CX296885

Overview
NameCX296885
Unique NameCX296885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14514 contig Ccv1_Contig14514:197..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.544e-28
Identity = 55/106 (51.89%), Postives = 70/106 (66.04%), Query Frame = -1
Query:  278 RVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 595
            +V+VN WA GRDP  W  P  F PERF+   +D +G ++E  PFGAGRRICPGM   + +V L LA LLY F+WKLP G+  EDLDM E FG T+ +   L  +P+
Sbjct:  400 QVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHAVPV 505          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.544e-28
Identity = 62/128 (48.44%), Postives = 84/128 (65.62%), Query Frame = -1
Query:  257 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFI----DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKH--EDLDMTEAFGATVRRKQDLCMIP-IPHC*GSS 619
            G  +PA  RVIVN+WA  RDP  W + E F PERF+    D  VD  G +  ++PFGAGRRIC G +F +A+VE+ LA L+YHF+W++P  M+     +DM++ FG T+RR Q L ++P IP C  SS
Sbjct:  408 GYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLVPRIPKCVSSS 535          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28
Identity = 56/117 (47.86%), Postives = 77/117 (65.81%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSV----DYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  +PA  RV+VN+WA GR   YW     F+PERF+   V    D K   F+++ FG+GRR+CPG+    A++E  L+ L+Y F+W+LP GMK ED+DMTE FG TV RK+ L ++P
Sbjct:  419 GYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVP 535          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28
Identity = 55/113 (48.67%), Postives = 78/113 (69.03%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  +P  A + ++++A GRDP  WT PE F PERF + S++YKG ++E +PFGAGRR CPGM+ G+  +EL L  +LY+F+W LPNGM  +D+DM E    T+ +K  L +IP
Sbjct:  385 GYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERFANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPLELIP 497          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28
Identity = 56/117 (47.86%), Postives = 77/117 (65.81%), Query Frame = -1
Query:  269 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPHC 619
            G  +PAK RV+VN+ +   DP  W  P  F+PERF+   +D+KG +FE +PFG GRR CPG++F +  VEL LA LL+ F+W+LP G+  +DLDM EA G T+ +K  L +   P C
Sbjct:  382 GFEIPAKTRVLVNAKSIAMDPCCWENPNEFLPERFLVSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIGITIHKKAHLWLKATPFC 498          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.045e-28
Identity = 53/111 (47.75%), Postives = 74/111 (66.67%), Query Frame = -1
Query:  278 LPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 610
            +P   +V+VN WA GRD   W  P  F PERF+    D KG +FE IPFG+GRR+CPG+S  L ++ + LA LLY F+WKL NG+   ++DM+E FG T+ + + LC +P+
Sbjct:  396 VPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVPV 506          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28
Identity = 55/111 (49.55%), Postives = 71/111 (63.96%), Query Frame = -1
Query:  278 LPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 610
            +P   +V VN WA GRDP  W     F PERF+   +D +G ++E  PFGAGRRICPG+   + +V L LA LLY F+WKLPNG+  EDLDM E FG T+ +   L  +P+
Sbjct:  396 VPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAVPV 506          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28
Identity = 54/113 (47.79%), Postives = 78/113 (69.03%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  +P  A V +N++A GRDP  WT PE F PERF++ S++YKG ++E +PFGAGRR CPGM+ G+  +EL L  +LY+F+W LP+GM  +D+DM E     + +K  L ++P
Sbjct:  383 GYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVP 495          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28
Identity = 51/116 (43.97%), Postives = 79/116 (68.10%), Query Frame = -1
Query:  272 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 619
            G  +P K ++++N ++  RDP  WT P+ F P+RF+D S+DY+G NFE +PFG+GRRICPGM+ G+ +VEL L  LLY F+W +P G   +D+++ E     + +K  L ++P+ H
Sbjct:  388 GYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLELVPLVH 503          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  +P   +V+VN+WA GRDP YW  P  F PERF++  VD KG N+E IPFGAGRR+C G+  G   +  T   LL+ F+W+LP+ +  + ++M E+ G T R+KQ L +IP
Sbjct:  352 GYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPLKVIP 464          
The following BLAST results are available for this feature:
BLAST of CX296885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
C76C1_ARATH3.544e-2851.89Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71C1_MAIZE3.544e-2848.44Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71C4_MAIZE4.629e-2847.86Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71B8_ARATH4.629e-2848.67Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71A9_SOYBN4.629e-2847.86Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C76C3_ARATH6.045e-2847.75Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH7.895e-2849.55Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C71BU_ARATH7.895e-2847.79Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH7.895e-2843.97Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME5.117e-2746.90Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionC05803H06SK FerrChloL1 Citrus clementina cDNA clone C05803H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296885 ID=CX296885; Name=CX296885; organism=Citrus clementina; type=EST; length=622bp
TTTATTATCAAATACACACATAATGTGTGGTGAATTATTTCTTATATACA
AGTGCTGAAGCTCAGCTTGATTACTGTTATTAGTCACTAAACTATTAACA
AACTATATTAAGCTGAACATAACAACTTTAACTAATCAATCACGTGTACA
CATAATTTCATAATCACCAGGCATGACGTGGCATGCCACATCATCAATGT
GTAACTGATTGATCCTGCTACTATCATCCTCTGCTCTGCTGACTACACTA
CAAGTGTGAGCTTCCTTAACAGTGTGGAATAGGAATCATGCACAGATCTT
GTTTTCTTCTTACTGTCGCGCCAAAGGCCTCTGTCATGTCCAAATCCTCA
TGCTTCATTCCATTTGGTAGTTTCCATTCGAAATGGTATAATAACATCGC
GAGTGTAAGCTCCACGCTGGCCAGACCAAATGACATTCCAGGGCATATCC
TCCTACCAGCACCAAATGGGATGTACTCAAAATTAGTCCCCTTGTAGTCA
ACAGAATGGTCAATGAATCTCTCGGGAATAAAGCTCTCAGGTTCAGTCCA
ATACATGGGATCTCTTCCAGTTGCCCATGAATTAACAATGACTCTGGCTT
TTGCAGGAAGGGGGGGCCCGGT
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