +F Y+PFG GRR CPG+   L  + +TL  L+ +FE   P G    D
Sbjct:  387 GFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKID 480          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15
Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = -1
Query:  320 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFG 619
            G  +PA+++++VN+W    +P  W +PE F PERF++    V+  G +F Y+PFG GRR CPG+   L  + +T+  L+ +FE   P G   + +D TE  G
Sbjct:  387 GYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPG--QDKVDTTEKGG 486          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15
Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = -1
Query:  338 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLD 619
            G  +PA+++++VN+W    +P  W +PE F PERF++    V+  G +F Y+PFG GRR CPG+   L  + +T+  L+ +FE   P G    D D
Sbjct:  387 GFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTD 482          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15
Identity = 37/95 (38.95%), Postives = 57/95 (60.00%), Query Frame = -1
Query:  344 TGPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 622
            +G  +PA+++++VN+W    +P  W +PE F PERF++    V+  G +F Y+PFG GRR CPG+   L  + +TL  L+ +FE   P G    D
Sbjct:  385 SGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKID 479          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15
Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = -1
Query:  344 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS--VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHED 619
            G  +PA+++++VN+W    +P +W +PE F PERF++    V+  G +F Y+PFG GRR CPG+   L  + +T+  L+ +FE   P G    D
Sbjct:  387 GYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGKSKID 480          
The following BLAST results are available for this feature:
BLAST of CX296885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
C71AR_ARATH1.183e-1538.26Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
TCMO_SOYBN2.017e-1539.36Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU2.017e-1539.36Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C81E1_GLYEC2.017e-1540.95Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
TCMO_POPTM2.634e-1539.36Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_POPKI2.634e-1539.36Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_ZINEL3.441e-1538.24Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_HELTU3.441e-1538.54Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_CICAR3.441e-1538.95Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_CATRO3.441e-1538.30Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]

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Properties
Property NameValue
Genbank descriptionC05803H06SK FerrChloL1 Citrus clementina cDNA clone C05803H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296885 ID=CX296885; Name=CX296885; organism=Citrus clementina; type=EST; length=622bp
TTTATTATCAAATACACACATAATGTGTGGTGAATTATTTCTTATATACA
AGTGCTGAAGCTCAGCTTGATTACTGTTATTAGTCACTAAACTATTAACA
AACTATATTAAGCTGAACATAACAACTTTAACTAATCAATCACGTGTACA
CATAATTTCATAATCACCAGGCATGACGTGGCATGCCACATCATCAATGT
GTAACTGATTGATCCTGCTACTATCATCCTCTGCTCTGCTGACTACACTA
CAAGTGTGAGCTTCCTTAACAGTGTGGAATAGGAATCATGCACAGATCTT
GTTTTCTTCTTACTGTCGCGCCAAAGGCCTCTGTCATGTCCAAATCCTCA
TGCTTCATTCCATTTGGTAGTTTCCATTCGAAATGGTATAATAACATCGC
GAGTGTAAGCTCCACGCTGGCCAGACCAAATGACATTCCAGGGCATATCC
TCCTACCAGCACCAAATGGGATGTACTCAAAATTAGTCCCCTTGTAGTCA
ACAGAATGGTCAATGAATCTCTCGGGAATAAAGCTCTCAGGTTCAGTCCA
ATACATGGGATCTCTTCCAGTTGCCCATGAATTAACAATGACTCTGGCTT
TTGCAGGAAGGGGGGGCCCGGT
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