CX296888

Overview
NameCX296888
Unique NameCX296888
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length591
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.708e-29
Identity = 67/174 (38.51%), Postives = 93/174 (53.45%), Query Frame = -1
Query:   76 LSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAVPMAI 585
            + K + E+ +   +      S    L YL++V+ ET RLHP APL LPR+     EI G+ +   S+V+VNAWAIGRD   W     F PERF+   ++ K  +FE IPFGAGRR+CPGL   +  +  +L  L+  FDWKL              FGIT+ +   L  +P  +
Sbjct:  321 MEKVQTEVRRVFDKEGRPNGSGTENLKYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVARKDDLYLIPKTV 494          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.231e-29
Identity = 68/162 (41.98%), Postives = 99/162 (61.11%), Query Frame = -1
Query:   88 IGRGKP-LEESDITRLPYLQAVLKETFRLHPVAP-LFLPRKASTDVEIAGFT-VQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL----XXXXXXXXXKFGITLQKAQPLRAV 552
            + +GK  + E D+  + YL+AV+KE+ RLHP    L +PR++  DV + G+  +   ++ ++NAWAIGRD  +W+NP  + PERFL SD DVKG NF+L+PFGAGRR CPG   AI ++ + L  L++ FD+ L               GIT ++  PL  V
Sbjct:  340 LAQGKSEITEDDLKNMQYLRAVIKESLRLHPTQESLLVPRESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGITTRRKLPLLVV 501          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.914e-29
Identity = 64/152 (42.11%), Postives = 88/152 (57.89%), Query Frame = -1
Query:  160 EALSKARLELEQTI-GRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSD-------LDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            EA++KA+ E+   + G+     E  + +L Y + V+KE  RLHPV PL LPR      ++ GF V KG+KV+VNAWA+ R    W +P  F PERF   D       +D +G  FE IPFG+GRR+CPG    +  L +M+  L+  FDW L
Sbjct:  327 EAMAKAQAEVRGALDGKSPEDHEGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSL 478          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.914e-29
Identity = 66/177 (37.29%), Postives = 104/177 (58.76%), Query Frame = -1
Query:   82 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKAST-DVEIA-GFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFL----GSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDW-KLXXXXXXXXXKFGITLQKAQPLRAVPM 591
            EA  KA+ EL+  +G  + +++SDI +LPY+QAV+KE  R+HP  PL    + ST DV +  G  V  G+  +VN W+I  D + W++P  F PERF+    G ++DV+G +  L PFGAGRR+CPG  L +  +++ +  L++ F+W               ++ + A+PL  VP+
Sbjct:  367 EAQKKAQAELDAVVGHDRSVKDSDIPKLPYIQAVVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWLPHAEHPVDLSEVLKLSCEMARPLHCVPV 543          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.806e-29
Identity = 63/141 (44.68%), Postives = 96/141 (68.09%), Query Frame = -1
Query:  160 RLELE-QTIGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPL-IFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 573
            RL+ E +TI + K  + E +I  + YL+AV+KE  RLHP  PL +P +++ DV +    +  G++VL+NAWAIGR+ +TW   +  F PER L S +D +G+ FELIPFG+GRRICP +  A+ +  ++L +L++ FDW+L
Sbjct:  316 RLQEEVRTICKDKSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRL 456          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 4.970e-29
Identity = 59/145 (40.69%), Postives = 94/145 (64.83%), Query Frame = -1
Query:  160 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTW-DNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            E L + + E+         + E D+  + YL+AV+KET RLHP  PL +P +++ DV++  + +  G+ V++NAWAIGR+ +TW  +   F PER L S +D +G++ EL+PFGAGRRICP +  A+ +  ++L +L++ FDW L
Sbjct:  314 ECLDRLQEEVRMVCKDKSGVSEDDLQDMKYLKAVIKETLRLHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTL 458          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.970e-29
Identity = 61/145 (42.07%), Postives = 88/145 (60.69%), Query Frame = -1
Query:  160 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTW-DNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 591
