CX296888

Overview
NameCX296888
Unique NameCX296888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length591
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.334e-25
Identity = 60/171 (35.09%), Postives = 96/171 (56.14%), Query Frame = -1
Query:   82 KARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERF-----LGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKFGITLQKAQPLRAVPM 579
            + R E++  +G+ + ++E+D+  LPYLQA++KE  RLHP  P+   R      EI GF + + +++ VN +AI RD   W++P  F PERF     LG + + +    + IPFG+GRR CPG  LA  ++  ++G ++  FDW +            +TL  A PL+  P+
Sbjct:  337 RLREEIDSVVGKTRLVQETDLPNLPYLQAIVKEGLRLHPPGPVV--RTFKETCEIKGFYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFLASSRLGEEDEKREDMLKYIPFGSGRRACPGSHLAYTVVGSVIGMMVQHFDWIIKGEKINMKEGGTMTLTMAHPLKCTPV 505          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.334e-25
Identity = 56/146 (38.36%), Postives = 89/146 (60.96%), Query Frame = -1
Query:  160 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLG--SDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            E L KA  E+++ +G+ + ++ESDI +L Y++A+++E FRLHPVA   LP  A +D  +AG+ + KGS+VL++ + +GR+   W +PL F PER L   S++ +   +   I F  G+R C    L   +  +ML  L+  F WKL
Sbjct:  359 EILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKL 504          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.354e-25
Identity = 56/146 (38.36%), Postives = 89/146 (60.96%), Query Frame = -1
Query:  160 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLG--SDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            E L KA  E+++ +G+ + ++ESDI +L Y++A+L+E FRLHPVA   LP  A +D  +AG+ + KGS+VL++ + +GR+   W +PL F PER L   S++ +   +   I F  G+R C    L   +  ++L  L+  F WKL
Sbjct:  358 EILRKAMEEIDRVVGKERLVQESDIPKLNYVKAILREAFRLHPVAAFNLPHVALSDATVAGYHIPKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKL 503          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 4.354e-25
Identity = 58/145 (40.00%), Postives = 85/145 (58.62%), Query Frame = -1
Query:  166 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL---GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDW 591
            E ++KA  EL++ +GR + ++ESDI +L Y++A ++E FRLHPVAP  +P  A  D  IAG+ V KGS V+++   +GR+   WD PL F P+R L    SD+ +   +   I F  GRR C    L   M  ++ G L+  F W
Sbjct:  372 EVMAKAMEELDRVVGRERLVQESDIPKLNYVKACIREAFRLHPVAPFNVPHVALADTTIAGYRVPKGSHVILSRTGLGRNPRVWDEPLRFYPDRHLATAASDVALTENDLRFISFSTGRRGCIAASLGTAMSVMLFGRLLQGFTW 516          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 5.687e-25
Identity = 55/145 (37.93%), Postives = 83/145 (57.24%), Query Frame = -1
Query:  160 EALSKARLELEQTIGRGKPLE-ESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            E ++K + E+ +      P + E  I  L Y++ V+KET RL+PV PL +P       +I G+ V +G++V++N+WA+ R    WD+   F PERF     D KG  FE +PFG GRR CPG    + +L +++  L+  FDW L
Sbjct:  349 EVMAKVQAEVRRVFDNKSPQDHEGLIDNLRYMKMVIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDWSL 493          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.267e-24
Identity = 57/144 (39.58%), Postives = 83/144 (57.64%), Query Frame = -1
Query:  166 SKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFL-PRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL----GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDW 582
            SK + EL+  +G+ + + E D+  + YL AV+KE  RLHP  PL    R +  D  I G+ V  G+  +VN WAI RD   W +PL FMPERF+     ++  + G +  L PFG+GRR CPG  L    ++  + SL++ F+W
Sbjct:  347 SKVQEELDAVVGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEW 490          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.287e-24
Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = -1
Query:   88 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKFGITLQKAQPLRAV 585
            L + R E++  +G  + ++E D+ +LPYLQ+V+KE  RLHP  PL + R      E+ GF + + + ++VNA+A+ RD +TW++P  F PERFL    + + R  + I FG+GRR CPG  LA   +   +G+++  FD  +           G+ L  A PL  +
