CX296888

Overview
NameCX296888
Unique NameCX296888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length591
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.825e-31
Identity = 63/143 (44.06%), Postives = 96/143 (67.13%), Query Frame = -1
Query:  160 LSKARLELEQTIGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 585
            + K + E+  T+G  K  + E D+ +L Y + ++KE FRLHP APL LPR+  + V+I G+ +   +++++NA+AI RD   W NP  F P+RFL S +D +G NFEL+PFG+GRRICPG+ + I ++ + L +L+  FDW L
Sbjct:  323 MKKVQDEIRTTLGDKKERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGL 465          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.384e-31
Identity = 57/142 (40.14%), Postives = 93/142 (65.49%), Query Frame = -1
Query:  160 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 585
            + K + E+   IG+   +   DI +L YL+ V+ ET+RLHP +P  +PR+  ++ E+  + +   +++ VN WAIGRD  TW +P  F+PERF+ S +D KG++FEL+PFG+GRR+CP + +   M+   L +++  FDWK+
Sbjct:  324 MKKVQSEIRNQIGKKSMITLDDIDQLHYLKMVINETWRLHPPSPFLIPRQVMSEFELNDYVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFVNSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKI 465          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.113e-31
Identity = 65/172 (37.79%), Postives = 102/172 (59.30%), Query Frame = -1
Query:   82 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKF----GITLQKAQPLRAVPM 585
            + +A+ E+ +       ++E+++ +L YL++++KET RLHP  PL +PR +    +I G+ +   +++++NAWAIGR+   W     F PERFL S +D +G +FE IPFGAGRRICPG+  AI  + + L  L+  FDWKL               GITL++   L  +P+
Sbjct:  335 MEEAQAEVRRVYDSKGYVDETELHQLIYLKSIIKETMRLHPPVPLLVPRVSRERCQINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRRQNDLCLIPI 506          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.066e-31
Identity = 60/143 (41.96%), Postives = 94/143 (65.73%), Query Frame = -1
Query:  160 LSKARLELEQTIGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 585
            + K + E+   +G  K  + E D+ ++ YL+ V++E FRLHP APL LPR   +D+ I G+++ K + + +N + IGRD   W  P  F+PERF+ + ++ KG++FEL+PFGAGRR+CPG+   I ++ + L SL+  FDW L
Sbjct:  322 MRKLQEEIRAALGPNKEKITEEDLEKVEYLKMVIEEAFRLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFVDNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSL 464          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.066e-31
Identity = 68/178 (38.20%), Postives = 107/178 (60.11%), Query Frame = -1
Query:   76 EALSKARLELEQTIG-RGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTW-DNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVPMAI 591
            E + K + E+  TI   G  ++E ++  + YL+AV+KE FR+HP  PL LPR  + DV++ G+ +  G++VL+NAW+I RD + W  +   F PER L S LD  G++ + IPFG+GRRICPG+ LA+ ++ + L +L+  FDW +              FG+ + +  PL A P ++
Sbjct:  319 ECMKKLQNEIRSTIRPHGSYIKEKEVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDLAEDFGLDVCRKNPLIAFPSSV 496          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.066e-31
Identity = 68/176 (38.64%), Postives = 105/176 (59.66%), Query Frame = -1
Query:   76 LSKARLELEQTIG-RGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTW-DNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVPMAI 585
            + K + E+  TI   G  ++E D+  + YL+AV+KE FR+HP  PL LPR  S DV++ G+ +  G++V++NAWAI RD + W  +   F PER L S LD  G++   IPFG+GRRICPG+ LA+ ++ + + +L+  FDW+               FG+ + +  PL A P ++
Sbjct:  321 MKKLQDEIRSTIRPHGSYIKEKDVENMKYLKAVIKEVFRVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFGLDVCRKFPLIAFPSSV 496          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.310e-31
Identity = 62/170 (36.47%), Postives = 104/170 (61.18%), Query Frame = -1
