CX296888

Overview
NameCX296888
Unique NameCX296888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length591
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C13A4_CAEEL (Putative cytochrome P450 CYP13A4 OS=Caenorhabditis elegans GN=cyp-13A4 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.674e-11
Identity = 41/137 (29.93%), Postives = 71/137 (51.82%), Query Frame = -1
Query:  172 ELEQTIGRGKPLEE---SDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTW-DNPLIFMPERF-LGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSF 567
            +L++ + R  P  E     I++L Y++ V+KE  R++P+A L   RK      + G  + +G+ V V+ W +  D   W D+   F PER+  G +L      +  +PFG G RIC G+ LA+    ++L  ++  +
Sbjct:  351 KLQEEVDRECPDPEVTFDQISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLGVEIDEGTNVQVDTWTLHYDPKVWGDDASEFKPERWETGDELFYAKGGY--LPFGMGPRICIGMRLAMMEEKLLLTHILKKY 485          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP6D5_DROME (Probable cytochrome P450 6d5 OS=Drosophila melanogaster GN=Cyp6d5 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 48/175 (27.43%), Postives = 87/175 (49.71%), Query Frame = -1
Query:   76 EALSKARLELEQTIGR-GKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEI--AGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKFGITLQKAQPLRAVPMAI 591
            E + KA+ ++   I + G  L    I+ + YL+A + ET R +P  PL L R  + D  +  +   +QKG+ ++++   + RDE  + +PL + PER+L +  D     +  +PFG G R+C G  +    + I +  ++++FD  L         +FG+      P   VP+ +
Sbjct:  335 EVMEKAKEDVRSAIEKHGGKLTYDAISDMKYLEACILETARKYPALPL-LNRICTKDYPVPDSKLVIQKGTPIIISLIGMHRDEEYFPDPLAYKPERYLENGKDYTQAAY--LPFGEGPRMCIGARMGKVNVKIAIAKVLSNFD--LEIRKEKCEIEFGVYGIPLMPKSGVPVRL 504          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP4P3_DROME (Probable cytochrome P450 4p3 OS=Drosophila melanogaster GN=Cyp4p3 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 39/122 (31.97%), Postives = 67/122 (54.92%), Query Frame = -1
Query:  172 LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIA-GFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSF 534
            L    + +L  L+  +KET RL P  P  + R+ + + E++ G  + KGS++ V+ + I R+   WD+P  F PERFL  +   +   +  IPF AG+R C G   A++ +  ++ +L+  F
Sbjct:  363 LNIGQLNKLKNLEYFIKETMRLFPSVPA-MGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYWDSPEEFRPERFLPENSQNR-HTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQF 482          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP4G1_DROME (Cytochrome P450 4g1 OS=Drosophila melanogaster GN=Cyp4g1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 38/120 (31.67%), Postives = 65/120 (54.17%), Query Frame = -1
Query:  172 SDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAG--FTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSF 525
            +D   + YL+ V+ ET RL+P  PL + R+   D+++A   +TV KG+ V+V  + + R    + NP  F P+ FL   +      +  IPF AG R C G   A+  L ++L +++ ++
Sbjct:  401 ADTMEMKYLERVILETLRLYPPVPL-IARRLDYDLKLASGPYTVPKGTTVIVLQYCVHRRPDIYPNPTKFDPDNFLPERM-ANRHYYSFIPFSAGPRSCVGRKYAMLKLKVLLSTIVRNY 518          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP4CU_BLAGE (Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 38/121 (31.40%), Postives = 65/121 (53.72%), Query Frame = -1
Query:  163 SDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWK 525
            +D+  + YL+ V+KE+ RLHP + ++  R+A  D E+ G+T+  G+ +  +   I R+   + NP  F P+ FL  D  V    +  IPF AG R C G   A+    ++L  L+  + ++
Sbjct:  353 ADLNNMNYLERVIKESLRLHP-SVIYFVREAHQDFELGGYTIPAGTNIDFSVPFIHRNPEIFPNPRCFNPDNFL-PDRVVNRHPYAYIPFSAGPRNCIGQRFALLEEKVVLSYLLRHYRFR 471          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: CP2BF_RAT (Cytochrome P450 2B15 OS=Rattus norvegicus GN=Cyp2b15 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 40/136 (29.41%), Postives = 69/136 (50.74%), Query Frame = -1
Query:  172 KARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSF 579
            K + E++Q IG  +     D T++PY  AV+ E  R   + P+ LP + + D    G+ + K ++V     +   D   +D+P  F PE FL  +  +K ++   +PF  G+RIC G  +A   L I   +++ +F
Sbjct:  324 KVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLK-KSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNF 458          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C5083_DICDI (Probable cytochrome P450 508A3 OS=Dictyostelium discoideum GN=cyp508a3-1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 45/162 (27.78%), Postives = 78/162 (48.15%), Query Frame = -1