Sbjct:  331 LKRLREEIDSVVGETRLIQEKDLPKLPYLQSVVKEGLRLHPPLPLMV-RTFQRSCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFLRQ--EEERRALKHIAFGSGRRGCPGSNLATIFIGTAIGTMVQCFDLSIKGDKVKMDEVGGLNLTMAHPLECI 493          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 8.212e-24
Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = -1
Query:  163 ELEQTIGR-GKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSD--LDVKG-RNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWK 567
            E++  +G   K +EE D+ ++PYL+AV+ E  R HP     LP   + D  + G+ V K   +      IGRD   W+ P+ F PERF+G +  +D+ G R  +++PFGAGRRICPG+ LA+  L   + +++  F WK
Sbjct:  335 EIKSVVGEEAKEVEEEDVEKMPYLKAVVLEGLRRHPPGHFLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWK 473          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP17A_ICTPU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.829e-23
Identity = 57/139 (41.01%), Postives = 84/139 (60.43%), Query Frame = -1
Query:  172 KARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL---GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSF 579
            K + EL+  IGR +  + +D   LPYL+A ++E  R+ PV+PL +P  A +D  I  +TVQKG++V+VN W++  DE  W NP +F PERFL   G+ L     ++  +PFGAG R+C G  LA   L + L  ++  F
Sbjct:  330 KIQEELDAKIGRDRHPQVNDRGNLPYLEATIREVLRIRPVSPLLIPHVALSDANIGEYTVQKGTRVIVNLWSLHHDEKEWKNPELFNPERFLNEEGNSLCCPSLSY--LPFGAGVRVCLGEALAKLELFLFLSWILQRF 466          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP17A_ORYLA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzias latipes GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.389e-23
Identity = 55/143 (38.46%), Postives = 86/143 (60.14%), Query Frame = -1
Query:  172 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL---GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSF 591
            E   + + EL++ +G  +P + SD   LP+L+A ++E  R+ PVAPL +P  A +D  +  FTV+KG++V++N W++  DE  W NP +F P RFL   GS L +   ++  +PFGAG R+C G  LA   L + L  ++  F
Sbjct:  332 EVQKQIQEELDRKVGVDRPPQLSDRGSLPFLEATIREVLRIRPVAPLLIPHVALSDTSLGDFTVRKGTRVVINLWSLHHDEKEWTNPDLFNPGRFLSADGSSLTLPSSSY--LPFGAGLRVCLGEALAKMELFLFLSWILQRF 472          
The following BLAST results are available for this feature:
BLAST of CX296888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
THAD_ARATH3.334e-2535.09Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C79B3_ARATH3.334e-2538.36Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C79B1_SINAL4.354e-2538.36Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
C79A1_SORBI4.354e-2540.00Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C99A2_ORYSJ5.687e-2537.93Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C78A3_SOYBN1.267e-2439.58Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C75AK_ARATH6.287e-2435.54Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C89A2_ARATH8.212e-2438.13Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
CP17A_ICTPU1.829e-2341.01Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalu... [more]
CP17A_ORYLA2.389e-2338.46Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzia... [more]

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Properties
Property NameValue
Genbank descriptionC05803H09SK FerrChloL1 Citrus clementina cDNA clone C05803H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296888 ID=CX296888; Name=CX296888; organism=Citrus clementina; type=EST; length=591bp
AAATTAATTAACCAATGATAAAGTGCTTTATTGGCTATAAACTATATATA
CATATACATATATGATGTGGGGCTAAATGGCCATAGGGACAGCACGAAGG
GGTTGAGCCTTCTGTAAGGTTATACCAAATTTCTCTTCCATGTCCATCTT
CTCATCTTCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCTAACATTA
TATGTAACATTCTGATTGCCAATGGCAAACCAGGACAAATGCGTCGCCCA
GCTCCAAAGGGGATTAGCTCAAAATTGCGGCCTTTGACATCAAGATCTGA
TCCCAAGAACCTTTCGGGCATGAAAATGAGAGGGTTGTCCCATGTGCTTT
CATCTCTGCCAATAGCCCACGCATTGACTAAAACTTTTGAACCTTTTTGC
ACTGTGAAGCCAGCGATCTCTACGTCTGTTGAGGCTTTACGGGGGAGAAA
TAAGGGAGCTACTGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCTTGTA
GATAAGGTAATCGAGTGATGTCTGATTCCTCAAGTGGTTTGCCCCTGCCA
ATTGTTTGTTCCAGCTCCAATCTTGCTTTTGATAAAGCCTC
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