Query:   76 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKLXXXXXXXXXKFGITLQKAQPLRAVPMAI 585
            + K + E+ + +G    +   D+  L Y++ V+KET+RLH  +P+ +PR+A T+ +I G+ +  G+++ VNAWAIGR+   W +P  F+PERF+ S+++ KG +FEL+PFG+GRR CP + + +  +   L +L+  FDWK            G+T  +  PL  VP+ +
Sbjct:  330 MKKVQAEIREHVGDKGIVTYDDLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWKATEEVSVEEAP-GLTSHRKHPLHLVPVNV 498          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.935e-31
Identity = 62/143 (43.36%), Postives = 95/143 (66.43%), Query Frame = -1
Query:  160 LSKARLELEQTIGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 585
            + K + E+  T+G  K  ++E D+ +L Y + V+KET RLHP  PL LPR+  + ++I G+ V   +++LVN +A+GRD   W+N   F P+RFL S +D KG+N+E IPFG+GRRICPG+ +   ++ + L +L+  FDW L
Sbjct:  323 MKKVQDEIRTTLGDKKERIKEEDLNQLHYFKLVVKETLRLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGL 465          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.183e-30
Identity = 61/144 (42.36%), Postives = 99/144 (68.75%), Query Frame = -1
Query:  160 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            +A+ +A+ E+   +   + +EE D+++L Y+++V+KE  RLHP APL +PR+ + +  I GF +   ++VLVNA +I  D   W+NP  F+PERFL S +D KG++FE++PFG GRR CPG+  A+ ++ + L +L+  FDW+L
Sbjct:  322 KAMKRAQEEVRDLVTGKEMVEEIDLSKLLYIKSVVKEVLRLHPPAPLLVPREITENCTIKGFEIPAKTRVLVNAKSIAMDPCCWENPNEFLPERFLVSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWEL 465          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.545e-30
Identity = 60/141 (42.55%), Postives = 87/141 (61.70%), Query Frame = -1
Query:  160 SKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 582
            +KA+ ++ +        +E+D+  L YL+ V+KET RLH   PL +PR+   + EI G+T+   +KV+VN WA+GRD   WD+   F PERF    +D  G NFE +PFG GRRICPG+   +  +++ L  L+  FDWKL
Sbjct:  326 AKAQAKVREAFRDKVTFDENDVEELKYLKLVIKETMRLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKL 466          
The following BLAST results are available for this feature:
BLAST of CX296888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
C71BS_ARATH1.825e-3144.06Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BX_ARATH2.384e-3140.14Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71DA_SOYBN3.113e-3137.79Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71B5_ARATH4.066e-3141.96Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AI_ARATH4.066e-3138.20Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH4.066e-3138.64Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH5.310e-3136.47Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71BF_ARATH6.935e-3143.36Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71A9_SOYBN1.183e-3042.36Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71D7_SOLCH1.545e-3042.55Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC05803H09SK FerrChloL1 Citrus clementina cDNA clone C05803H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296888 ID=CX296888; Name=CX296888; organism=Citrus clementina; type=EST; length=591bp
AAATTAATTAACCAATGATAAAGTGCTTTATTGGCTATAAACTATATATA
CATATACATATATGATGTGGGGCTAAATGGCCATAGGGACAGCACGAAGG
GGTTGAGCCTTCTGTAAGGTTATACCAAATTTCTCTTCCATGTCCATCTT
CTCATCTTCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCTAACATTA
TATGTAACATTCTGATTGCCAATGGCAAACCAGGACAAATGCGTCGCCCA
GCTCCAAAGGGGATTAGCTCAAAATTGCGGCCTTTGACATCAAGATCTGA
TCCCAAGAACCTTTCGGGCATGAAAATGAGAGGGTTGTCCCATGTGCTTT
CATCTCTGCCAATAGCCCACGCATTGACTAAAACTTTTGAACCTTTTTGC
ACTGTGAAGCCAGCGATCTCTACGTCTGTTGAGGCTTTACGGGGGAGAAA
TAAGGGAGCTACTGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCTTGTA
GATAAGGTAATCGAGTGATGTCTGATTCCTCAAGTGGTTTGCCCCTGCCA
ATTGTTTGTTCCAGCTCCAATCTTGCTTTTGATAAAGCCTC
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