CX296885

Overview
NameCX296885
Unique NameCX296885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14514 contig Ccv1_Contig14514:197..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.045e-32
Identity = 61/114 (53.51%), Postives = 81/114 (71.05%), Query Frame = -1
Query:  278 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 619
            G  +P K R++VN+WA GRDP  W  PE F PERFI++ VDY+G +FE +PFG+GRRICPGM  G+  VEL L  LLY F+W+ P+GM H+D+D  EA   TV +K  L ++P+
Sbjct:  386 GYDIPPKRRILVNTWAIGRDPTLWINPEEFNPERFINNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWRAPDGMTHKDIDTEEAGILTVVKKVPLKLVPV 499          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.045e-32
Identity = 60/114 (52.63%), Postives = 82/114 (71.93%), Query Frame = -1
Query:  278 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 619
            G  +P K  + VN WA  R+P  W +PE+FIPERF+D+ +DYKG NFE +PFG+GRRICPG+  G+A + LTL  LLY F+WKLP GM+ ED+D+ E++G    +K  L +IP+
Sbjct:  378 GYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLELIPV 491          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.900e-32
Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  +P K R+ VN WA GRDP  W +PE F+PERF+D+++D KG +FE +PFG GRRICP +  G   VE  LA LLYHF+WKLP G++ +D+D+ EA G TV +K +L ++P
Sbjct:  381 GYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVKDIDVEEAPGLTVNKKNELLLVP 493          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.012e-32
Identity = 61/114 (53.51%), Postives = 80/114 (70.18%), Query Frame = -1
Query:  278 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 619
            G  +P K  + VN WA  R+P  W +PE+FIPERF+D  +DYKG NFE +PFG+GRRICPG+  G+A V LTL  LLY F+WKLP GMK  D+D+ E++G    +K  L +IP+
Sbjct:  378 GYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLIPV 491          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.177e-31
Identity = 61/114 (53.51%), Postives = 82/114 (71.93%), Query Frame = -1
Query:  278 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 619
            G  +P K R++VN  A GRDP  WT P+ F PERF+D  VDY+G ++E +PFG+GRRICPGM  G+A+VEL L  LLY F+WKLP+GM H+D+D  EA   T+ +K  L ++P+
Sbjct:  386 GYDIPPKRRILVNVSAIGRDPKLWTNPKEFDPERFMDSFVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDTEEAGTLTIVKKVPLKLVPV 499          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.537e-31
Identity = 61/115 (53.04%), Postives = 84/115 (73.04%), Query Frame = -1
Query:  272 RVIVNSWATGRDPMYWTEPESFIPERFIDH-------SVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 595
            +VIVN+WA  R P  W +PE F PERF D        +VDY+G+ FEYIPFG+GRR+CPG +FGLA++EL +A LLY+F+W LP+GM+ E+LDM    G+T+RR+  L ++P P+
Sbjct:  396 KVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRNHLHLVPSPY 510          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.537e-31
Identity = 61/116 (52.59%), Postives = 84/116 (72.41%), Query Frame = -1
Query:  272 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 619
            G  +P+K  ++VN W+ GRDP +W  PE F PERFID  +DYKG +FE +PFG+GRRICPG++F +A+VEL L  LLYHF+W+LP   + +DLDM EA   T+ +K  L ++P+ H
Sbjct:  384 GYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLPE--EDKDLDMEEAGDVTIIKKVPLKLVPVLH 497          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.008e-31
Identity = 61/116 (52.59%), Postives = 78/116 (67.24%), Query Frame = -1
Query:  272 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 619
            G  +P    + +N++A GRDP YW +P  FIPERF+D  +DYKG +FE +PFGAGRRICPGM+ G+  VEL L  LLY F+W LPNGM  ED+DM E  G  + +K  L +I   H
Sbjct:  383 GYNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERFLDSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEGFAIAKKVPLVLIQTSH 498          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.425e-31
Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = -1
Query:  278 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 619
            G  +  K R+ VN WA GRDP  W +PE F+PERF+D  +D KG ++E +PFG+GRRICP +  G+ +VE  LA LLYHF+WKLP G+  ED+ M EA G T  +K DL ++P+
Sbjct:  385 GYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVEDIYMDEASGLTSHKKHDLLLVPV 498          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.425e-31
Identity = 59/112 (52.68%), Postives = 79/112 (70.54%), Query Frame = -1
Query:  275 LPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 610
            +PA+ + I+N+WA GRDP+ W  PE + PERF++   D KG NF+ +PFGAGRR CPG SF +A +EL LA L++ F++ LP G+K EDLDMTE  G T RRK  L ++  P
Sbjct:  393 IPARTQAIINAWAIGRDPLSWENPEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGITTRRKLPLLVVATP 504          
The following BLAST results are available for this feature:
BLAST of CX296885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
C71BG_ARATH4.045e-3253.51Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH4.045e-3252.63Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BW_ARATH6.900e-3253.10Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH9.012e-3253.51Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH1.177e-3153.51Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI1.537e-3153.04Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71BO_ARATH1.537e-3152.59Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71BZ_ARATH2.008e-3152.59Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH3.425e-3151.75Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME3.425e-3152.68Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC05803H06SK FerrChloL1 Citrus clementina cDNA clone C05803H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296885 ID=CX296885; Name=CX296885; organism=Citrus clementina; type=EST; length=622bp
TTTATTATCAAATACACACATAATGTGTGGTGAATTATTTCTTATATACA
AGTGCTGAAGCTCAGCTTGATTACTGTTATTAGTCACTAAACTATTAACA
AACTATATTAAGCTGAACATAACAACTTTAACTAATCAATCACGTGTACA
CATAATTTCATAATCACCAGGCATGACGTGGCATGCCACATCATCAATGT
GTAACTGATTGATCCTGCTACTATCATCCTCTGCTCTGCTGACTACACTA
CAAGTGTGAGCTTCCTTAACAGTGTGGAATAGGAATCATGCACAGATCTT
GTTTTCTTCTTACTGTCGCGCCAAAGGCCTCTGTCATGTCCAAATCCTCA
TGCTTCATTCCATTTGGTAGTTTCCATTCGAAATGGTATAATAACATCGC
GAGTGTAAGCTCCACGCTGGCCAGACCAAATGACATTCCAGGGCATATCC
TCCTACCAGCACCAAATGGGATGTACTCAAAATTAGTCCCCTTGTAGTCA
ACAGAATGGTCAATGAATCTCTCGGGAATAAAGCTCTCAGGTTCAGTCCA
ATACATGGGATCTCTTCCAGTTGCCCATGAATTAACAATGACTCTGGCTT
TTGCAGGAAGGGGGGGCCCGGT
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