Query:  112 EALSKARLELEQTI-GRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDW-KLXXXXXXXXXKFGITLQ 591
            E   K   E++ T+ GR K L  SD    PY  + +KET R  P + + +PR  S D+ I    + K +++ +N + + R++  ++NP  F P RF+  D      N   +PF  G R C G   A+  + +   ++I +F +  +          +G+TL+
Sbjct:  311 EIQEKVYDEIKLTVNGRNKVLL-SDRQFTPYTVSFIKETLRYKPPSSVGVPRTTSQDIIIGDKFIPKDAQIFINYYGLSRNQDYFENPEQFEPSRFMNPD-----TNIAFLPFSIGTRNCVGQNFALDEMFLAFSNIILNFKFSSIDGKQIDETELYGVTLR 466          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C27C1_HUMAN (Cytochrome P450 27C1 OS=Homo sapiens GN=CYP27C1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = -1
Query:  163 ELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGS-DLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWK 567
            E+ + +G       +D+ ++P ++A+LKET RL PV P    R    D+ I G+ + KG+++ +  +A    +  +     F PER+L   DLD +  NF  IPFG G R C G  +A   +H+++  L+  F+ K
Sbjct:  209 EIVKNLGERHVPTAADVPKVPLVRALLKETLRLFPVLP-GNGRVTQEDLVIGGYLIPKGTQLALCHYATSYQDENFPRAKEFRPERWLRKGDLD-RVDNFGSIPFGHGVRSCIGRRIAELEIHLVVIQLLQHFEIK 342          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 42/142 (29.58%), Postives = 70/142 (49.30%), Query Frame = -1
Query:  169 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTW-DNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFD 591
            E +  A+ E++  +G  + +   D+T+L YL AV++E+ RL+PVA     R+      +    + KG K+  +  ++ R +  W +N   F+PER+L             IPFGAG R C G+ L +      L  L+  +D
Sbjct:  341 EKMKLAQEEVDTVVG-SENVSYDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLEPS---SRHTMSWIPFGAGPRQCVGMRLGLSEAKTALAHLLRRYD 478          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C11B2_MOUSE (Cytochrome P450 11B2, mitochondrial OS=Mus musculus GN=Cyp11b2 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 47/140 (33.57%), Postives = 77/140 (55.00%), Query Frame = -1
Query:  172 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSF 591
            +AL +  L  E +I        SD   LP L+A LKET RL+PV   FL R  S+D+ +  + V  G+ VL+  +++GR+ + +  P  +MP+R+L      + R+F+ + FG G R C G  LA   + ++L  ++ +F
Sbjct:  338 KALRQESLAAEASIAANPQKAMSD---LPLLKAALKETLRLYPVGG-FLGRILSSDLVLQNYHVPAGTLVLLYLYSMGRNPAVFPRPERYMPQRWL-----ERKRSFQHLAFGFGVRQCLGRRLAEVEMMLLLHHILKTF 468          
The following BLAST results are available for this feature:
BLAST of CX296888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
C13A4_CAEEL4.674e-1129.93Putative cytochrome P450 CYP13A4 OS=Caenorhabditis... [more]
CP6D5_DROME6.104e-1127.43Probable cytochrome P450 6d5 OS=Drosophila melanog... [more]
CP4P3_DROME6.104e-1131.97Probable cytochrome P450 4p3 OS=Drosophila melanog... [more]
CP4G1_DROME6.104e-1131.67Cytochrome P450 4g1 OS=Drosophila melanogaster GN=... [more]
CP4CU_BLAGE6.104e-1131.40Cytochrome P450 4c21 OS=Blattella germanica GN=CYP... [more]
CP2BF_RAT6.104e-1129.41Cytochrome P450 2B15 OS=Rattus norvegicus GN=Cyp2b... [more]
C5083_DICDI6.104e-1127.78Probable cytochrome P450 508A3 OS=Dictyostelium di... [more]
C27C1_HUMAN6.104e-1132.35Cytochrome P450 27C1 OS=Homo sapiens GN=CYP27C1 PE... [more]
C13B1_CAEEL6.104e-1129.58Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
C11B2_MOUSE6.104e-1133.57Cytochrome P450 11B2, mitochondrial OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionC05803H09SK FerrChloL1 Citrus clementina cDNA clone C05803H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296888 ID=CX296888; Name=CX296888; organism=Citrus clementina; type=EST; length=591bp
AAATTAATTAACCAATGATAAAGTGCTTTATTGGCTATAAACTATATATA
CATATACATATATGATGTGGGGCTAAATGGCCATAGGGACAGCACGAAGG
GGTTGAGCCTTCTGTAAGGTTATACCAAATTTCTCTTCCATGTCCATCTT
CTCATCTTCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCTAACATTA
TATGTAACATTCTGATTGCCAATGGCAAACCAGGACAAATGCGTCGCCCA
GCTCCAAAGGGGATTAGCTCAAAATTGCGGCCTTTGACATCAAGATCTGA
TCCCAAGAACCTTTCGGGCATGAAAATGAGAGGGTTGTCCCATGTGCTTT
CATCTCTGCCAATAGCCCACGCATTGACTAAAACTTTTGAACCTTTTTGC
ACTGTGAAGCCAGCGATCTCTACGTCTGTTGAGGCTTTACGGGGGAGAAA
TAAGGGAGCTACTGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCTTGTA
GATAAGGTAATCGAGTGATGTCTGATTCCTCAAGTGGTTTGCCCCTGCCA
ATTGTTTGTTCCAGCTCCAATCTTGCTTTTGATAAAGCCTC
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