CX296888

Overview
NameCX296888
Unique NameCX296888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length591
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.446e-28
Identity = 60/142 (42.25%), Postives = 91/142 (64.08%), Query Frame = -1
Query:  160 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 585
            ++K + E+ + +     ++ S++  L Y+++V+KET RLHP  PL +PR++  + EI GF +   +++L+NAW+IGRD   W++P  F PERF     D  G +FE IPFGAG+RICPGL   +  + I L  L+  FDWKL
Sbjct:  319 MAKVQAEVREALKGKTSVDLSEMQELKYMRSVVKETLRLHPPFPL-IPRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKL 459          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.467e-28
Identity = 62/174 (35.63%), Postives = 103/174 (59.20%), Query Frame = -1
Query:   85 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWD-NPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKF----GITLQKAQPLRAVP 591
            + + K + E+  +  +G  + E +  ++ YLQAV+KE  RL P APL +PR  S DV + G+ +  G++V++NAWAI RD +TW  +   F PER L S LD +G++F+ IPFG+G+RICPG+     ++ + L +++  F+W++               G+ + +  PL A+P
Sbjct:  314 KVMKKLQEEIRSSSRQGLFVTEKEAEKMDYLQAVIKEALRLRPPAPLMVPRVFSEDVTLKGYNIPAGTQVIINAWAIQRDTTTWGIDAEEFRPERHLDSILDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIP 487          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.222e-28
Identity = 60/140 (42.86%), Postives = 88/140 (62.86%), Query Frame = -1
Query:  169 SKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL--GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFD 582
            +K R E+++ +G G  + E D+ +LPYLQAV+KET RL    PL +P     D +++GF +   SK+LVNAW +  + + W  P  F PERFL   S ++  G +F  +PFG GRR CPG+ LA+ +L I LG L+ +F+
Sbjct:  329 NKVREEIDRVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 468          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.222e-28
Identity = 63/143 (44.06%), Postives = 85/143 (59.44%), Query Frame = -1
Query:  169 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL--GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFD 591
            E   K R ELE  +G G  + E D  +LPYLQAV+KET RL    PLFLP     D ++ G+ +   SK+LVNAW +  +   W  P  F PERFL   S ++  G +F  +PFG GRR CPG+ LA+ +L I +G L+ +F+
Sbjct:  327 EIQKKLRDELETVLGPGVQITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28
Identity = 62/143 (43.36%), Postives = 86/143 (60.14%), Query Frame = -1
Query:  169 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL--GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFD 591
            E   K R EL+  +G G  + E D  +LPYL AV+KET RL    PL +P     D ++ GF +   SK+LVNAW +  + + W NP  F PERFL  G+ ++  G +F  +PFG GRR CPG+ LA+ +L I LG L+ +F+
Sbjct:  327 EIQKKLRHELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28
Identity = 56/144 (38.89%), Postives = 87/144 (60.42%), Query Frame = -1
Query:  160 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            E ++KA+ E+   +      +  D+  L Y+++V+KET R+HP  PL +PR    + E+ G+T+   +++++N W++GR+   W+ P  F PERF     D  G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL
Sbjct:  322 EVMAKAQAEVRAALKGKTDWDVDDVQELKYMKSVVKETMRMHPPIPL-IPRSCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKL 464          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28
Identity = 63/174 (36.21%), Postives = 102/174 (58.62%), Query Frame = -1
Query:   85 KARLELEQTIGRGKPLE----ESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPL-IFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKF----GITLQKAQPLRAVP 579
            K   +L++ I    P +    E +  ++ YLQAV+KE  RL P APL +PR  S DV++ G+ +  G++V+VNAWAI RD +TW      F PER L ++LD +G++F+ IPFG+G+RICPG+     ++ + L +++  F+W++               G+ + +  PL A+P
Sbjct:  321 KVMKKLQEEIRSSSPQDLFVTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIP 494          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 58/139 (41.73%), Postives = 87/139 (62.59%), Query Frame = -1
Query:  169 KARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL--GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFD 579
            K R E+++ +G    + E D  +LPYLQAV+KET RL    PL +P     D ++AG+ +   SK+LVNAW +  + + W +P +F PERFL   S ++  G +F  IPFG GRR CPG+ LA+ +L I +G ++ +F+
Sbjct:  331 KLRAEIDRVLGPDHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFE 469          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 61/143 (42.66%), Postives = 89/143 (62.24%), Query Frame = -1
Query:  169 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL--GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFD 591
            E   K R EL+  +G G  + E D+ +LPYLQAV+KET R     PL +P     D ++AG+ +   SK+LVNAW +  + + W+ P  F PERFL   S ++  G +F+ IPFG GRR CPG+ LA+ +L I++G L+ +F+
Sbjct:  328 EIQKKLRHELDTVLGAGVQICEPDVQKLPYLQAVIKETLRYRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFE 470          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 7.177e-28
Identity = 59/143 (41.26%), Postives = 88/143 (61.54%), Query Frame = -1
Query:  169 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSD--LDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFD 591
            E  +K R E+++ +G G  + E D+ +LPYLQAV+KET RL    PL +P     D ++ GF +   SK+LVNAW +  + + W  P  F PERFL  +  ++  G +F  +PFG GRR CPG+ LA+ +L I +G L+ +F+
Sbjct:  327 EIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
The following BLAST results are available for this feature:
BLAST of CX296888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
C7D94_MENGR1.446e-2842.25Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71AJ_ARATH2.467e-2835.63Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
TCMO_CICAR3.222e-2842.86Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_CATRO3.222e-2844.06Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_POPKI4.208e-2843.36Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C71DD_MENPI4.208e-2838.89Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71AK_ARATH4.208e-2836.21Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
TCMO_RUTGR7.177e-2841.73Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_PETCR7.177e-2842.66Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_PEA7.177e-2841.26Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionC05803H09SK FerrChloL1 Citrus clementina cDNA clone C05803H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296888 ID=CX296888; Name=CX296888; organism=Citrus clementina; type=EST; length=591bp
AAATTAATTAACCAATGATAAAGTGCTTTATTGGCTATAAACTATATATA
CATATACATATATGATGTGGGGCTAAATGGCCATAGGGACAGCACGAAGG
GGTTGAGCCTTCTGTAAGGTTATACCAAATTTCTCTTCCATGTCCATCTT
CTCATCTTCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCTAACATTA
TATGTAACATTCTGATTGCCAATGGCAAACCAGGACAAATGCGTCGCCCA
GCTCCAAAGGGGATTAGCTCAAAATTGCGGCCTTTGACATCAAGATCTGA
TCCCAAGAACCTTTCGGGCATGAAAATGAGAGGGTTGTCCCATGTGCTTT
CATCTCTGCCAATAGCCCACGCATTGACTAAAACTTTTGAACCTTTTTGC
ACTGTGAAGCCAGCGATCTCTACGTCTGTTGAGGCTTTACGGGGGAGAAA
TAAGGGAGCTACTGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCTTGTA
GATAAGGTAATCGAGTGATGTCTGATTCCTCAAGTGGTTTGCCCCTGCCA
ATTGTTTGTTCCAGCTCCAATCTTGCTTTTGATAAAGCCTC
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