CX296888

Overview
NameCX296888
Unique NameCX296888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length591
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.303e-34
Identity = 74/173 (42.77%), Postives = 109/173 (63.01%), Query Frame = -1
Query:   82 LSKARLELEQTIG---RGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKFG--ITLQKAQPLRAVPM 585
            + KA+ E+   IG    G+ +EE D+ +L YL+ V+KET RLHP APL LPR+   D++I G+ + +   +LVNAW+IGRD  +W NP  F PERF+   +D KG +FEL+PFG+GRRICPG+ +AI  + + L +L+  FDW +         +    +T+ K  PL  +P+
Sbjct:  328 MKKAQDEIRTCIGIKQEGRIMEE-DLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKDMDMEEAGDLTVDKKVPLELLPV 499          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.008e-34
Identity = 71/172 (41.28%), Postives = 107/172 (62.21%), Query Frame = -1
Query:   82 LSKARLELEQTIG--RGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKFG--ITLQKAQPLRAVPM 585
            + K + E+   IG  + + +EE D+ +L YL+ V+KET RLHP APL LPR+  + ++I G+ +   + +LVN W+IGRD   W NP  F PERF+   +D KG +FE++PFG+GRRICPG+  AI  + + L +L+  FDW+L         +    +T+ K  PL+ VP+
Sbjct:  324 MKKVQDEIRTCIGIKQNEKIEEDDVDKLQYLKLVVKETLRLHPAAPLLLPRETMSQIKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLPEEDKDLDMEEAGDVTIIKKVPLKLVPV 495          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34
Identity = 74/174 (42.53%), Postives = 101/174 (58.05%), Query Frame = -1
Query:   85 EALSKARLELEQTIGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKF----GITLQKAQPLRAVP 591
            + L KA+ E+   +G  KP +   D  ++PYL+ V+KET RLHP A L +PR+   D  I G+ V   ++V VNAWAIGRD ++W  P  F P+RF+GSD+D  G +FELIPFGAGRRICPGL +    +   L +L+  +DW L                +T  +  PL  VP
Sbjct:  349 QVLRKAQAEVRAAVGDDKPRVNSEDAAKIPYLKMVVKETLRLHPPATLLVPRETMRDTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEFNPDRFVGSDVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPEDVSMEETGALTFHRKTPLVVVP 522          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34
Identity = 69/168 (41.07%), Postives = 101/168 (60.12%), Query Frame = -1
Query:   82 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKFGITLQKAQPLRAVPM 585
            + KA+ E+ +       ++E+ + +L YLQAV+KET RLHP  PL LPR+     +I G+T+   S+V+VNAWAIGRD + W  P  F P+RFL S +D KG +FE +PFG GRRICPG+  A+  + + L  L+  FDW+            G+T+++   L   P+
Sbjct:  320 MKKAQEEVRKVFNEEGNVDETKLHQLKYLQAVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQSNTEKLNMKESRGVTVRREDDLYLTPV 487          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.702e-34
Identity = 72/177 (40.68%), Postives = 108/177 (61.02%), Query Frame = -1
Query:   85 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL----GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL------XXXXXXXXXKFGITLQKAQPLRAVP 585
            L+K + E+      G+ + E D++R+PYL+A +KE+ R+HP AP  LP  ++ D EI G+T+  G++V+VNAWA+ RD + WD    F PERFL     +++D+ G++   +PFGAGRRIC G   AI  + IML +LI  FDW++               +FG+TL++ Q L  VP
Sbjct:  350 LAKLQKEVRTATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLVP 526          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 6.702e-34
Identity = 71/172 (41.28%), Postives = 108/172 (62.79%), Query Frame = -1
Query:   82 LSKARLELEQTIG--RGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKFG--ITLQKAQPLRAVPM 585
            + KA+ E+   IG  + + +EE D+ +L YL+ V+KET RLHP APL LPR+   D++I G+ + + + +LVNAW+IGR+   W+NP  F PERF+   +D KG +FE++PFG+GR+ICPG+   I  + + L +L+  FDW+L         +     T+ K  PL  VP+
Sbjct:  327 MKKAQEEIRTCIGIKQKERIEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLAEEDKDIDMEEAGDATIVKKVPLELVPI 498          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 8.753e-34
Identity = 66/141 (46.81%), Postives = 99/141 (70.21%), Query Frame = -1
Query:  169 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGS--DLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFD 585
