CX296888

Overview
NameCX296888
Unique NameCX296888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length591
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP1A1_PLEPL (Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 38/131 (29.01%), Postives = 64/131 (48.85%), Query Frame = -1
Query:  181 ELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGR--NFELIPFGAGRRICPGLPLAIRMLHIMLGSLI 567
            E+E  +G  +    SD   LP+L+A + E  R     P  +P   + D  + G+ + K + V +N W I  D   W +P  F P+RFL +D     +    +++ FG G+R C G  +A   +++ L  +I
Sbjct:  351 EIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIII 481          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP1A1_PLAFE (Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 38/131 (29.01%), Postives = 64/131 (48.85%), Query Frame = -1
Query:  181 ELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGR--NFELIPFGAGRRICPGLPLAIRMLHIMLGSLI 567
            E+E  +G  +    SD   LP+L+A + E  R     P  +P   + D  + G+ + K + V +N W I  D   W +P  F P+RFL +D     +    +++ FG G+R C G  +A   +++ L  +I
Sbjct:  351 EIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIII 481          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C97B1_PEA (Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 45/154 (29.22%), Postives = 74/154 (48.05%), Query Frame = -1
Query:  214 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDV-------EIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL--GSDLDVKG-------------------RNFELIPFGAGRRICPGLPLAI 591
            + + KA+ E++  +G GKP  E  + +L Y++ ++ ET RL+P  PL + R    DV       +  G+T+  G+ V ++ + + R    WD P  F PERFL   ++ +V+G                    +F  +PFG G R C G   A+
Sbjct:  383 DKMKKAQAEVDLVLGMGKPTFEL-LKKLEYIRLIVVETLRLYPQPPLLIRRSLKPDVLPGGHKGDKDGYTIPAGTDVFISVYNLHRSPYFWDRPNDFEPERFLVQNNNEEVEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFAL 535          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C521A_DICDI (Probable cytochrome P450 521A1 OS=Dictyostelium discoideum GN=cyp521a1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 40/126 (31.75%), Postives = 64/126 (50.79%), Query Frame = -1
Query:  172 DITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAW-AIGRDESTWDNPLIFMPERFLGSDLDVKGRNFE--------LIPFGAGRRICPGLPLAIRMLHIMLGSLINSF 522
            DI +LPY+  ++KE  R+HP  PL +PR A  D+ I G+ + KG  V  N + A+       D P    PER++ ++   K    +         +PF +G R CPG+  A   L ++  ++I +F
Sbjct:  334 DIDKLPYIDGIIKEISRIHPAGPLSVPRTAINDIMINGYFIPKGCHVFQNTYGAVYNYMKESDEPCKMKPERWIENEKLRKDGKLDPTNDLALISLPFSSGIRNCPGVGFAEYELFLLFSNIILNF 459          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C5144_DICDI (Probable cytochrome P450 514A4 OS=Dictyostelium discoideum GN=cyp514a4 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 36/100 (36.00%), Postives = 56/100 (56.00%), Query Frame = -1
Query:  229 SDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTW-DNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPG 525
            +D T+ PY+ +V+ E++R +   P+  P K + DVE+ G+ + KG+ ++ N       +  W ++ L F PERF    L+ KG    L  FGAG R CPG
Sbjct:  355 ADHTKYPYIISVMNESYRYNSSVPITEPNKTTEDVEVNGYKIAKGTMIIKNLRGTHLSKEFWGEDALEFKPERFKNQPLNQKG----LFHFGAGARACPG 450          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C49A1_DROME (Probable cytochrome P450 49a1 OS=Drosophila melanogaster GN=Cyp49a1 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 44/135 (32.59%), Postives = 65/135 (48.15%), Query Frame = -1
Query:  172 PLEESDITR-----LPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKG--------RNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSF 537
            P  E+DI +     +PYL+A +KET R+ PV  +   R   +D  I G+ V KG+ V+     +  D + +  P  F+PER+L    D  G          F  +PFG GRR+C G   A   LH +L  +   +
Sbjct:  424 PHREADINQNVLEQMPYLRACVKETLRMRPVV-IANGRSLQSDAVINGYHVPKGTHVIFPHLVVSNDPAYFPEPKRFLPERWLKQSTDAAGCPHANQKIHPFVSLPFGFGRRMCVGRRFAEIELHTLLAKIFRKY 557          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP1A3_ONCMY (Cytochrome P450 1A3 OS=Oncorhynchus mykiss GN=cyp1a3 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11
Identity = 40/140 (28.57%), Postives = 67/140 (47.86%), Query Frame = -1
Query:  181 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL---GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLI 591