            E L K + E+         +   ++  + YL+AV+KE  RLHP  PL +PR  S DV++ G+ +  G++V++NAWAI RD +TW  +   F PER   S  D  GRNF+ IPFGAGRR+CPG+ L   M  + L +L+  FDW++
Sbjct:  320 ECLKKLQDEIRSVSKMNSYVSGKEVENMNYLKAVIKEVLRLHPPLPLLVPRLLSEDVKLKGYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHFDSTWDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRV 464          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 6.491e-29
Identity = 72/169 (42.60%), Postives = 96/169 (56.80%), Query Frame = -1
Query:   88 EALSKARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL-XXXXXXXXXKFGITLQKAQPLRAV 591
            E L K + EL+  +G+ + ++ESD+ +L YL+ V+ ET RL+  APL LP   S +  I G+ V + + VL+NAWAI RD   W     F PERF     + KG   +LI FG GRR CPG  LAIR + + L  LI  FDWKL          + G TL K  PL+A+
Sbjct:  323 EVLKKVKDELDTHVGQDRLVDESDLPKLTYLKNVINETLRLYTPAPLLLPHSTSDECNIGGYKVPQDTIVLINAWAIHRDPELWTEATTFKPERF-----EKKGELEKLIAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKLINGDKIDLAERDGFTLTKLVPLKAM 486          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.478e-29
Identity = 59/133 (44.36%), Postives = 91/133 (68.42%), Query Frame = -1
Query:  160 IGRGKP-LEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFT-VQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDWKL 552
            + +GK  + E D+  + YL+AV+KE+ RLHP   L +PR++  DV++ G+  +   ++ L+N WAIGRD  +W+NP  F PERFL +D+D+KG  FEL+PFG+GRR CPG   AI ++ + L  L++ F++ L
Sbjct:  341 LAQGKSEITEDDLKNMQYLRAVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFAL 473          
BLAST of CX296888 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.107e-28
Identity = 65/169 (38.46%), Postives = 97/169 (57.40%), Query Frame = -1
Query:   85 KARLELEQTIGRGKPLEESDITRLPYLQAVLKETFRLHPVAPLFLPRKASTDVEIAGFTVQKGSKVLVNAWAIGRDESTWDNPLIFMPERFLGSDLDVKGRNFELIPFGAGRRICPGLPLAIRMLHIMLGSLINSFDW----KLXXXXXXXXXKFGITLQKAQPLRAVP 579
            KA+ EL Q     + + E+D+  L YL++V+KET RLHP + L +PR+      I G+ +   +KV++N WAIGRD   W +   F+PERF  S +D KG +FE IPFGAGRR+CPG+   +  + + L  L+  F+W    K+          FG+T+ +   L  +P
Sbjct:  331 KAQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPPSQL-IPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKLFLIP 498          
The following BLAST results are available for this feature:
BLAST of CX296888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
C71D9_SOYBN1.708e-2938.51Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71A2_SOLME2.231e-2941.98Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C99A1_SORBI2.914e-2942.11Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C78A4_PINRA2.914e-2937.29Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71AQ_ARATH3.806e-2944.68Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH4.970e-2940.69Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH4.970e-2942.07Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C81E1_GLYEC6.491e-2942.60Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C71A4_SOLME8.478e-2944.36Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71D8_SOYBN1.107e-2838.46Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05803H09SK FerrChloL1 Citrus clementina cDNA clone C05803H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296888 ID=CX296888; Name=CX296888; organism=Citrus clementina; type=EST; length=591bp
AAATTAATTAACCAATGATAAAGTGCTTTATTGGCTATAAACTATATATA
CATATACATATATGATGTGGGGCTAAATGGCCATAGGGACAGCACGAAGG
GGTTGAGCCTTCTGTAAGGTTATACCAAATTTCTCTTCCATGTCCATCTT
CTCATCTTCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCTAACATTA
TATGTAACATTCTGATTGCCAATGGCAAACCAGGACAAATGCGTCGCCCA
GCTCCAAAGGGGATTAGCTCAAAATTGCGGCCTTTGACATCAAGATCTGA
TCCCAAGAACCTTTCGGGCATGAAAATGAGAGGGTTGTCCCATGTGCTTT
CATCTCTGCCAATAGCCCACGCATTGACTAAAACTTTTGAACCTTTTTGC
ACTGTGAAGCCAGCGATCTCTACGTCTGTTGAGGCTTTACGGGGGAGAAA
TAAGGGAGCTACTGGGTGCAACCTGAAGGTTTCTTTGAGTACTGCTTGTA
GATAAGGTAATCGAGTGATGTCTGATTCCTCAAGTGGTTTGCCCCTGCCA
ATTGTTTGTTCCAGCTCCAATCTTGCTTTTGATAAAGCCTC
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