            L K + EL   IG+ + + ESDI +L YL A++KET RL+P AP   PR+ + D  I G+ ++KG++++ N W I RD S W +PL F PERFL +  D+DV+G+NFEL+PFG+GRR+C G+ L + M+H +L + ++SF+
Sbjct:  363 LEKLKEELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFE 503          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.753e-34
Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = -1
Query:   85 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKF----GITLQKAQPLRAVP 585
            + K + E+   I   + +   D  +L YL+ V+KET+RLHP  PL +PR+A ++ EI G+T+   +++ VN WAIGRD  TW +P +F+PERF  +++D KG++FEL+PFG GRR+CP + +   M+   L +L+  FDWKL               G+T+ K   L  VP
Sbjct:  324 MKKVQSEIRSQIKNKERISFDDTDKLEYLKMVIKETWRLHPTTPLLIPREAMSEFEINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFTDNNIDAKGQHFELLPFGGGRRMCPAVYMGTTMVEFGLANLLYHFDWKLPEGMKVDDIDMEEAPGLTVNKKNELILVP 494          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.753e-34
Identity = 71/172 (41.28%), Postives = 105/172 (61.05%), Query Frame = -1
Query:   85 LSKARLELEQTIGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKF----GITLQKAQPLRAVP 585
            + K + E+  T+G  K  + E D+ ++ YL  V+KE+FRLHP APL LPR+  +D+EI G+ + K + V +N +AIGRD   W NP  F PERFL + ++ KG+++EL+PFGAGRR CPG+ L I +L + L +++  FDW L                + + K  PL+ VP
Sbjct:  324 MKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVP 495          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.753e-34
Identity = 71/171 (41.52%), Postives = 105/171 (61.40%), Query Frame = -1
Query:   82 LSKARLELEQTIGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKFG--ITLQKAQPLRAVPM 585
            + K + E+   IG  K  +EE D+ +L YL+ V+KET RLHP APL LPR+   D++I G+ + + + +LV+AW++GRD   W NP  F PERF+   +D KG +FE +PFG+GRR CPG+  AI  + + L +L+  FDWKL         +    +T+ K  PL  +P+
Sbjct:  328 MKKVQDEIRSCIGIKKERIEEEDVGKLQYLKLVIKETLRLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEMKDMNMEESGDVTIVKKVPLELLPV 498          
The following BLAST results are available for this feature:
BLAST of CX296888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
C71B4_ARATH2.303e-3442.77Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BO_ARATH3.008e-3441.28Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71E1_SORBI3.929e-3442.534-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71DC_CATRO3.929e-3441.07Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71C1_MAIZE6.702e-3440.68Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71B3_ARATH6.702e-3441.28Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C82A1_PEA8.753e-3446.81Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C71BV_ARATH8.753e-3439.77Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71BU_ARATH8.753e-3441.28Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71BP_ARATH8.753e-3441.52Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05803H09SK FerrChloL1 Citrus clementina cDNA clone C05803H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296888 ID=CX296888; Name=CX296888; organism=Citrus clementina; type=EST; length=591bp
AAATTAATTAACCAATGATAAAGTGCTTTATTGGCTATAAACTATATATA
CATATACATATATGATGTGGGGCTAAATGGCCATAGGGACAGCACGAAGG
GGTTGAGCCTTCTGTAAGGTTATACCAAATTTCTCTTCCATGTCCATCTT
CTCATCTTCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCTAACATTA
TATGTAACATTCTGATTGCCAATGGCAAACCAGGACAAATGCGTCGCCCA
GCTCCAAAGGGGATTAGCTCAAAATTGCGGCCTTTGACATCAAGATCTGA
TCCCAAGAACCTTTCGGGCATGAAAATGAGAGGGTTGTCCCATGTGCTTT
CATCTCTGCCAATAGCCCACGCATTGACTAAAACTTTTGAACCTTTTTGC
ACTGTGAAGCCAGCGATCTCTACGTCTGTTGAGGCTTTACGGGGGAGAAA
TAAGGGAGCTACTGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCTTGTA
GATAAGGTAATCGAGTGATGTCTGATTCCTCAAGTGGTTTGCCCCTGCCA
ATTGTTTGTTCCAGCTCCAATCTTGCTTTTGATAAAGCCTC
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