            E   +   EL++ +G  +    SD   LP L+A + E FR     P  +P     D  + G+ + K + V +N W +  D   W  P  F P+RFL   G++L+ K    +++ FG G+R C G  +    +++ L  L+
Sbjct:  343 ETQERLHQELKEKVGMIRTPRLSDKINLPLLEAFILEIFRHSSFLPFTIPHCTIKDTSLNGYFIPKDTCVFINQWQVNHDPELWKEPSSFNPDRFLSADGTELN-KLEGEKVLVFGMGKRRCIGEAIGRNEVYLFLAILL 481          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP1A1_ORYLA (Cytochrome P450 1A1 OS=Oryzias latipes GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11
Identity = 39/131 (29.77%), Postives = 62/131 (47.33%), Query Frame = -1
Query:  181 ELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGR--NFELIPFGAGRRICPGLPLAIRMLHIMLGSLI 567
            E+++ IG  +    SD + LP   A + E FR     P  +P   + D  + G+ + K + V +N W I  D   W +P  F P+RFL  D     R    +++ FG G+R C G  +A   + + L  +I
Sbjct:  351 EIKENIGLNRNPTISDRSNLPLTDAFILEIFRHSSFLPFTIPHCTTRDTSLNGYYIPKDTCVFINQWQINHDPKLWQDPSSFNPDRFLSEDGSEVNRLDGEKVMVFGLGKRRCIGEVIARNEVFLFLAIMI 481          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP1A1_OPSTA (Cytochrome P450 1A1 OS=Opsanus tau GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11
Identity = 39/138 (28.26%), Postives = 66/138 (47.83%), Query Frame = -1
Query:  160 ELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGR--NFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 567
            E++ ++G  +    SD   LP+L A + E FR     P  +P   + +  + G+ + K + V +N W I  D   W +P  F PERFL +D     R    +++ FG G+R C G  +A   + + L  +I    + +
Sbjct:  351 EIKDSVGTERMPLLSDRPSLPFLDAFILEIFRHSSFLPFTIPHCTTKNTSLNGYFIPKDTCVFINQWQINHDPELWKDPFSFNPERFLSADGTELNRLEGEKVMLFGLGKRRCIGEVIARNEVFLFLAIIIQRLQFHM 488          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP1A1_MICTO (Cytochrome P450 1A1 OS=Microgadus tomcod GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11
Identity = 40/139 (28.78%), Postives = 65/139 (46.76%), Query Frame = -1
Query:  181 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDV--KGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLI 591
            E   +   E++  +G  +    +D   LP L+A + E FR     P  +P  A+ D  + G+ + K + V +N W I  D   W  P  F P+RFL +D     K    +++ FG G+R C G  +A   + + L  L+
Sbjct:  339 EIQERLHQEIKDKVGLSRSPVLTDRHNLPILEAFIFEIFRHSSFLPFTIPHCATKDTSLDGYFIPKDTCVFINQWQINHDPELWKEPSTFNPDRFLSADASELNKLAGEKVMLFGMGKRRCIGEMVARNEVFLFLAILV 477          
The following BLAST results are available for this feature:
BLAST of CX296888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
CP1A1_PLEPL1.606e-1129.01Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cy... [more]
CP1A1_PLAFE1.606e-1129.01Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a... [more]
C97B1_PEA1.606e-1129.22Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 P... [more]
C521A_DICDI1.606e-1131.75Probable cytochrome P450 521A1 OS=Dictyostelium di... [more]
C5144_DICDI1.606e-1136.00Probable cytochrome P450 514A4 OS=Dictyostelium di... [more]
C49A1_DROME1.606e-1132.59Probable cytochrome P450 49a1 OS=Drosophila melano... [more]
CP1A3_ONCMY2.098e-1128.57Cytochrome P450 1A3 OS=Oncorhynchus mykiss GN=cyp1... [more]
CP1A1_ORYLA2.098e-1129.77Cytochrome P450 1A1 OS=Oryzias latipes GN=cyp1a1 P... [more]
CP1A1_OPSTA2.098e-1128.26Cytochrome P450 1A1 OS=Opsanus tau GN=cyp1a1 PE=2 ... [more]
CP1A1_MICTO2.098e-1128.78Cytochrome P450 1A1 OS=Microgadus tomcod GN=cyp1a1... [more]

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Properties
Property NameValue
Genbank descriptionC05803H09SK FerrChloL1 Citrus clementina cDNA clone C05803H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296888 ID=CX296888; Name=CX296888; organism=Citrus clementina; type=EST; length=591bp
AAATTAATTAACCAATGATAAAGTGCTTTATTGGCTATAAACTATATATA
CATATACATATATGATGTGGGGCTAAATGGCCATAGGGACAGCACGAAGG
GGTTGAGCCTTCTGTAAGGTTATACCAAATTTCTCTTCCATGTCCATCTT
CTCATCTTCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCTAACATTA
TATGTAACATTCTGATTGCCAATGGCAAACCAGGACAAATGCGTCGCCCA
GCTCCAAAGGGGATTAGCTCAAAATTGCGGCCTTTGACATCAAGATCTGA
TCCCAAGAACCTTTCGGGCATGAAAATGAGAGGGTTGTCCCATGTGCTTT
CATCTCTGCCAATAGCCCACGCATTGACTAAAACTTTTGAACCTTTTTGC
ACTGTGAAGCCAGCGATCTCTACGTCTGTTGAGGCTTTACGGGGGAGAAA
TAAGGGAGCTACTGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCTTGTA
GATAAGGTAATCGAGTGATGTCTGATTCCTCAAGTGGTTTGCCCCTGCCA
ATTGTTTGTTCCAGCTCCAATCTTGCTTTTGATAAAGCCTC
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