CX296885

Overview
NameCX296885
Unique NameCX296885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14514 contig Ccv1_Contig14514:197..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 55/114 (48.25%), Postives = 79/114 (69.30%), Query Frame = -1
Query:  281 LPAKARVIVNSWATGRDPMYWTEPESFIPERFIDH----SVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 610
            +PA  RV+V++WA GRD   W +PE F+PERF+       V  KG +  +IPFG+GRRICPGM+FG A++E+ LA L+YHF+W++P       + M E+FG T+RRK+ L ++P
Sbjct:  421 VPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPG--SGAGVSMEESFGLTLRRKEKLLLVP 532          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.729e-27
Identity = 51/85 (60.00%), Postives = 68/85 (80.00%), Query Frame = -1
Query:  365 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLP 619
            G  +PAK RV +N+WA GRDP  W   E F+PERF+++SVD+KG +F+ IPFGAGRR CPG++FG++SVE++LA LLY F W+LP
Sbjct:  385 GYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELP 469          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.489e-26
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = -1
Query:  305 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRR 619
            G  +P    V++N+WA GRDP  W EPE F PERF++ SVD+KG +FE IPFGAGRR CPG +F +A++E TLA L+  F+W+LP+  +  +LDM+E  G  +RR
Sbjct:  389 GYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECR--ELDMSERPGVAIRR 491          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.945e-26
Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = -1
Query:  278 RVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 595
            R+ VN+WA GR+P  W +P+ FIPERF+D +V+ KGT+FE +PFG+GRR CP M  GL++VE TLA LLYHF+WK       E++ + EA G T  RK  L ++P+
Sbjct:  396 RIHVNAWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWKAT-----EEVSVEEAPGLTSHRKHPLHLVPV 496          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25
Identity = 55/119 (46.22%), Postives = 75/119 (63.03%), Query Frame = -1
Query:  272 GPPLPAKARVIVNSWATGRDPMYWTE-PESFIPERFIDH--SVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 619
            G  +PAK  + VN+WA  RD   W + P  FIPERF++    VD+KG +FE +PFG+GRR+CP M  G+A VE+  A LLY F+W LP G+K ED+ M    G  + +K+ L + P  H
Sbjct:  380 GYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25
Identity = 51/116 (43.97%), Postives = 75/116 (64.66%), Query Frame = -1
Query:  275 TGPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 622
            +G  +PA   V VN+WA GRDP  W +   F P+RF++  +D +G +F+ IPFGAGRRICPG+      V + L  LL +F+WK+   + ++ LDMTE  G T+ + + LC++PIP
Sbjct:  373 SGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVVPIP 488          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.646e-25
Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  +PA   V VN+WA  RD   W   P+ F PERF++  VD+KGT++E+IPFG+GRR+CPGM  G A +E+  A LL  F +KLPNGMK +D++M    G  + + Q L ++P
Sbjct:  383 GYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVP 496          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.150e-25
Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = -1
Query:  365 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLP 619
            G  +PAK ++++N++A  RDP  WT P+ F P+RF+D S+DY+G NFE +PFG+GRRICPGM+ G+A VEL L  LLY F+W LP
Sbjct:  382 GYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLP 466          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.256e-25
Identity = 48/110 (43.64%), Postives = 74/110 (67.27%), Query Frame = -1
Query:  281 LPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 610
            +P   +++VN+W  GRDP  WT+P +F PERF++ SVD++G +F  IPFGAGRRICPG+      + L +A  + + +W LPNGM  + L + E FG T++++  L ++P
Sbjct:  374 IPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 483          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.067e-24
Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = -1
Query:  365 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLP 619
            G  +PAK ++++N +A  RDP  WT P+ F P+RF+D S+DYKG NFE +PFG+GRRICPGM+ G+  VE  L  LLY F+W LP
Sbjct:  382 GYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLP 466          
The following BLAST results are available for this feature:
BLAST of CX296885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
C71C2_MAIZE5.117e-2748.25Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71A1_PERAE8.729e-2760.00Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71A8_MENPI1.489e-2652.38Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C71B6_ARATH1.945e-2651.89Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C83B1_ARATH1.260e-2546.22Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU1.260e-2543.977-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C83A1_ARATH1.646e-2547.37Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BS_ARATH2.150e-2556.47Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C80B1_ESCCA6.256e-2543.64(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71BT_ARATH1.067e-2455.29Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05803H06SK FerrChloL1 Citrus clementina cDNA clone C05803H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296885 ID=CX296885; Name=CX296885; organism=Citrus clementina; type=EST; length=622bp
TTTATTATCAAATACACACATAATGTGTGGTGAATTATTTCTTATATACA
AGTGCTGAAGCTCAGCTTGATTACTGTTATTAGTCACTAAACTATTAACA
AACTATATTAAGCTGAACATAACAACTTTAACTAATCAATCACGTGTACA
CATAATTTCATAATCACCAGGCATGACGTGGCATGCCACATCATCAATGT
GTAACTGATTGATCCTGCTACTATCATCCTCTGCTCTGCTGACTACACTA
CAAGTGTGAGCTTCCTTAACAGTGTGGAATAGGAATCATGCACAGATCTT
GTTTTCTTCTTACTGTCGCGCCAAAGGCCTCTGTCATGTCCAAATCCTCA
TGCTTCATTCCATTTGGTAGTTTCCATTCGAAATGGTATAATAACATCGC
GAGTGTAAGCTCCACGCTGGCCAGACCAAATGACATTCCAGGGCATATCC
TCCTACCAGCACCAAATGGGATGTACTCAAAATTAGTCCCCTTGTAGTCA
ACAGAATGGTCAATGAATCTCTCGGGAATAAAGCTCTCAGGTTCAGTCCA
ATACATGGGATCTCTTCCAGTTGCCCATGAATTAACAATGACTCTGGCTT
TTGCAGGAAGGGGGGGCCCGGT
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