CX296885

Overview
NameCX296885
Unique NameCX296885
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14514 contig Ccv1_Contig14514:197..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21
Identity = 50/114 (43.86%), Postives = 67/114 (58.77%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  + A   VI+N+WA  RD   W  + E F PER +D  +DY G N  YIPFG+GRRICPG++  L   E+T+A L+  F+W++  G   +  D+TEA G  V RK  L   P
Sbjct:  380 GYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAGPNGDQPDLTEAIGIDVCRKFPLIAFP 493          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21
Identity = 50/114 (43.86%), Postives = 73/114 (64.04%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  +PA  +VIVN+WA  RD   W T+ E F PER +D ++D++G +F++IPFG+G+RICPG+ F  A + +TLA ++  F W++    +    D+TEA G  V RK  L  IP
Sbjct:  381 GYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIP 494          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20
Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = -1
Query:  305 LPAKARVIVNSWATGRDPMYWTEPESFIPERFI---DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRR 610
            +P   R+ VN WA GRDP  W  P  F PERF+   +  +D +G +FE IPFGAGRRIC G   G+  VE  L  L++ F+WKLP+ +   +L+M EAFG  +++
Sbjct:  385 IPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEV--IELNMEEAFGLALQK 487          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20
Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = -1
Query:  305 LPAKARVIVNSWATGRDPMYWTEPESFIPERFI---DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRR 610
            +P   R+ VN WA GRDP  W  P  F PERF+   +  +D +G +FE IPFGAGRRIC G   G+  VE  L  L++ F+WKLP+ +   +L+M EAFG  +++
Sbjct:  385 IPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEV--IELNMEEAFGLALQK 487          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.059e-20
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = -1
Query:  275 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS---VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 619
            G  +P   R+ VN WA GRDP  W  P  F P+RF++     +D +G +FE IPFGAGRRIC G   G+  VE  L  L++ F+W+LP+ +   +L+M E FG  +++   L  +  P
Sbjct:  386 GHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELPSSV--IELNMDEPFGLALQKAVPLAAMVTP 501          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.059e-20
Identity = 48/114 (42.11%), Postives = 71/114 (62.28%), Query Frame = -1
Query:  281 GPPLPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIP 619
            G  +PA  +VI+N+WA  RD   W  + E F PER +D  +D++G +F++IPFG+G+RICPG+ F  A + +TLA ++  F W++    +    D+TEA G  V RK  L  IP
Sbjct:  374 GYNIPAGTQVIINAWAIQRDTTTWGIDAEEFRPERHLDSILDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIP 487          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.913e-20
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = -1
Query:  278 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS---VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPI 619
            G  +PAK R+ VN WA GRDP +W  P  F PERF+++    +D +G ++  +PFG+GRR CPG S  L  V + LA+L+  F+WK+     +  ++M E  G T+ R   +  +PI
Sbjct:  387 GYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKV--DCDNGKVNMEEKAGITLPRAHPIICVPI 501          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.913e-20
Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = -1
Query:  275 LPAKARVIVNSWATGRDPMYWTE-PESFIPERFI---DHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 610
            +P   R+ VN WA GRDP  W + P  F PERF+   +  +D +G +FE IPFGAGRRIC G   G+  VE  L  L++ F+WKL  G   ++L+M E FG  +++   L  + IP
Sbjct:  394 IPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKL--GFSEDELNMDETFGLALQKAVPLAAMVIP 507          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.913e-20
Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = -1
Query:  305 LPAKARVIVNSWATGRDPMYW-TEPESFIPERFIDHSVDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRR 610
            +PA  +V++N+WA GR+   W  + E F PER +D SVDY+G  FE IPFG+GRRICP +SF +   E+ LA L++ F+W+L      +  ++ E+ G  + R
Sbjct:  375 IPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTEDQTEVAESTGIAIHR 477          
BLAST of CX296885 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.034e-19
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = -1
Query:  275 GPPLPAKARVIVNSWATGRDPMYWTEPESFIPERFIDHS---VDYKGTNFEYIPFGAGRRICPGMSFGLASVELTLAMLLYHFEWKLPNGMKHEDLDMTEAFGATVRRKQDLCMIPIP 619
            G  +P   R+ VN WA GRDP  W  P  F P+RF++     +D +G +FE IPFGAGRRIC G   G+  VE  L  L++ F W+LP+ +   +L+M E+FG  +++   L  +  P
Sbjct:  386 GHYIPKGTRLSVNIWAIGRDPSVWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFVWELPSSV--IELNMDESFGLALQKAVPLAAMVTP 501          
The following BLAST results are available for this feature:
BLAST of CX296885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
C71AD_ARATH4.196e-2143.86Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH5.480e-2143.86Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C75A3_PETHY1.595e-2045.71Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C75A1_PETHY1.595e-2045.71Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C75A5_EUSGR6.059e-2040.68Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71AJ_ARATH6.059e-2042.11Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN7.913e-2040.17Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C75A4_GENTR7.913e-2043.10Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71AQ_ARATH7.913e-2042.72Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C75A7_EUSGR1.034e-1940.68Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]

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Properties
Property NameValue
Genbank descriptionC05803H06SK FerrChloL1 Citrus clementina cDNA clone C05803H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296885 ID=CX296885; Name=CX296885; organism=Citrus clementina; type=EST; length=622bp
TTTATTATCAAATACACACATAATGTGTGGTGAATTATTTCTTATATACA
AGTGCTGAAGCTCAGCTTGATTACTGTTATTAGTCACTAAACTATTAACA
AACTATATTAAGCTGAACATAACAACTTTAACTAATCAATCACGTGTACA
CATAATTTCATAATCACCAGGCATGACGTGGCATGCCACATCATCAATGT
GTAACTGATTGATCCTGCTACTATCATCCTCTGCTCTGCTGACTACACTA
CAAGTGTGAGCTTCCTTAACAGTGTGGAATAGGAATCATGCACAGATCTT
GTTTTCTTCTTACTGTCGCGCCAAAGGCCTCTGTCATGTCCAAATCCTCA
TGCTTCATTCCATTTGGTAGTTTCCATTCGAAATGGTATAATAACATCGC
GAGTGTAAGCTCCACGCTGGCCAGACCAAATGACATTCCAGGGCATATCC
TCCTACCAGCACCAAATGGGATGTACTCAAAATTAGTCCCCTTGTAGTCA
ACAGAATGGTCAATGAATCTCTCGGGAATAAAGCTCTCAGGTTCAGTCCA
ATACATGGGATCTCTTCCAGTTGCCCATGAATTAACAATGACTCTGGCTT
TTGCAGGAAGGGGGGGCCCGGT
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