CX296888

Overview
NameCX296888
Unique NameCX296888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length591
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 1.651e-32
Identity = 61/142 (42.96%), Postives = 94/142 (66.20%), Query Frame = -1
Query:  160 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 585
            + K + E+   +     +   DI  LPYL+ V+KET+RLHP  PL LPR+  ++ EI G+ +Q  + + VN WAIGRD  +W +  +F PERF+ +++D KG+NFEL+PFG+GRRICPG+ +   M+   L +++  FDW++
Sbjct:  324 MKKVQSEIRNQMINKSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEV 465          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.156e-32
Identity = 61/143 (42.66%), Postives = 100/143 (69.93%), Query Frame = -1
Query:  160 LSKARLELEQTIGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 585
            + K + E+ + +G  K  + E D+ ++ YL+ V++ETFRLHP APL LPR+  +D++I G+ + K + + +N ++IGRD + W+NP  F PERF+ S ++ KG+++EL+PFGAGRRICPG+   I ++ + L +++  FDW L
Sbjct:  324 MKKLQQEIREILGDNKEKITEQDLEKVHYLKLVIEETFRLHPPAPLLLPRETMSDLKIQGYNIPKNTMIEINTYSIGRDPNCWENPNDFNPERFIDSPVEYKGQHYELLPFGAGRRICPGMATGITIVELGLLNVLYFFDWSL 466          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.156e-32
Identity = 65/172 (37.79%), Postives = 104/172 (60.47%), Query Frame = -1
Query:   82 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVPM 585
            + K + E+ + I     + + D+ +L Y + VLKETFR+ P+ P+ +PR A+ D++IAG+ V + + + VN WA+    S W +P  F PERF+ +  D KG NFEL+PFG+GRR+CPG+ + + ++H+ L +L+  FDWKL              +G+   K  PL A+P+
Sbjct:  320 MKKLQAEIREKIKNIDEITDDDVEQLDYFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPLEAIPV 491          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.816e-32
Identity = 71/169 (42.01%), Postives = 106/169 (62.72%), Query Frame = -1
Query:   88 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDW-KLXXXXXXXXXKFGITLQKAQPLRAV 591
            + +SKAR E++  +G  + +EE+D++ LPYL+ ++ ET RLHP  PL +P  AS D +I  + + +G+ +LVNAWAI RD +TWD+P  F PERF     + +    +L+ FG GRR CPG  LA R++ + LGSLI  F+W ++           G T+ KA PL+A+
Sbjct:  327 DVISKARDEIDNRVGLDRLIEEADLSELPYLKNIVLETLRLHPATPLLVPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERF-----EKEEEAQKLLAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVGNVEVDMKEGVGNTVPKAIPLKAI 490          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 3.677e-32
Identity = 65/173 (37.57%), Postives = 105/173 (60.69%), Query Frame = -1
Query:   82 LSKARLELEQTIGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKF----GITLQKAQPLRAVPM 585
            + KA+  +  T+G  K  + E D+ ++ YL  +LKETFRLHP  P  +PR+  + ++I G+ +   +++ +N W IGRD   W++P  F PERF  S +D +G++F+L+PFG+GRRICPG+P+AI  + + L +L+  FDW +                I++ K  PL+ VP+
Sbjct:  327 MKKAQESIRTTLGLKKERITEEDLGKVEYLNHILKETFRLHPALPFVVPRETMSHIKIQGYDIPPKTQIQLNVWTIGRDPKRWNDPEEFNPERFANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMPDGTKGEDIDMEEAGNISIVKKIPLQLVPV 499          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.273e-32
Identity = 62/145 (42.76%), Postives = 96/145 (66.21%), Query Frame = -1
Query:  160 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTW-DNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            E L++ + E+         + E DI  + YL+AV+KET RLHP  PL +P +++ DV +  + +  G++V++NAWAIGR+ +TW  +   F PER L S +D +G NFELIPFGAGRRICP +  A+ ++ + L +L++ +DW+L
Sbjct:  313 ECLNRLQEEVRTICKGNSSVSEDDIKDMNYLKAVIKETMRLHPPLPLMVPHESTQDVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRL 457          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.193e-32
Identity = 67/147 (45.58%), Postives = 95/147 (64.63%), Query Frame = -1
