CX296885

Overview
NameCX296885
Unique NameCX296885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14514 contig Ccv1_Contig14514:197..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.105e-24
Identity = 47/110 (42.73%), Postives = 73/110 (66.36%), Query Frame = -1
Query:  281 LPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 610
            +P   +++VN+W  GRDP  W +P +F PERF++ SVD++G +F  IPFGAGRRICPG+      + L +A  + + +W LPNGM  + L + E FG T++++  L ++P
Sbjct:  375 IPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 484          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.055e-24
Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = -1
Query:  254 LPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS---VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPHC*GSSH 610
            +P   R+IVN WA GRDP  W  P  F PERF+      +D +G +FE IPFGAGRRIC G   G ASVE  L  L++ F+WKLP+G+   +++M E+FG  +++K  L  I  P    SS+
Sbjct:  402 IPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGV--VEVNMEESFGIALQKKVPLSAIVTPRLPPSSY 521          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.055e-24
Identity = 54/116 (46.55%), Postives = 75/116 (64.66%), Query Frame = -1
Query:  275 GPPLPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 619
            G  + A  +VI+N+WA  RD M W  + E F PER +D  VD++GTNFE+IPFG+GRRICPG+ F +A VE+TLA L+  F W++      ++ D+ E+ G  V RK  L + P P
Sbjct:  381 GYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMEVQHSGDEYDLAESTGLDVCRKFPLIVFPSP 496          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.296e-24
Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = -1
Query:  320 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFG 619
            G  +P  A V+VN WA  RDP  W+ P  + PERF++ ++D KG++F  +PFGAGRR+CPG   G+  V   +  LL+HFEW LP G + ED++M E+ G
Sbjct:  383 GYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPG 482          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.916e-24
Identity = 49/113 (43.36%), Postives = 71/113 (62.83%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  +P   +V+VN+WA GRDP  W +P SF PERF+   +D KG ++  IPFGAGRR+C G+  G   +   L  LL  FEW+LP+G+  + ++M  + G T R++  L +IP
Sbjct:  390 GYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVIP 502          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.180e-23
Identity = 53/114 (46.49%), Postives = 74/114 (64.91%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  + A  +VI N+WA  RD + W  + E F PER +D  +D++GTNFEYIPFG+GRRICPG+ F +A VE+TLA L+  F W++   +  ++ D+ EA G  V RK  L + P
Sbjct:  380 GYDIAAGTQVITNAWAIQRDIVTWGIDAEEFRPERHLDSPLDFRGTNFEYIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMDARLSGDEYDLAEATGIDVCRKFPLIVFP 493          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.628e-23
Identity = 51/114 (44.74%), Postives = 75/114 (65.79%), Query Frame = -1
Query:  272 LPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIPH 610
            +PA  +V++N+WA GR+   W  + E F PER +D SVD++G NFE +PFGAGRRICP +SF +   E+ LA L++ F+WKLP   K +  D+ E+ G +V R+  L  +  P+
Sbjct:  375 IPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKEDKTDVAESSGFSVHREFPLYAVASPY 488          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23
Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = -1
Query:  275 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS---VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 619
            G  +PAK R+ VN WA GRDP +W  P  F PERF ++    +D +G ++ +IPFG+GRR CPG S  L  V + LA+++  F+WK  NG  +  +DM E  G T+ R   +  +P+P
Sbjct:  379 GYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNG--NNKVDMEEKSGITLPRAHPIICVPVP 494          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23
Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = -1
Query:  368 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKL 619
            G  +PAK +++VN +A GRDP  W   + F P+RF+D SVD+KG N+E+IPFG+GRRICPGM+ G   VE+ L  LLY F+W L
Sbjct:  382 GYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGL 465          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.987e-23
Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  +P    V VN+ A GRDP  W +P  F PERF+D  ++Y G  F++IPFG+GRRICPG    +  + L LA L++ F W+LP+G+ +E LDM E F  ++   + L +IP
Sbjct:  371 GYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIP 483          
The following BLAST results are available for this feature:
BLAST of CX296885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
C80B2_ESCCA3.105e-2442.73(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C75A6_CAMME4.055e-2445.90Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71AE_ARATH4.055e-2446.55Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI5.296e-2447.00Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C76A2_SOLME6.916e-2443.36Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71AF_ARATH1.180e-2346.49Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH2.628e-2344.74Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN7.647e-2342.37Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71BF_ARATH7.647e-2354.76Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST9.987e-2344.25Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC05803H06SK FerrChloL1 Citrus clementina cDNA clone C05803H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296885 ID=CX296885; Name=CX296885; organism=Citrus clementina; type=EST; length=622bp
TTTATTATCAAATACACACATAATGTGTGGTGAATTATTTCTTATATACA
AGTGCTGAAGCTCAGCTTGATTACTGTTATTAGTCACTAAACTATTAACA
AACTATATTAAGCTGAACATAACAACTTTAACTAATCAATCACGTGTACA
CATAATTTCATAATCACCAGGCATGACGTGGCATGCCACATCATCAATGT
GTAACTGATTGATCCTGCTACTATCATCCTCTGCTCTGCTGACTACACTA
CAAGTGTGAGCTTCCTTAACAGTGTGGAATAGGAATCATGCACAGATCTT
GTTTTCTTCTTACTGTCGCGCCAAAGGCCTCTGTCATGTCCAAATCCTCA
TGCTTCATTCCATTTGGTAGTTTCCATTCGAAATGGTATAATAACATCGC
GAGTGTAAGCTCCACGCTGGCCAGACCAAATGACATTCCAGGGCATATCC
TCCTACCAGCACCAAATGGGATGTACTCAAAATTAGTCCCCTTGTAGTCA
ACAGAATGGTCAATGAATCTCTCGGGAATAAAGCTCTCAGGTTCAGTCCA
ATACATGGGATCTCTTCCAGTTGCCCATGAATTAACAATGACTCTGGCTT
TTGCAGGAAGGGGGGGCCCGGT
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