Query:  160 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTW-DNPLIFMPERFLG--SDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            EA+ KA+ E+   IG    + E DI  LPYL+AV+KE+ RL PV P+ L R+   D +I G+ +   + + VNAWA+ RD + W DNP  F+PERF+     +D KG++FEL+PFG+GRR+CP + L I M+ I   +L+  FDW L
Sbjct:  320 EAMKKAQDEVRSVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSL 466          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.070e-31
Identity = 72/176 (40.91%), Postives = 106/176 (60.23%), Query Frame = -1
Query:   85 EALSKARLELEQTIG-RGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTW-DNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKF----GITLQKAQPLRAVP 591
            + L KA+ E+ + +  +G   + E D+  LPY +A++KET R+ PV PL +PR    D +IAG+ +  G+ V VNAWA+ RDE  W  NP  F PERFL  ++D KG ++E IPFG+GRR+CPG+ L   ML +   +L+ SF++KL               G+ + K+Q L+ VP
Sbjct:  321 QVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVP 496          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.397e-31
Identity = 66/165 (40.00%), Postives = 104/165 (63.03%), Query Frame = -1
Query:   88 RLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGS--DLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFD-WKLXXXXXXXXXKFGITLQKAQPLRAV 573
            + EL+  +G+ + + ESDI+ L YLQAV+KET RL+   PL  PR+ + D  + G+ V+KG++++ N W I  D + W +P  F P+RFL +  D+DVKG +F+L+PFG+GRR+CPG+   ++ +H+ L S ++SF+              FG+T  KA PL  +
Sbjct:  348 KAELDIQVGKDRCICESDISNLVYLQAVVKETLRLYAPGPLSSPREFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFGVTNTKATPLEVL 512          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.397e-31
Identity = 63/145 (43.45%), Postives = 93/145 (64.14%), Query Frame = -1
Query:  160 EALSKARLELEQTIGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            + + K + E+  T+G  K  + E D+T L Y + V+KE FRLHP  P  LPR+  + V+I G+ +   +++++N +AI RD   W NP  F P+RFL S +D KG NFEL+PFG+GRRICPG+ + I ++   L +L+  FDW L
Sbjct:  321 KVMKKVQEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGL 465          
The following BLAST results are available for this feature:
BLAST of CX296888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
C71B9_ARATH1.651e-3242.96Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71BM_ARATH2.156e-3242.66Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR2.156e-3237.79Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C81D1_ARATH2.816e-3242.01Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C71B2_ARATH3.677e-3237.57Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71AM_ARATH6.273e-3242.76Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH8.193e-3245.58Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C83A1_ARATH1.070e-3140.91Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C82A4_SOYBN1.397e-3140.00Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C71BT_ARATH1.397e-3143.45Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05803H09SK FerrChloL1 Citrus clementina cDNA clone C05803H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296888 ID=CX296888; Name=CX296888; organism=Citrus clementina; type=EST; length=591bp
AAATTAATTAACCAATGATAAAGTGCTTTATTGGCTATAAACTATATATA
CATATACATATATGATGTGGGGCTAAATGGCCATAGGGACAGCACGAAGG
GGTTGAGCCTTCTGTAAGGTTATACCAAATTTCTCTTCCATGTCCATCTT
CTCATCTTCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCTAACATTA
TATGTAACATTCTGATTGCCAATGGCAAACCAGGACAAATGCGTCGCCCA
GCTCCAAAGGGGATTAGCTCAAAATTGCGGCCTTTGACATCAAGATCTGA
TCCCAAGAACCTTTCGGGCATGAAAATGAGAGGGTTGTCCCATGTGCTTT
CATCTCTGCCAATAGCCCACGCATTGACTAAAACTTTTGAACCTTTTTGC
ACTGTGAAGCCAGCGATCTCTACGTCTGTTGAGGCTTTACGGGGGAGAAA
TAAGGGAGCTACTGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCTTGTA
GATAAGGTAATCGAGTGATGTCTGATTCCTCAAGTGGTTTGCCCCTGCCA
ATTGTTTGTTCCAGCTCCAATCTTGCTTTTGATAAAGCCTC
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