CX297491
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EFG_HELPG (Elongation factor G OS=Helicobacter pylori (strain G27) GN=fusA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 1 Query: 250 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSD 717 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P++E FG+S LR+AT G+ + FDH+ + S+ Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEVPSN 681
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EFG_HELP2 (Elongation factor G OS=Helicobacter pylori (strain P12) GN=fusA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 1 Query: 250 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSD 717 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P++E FG+S LR+AT G+ + FDH+ + S+ Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEVPSN 681
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EFG_HELAH (Elongation factor G OS=Helicobacter acinonychis (strain Sheeba) GN=fusA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 1 Query: 250 GVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-------DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSD 717 G +++NEI V+ G Q A + G LA + + F+V DV A G A R A P LLEP+ VE++ PE+ +G + LN++RG + R G + N A++P++E FG+S LR+AT G+ + FDH+ + S+ Sbjct: 521 GYEFVNEISGGVIPKEYIPAVDKGIQEAMQNGVLAGYPV--VDFKVTLYDGSYHDVDSSEMAFKIAGSMAFKEASRA-------ANPVLLEPMMKVEVEVPEEYMGDVIGDLNRRRGQINSMDDRLGLKIVN--AFVPLVEMFGYSTDLRSATQGRGTYSMEFDHYGEVPSN 681
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EFG_RICPU (Elongation factor G OS=Rickettsia peacockii (strain Rustic) GN=fusA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 55/199 (27.64%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 136 ARSKILSEEFGWDKDLA----KKIWCFGPETTGPNMVVDMCKGVQY-LNEIKDS-VVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSS 714 AR KI+ E KDL KI+ F + G + + GV+ LN I+++ V+AG+ + L + + V + A A R G P+LLEP+ VE+ P++ +G I LN +RG + + P + A +P+ E FG+ TLR+ + G+A + +F H+D + S Sbjct: 507 ARVKIIFEPLKEVKDLKDEDKNKIFVFESKIIGGAVPKEYIPGVEKGLNNIRETGVIAGYPMIDFKATLVDGAFHDVDSSVLAFEIAAKAAFREG--------------MPKGNPKLLEPIMQVEVITPDEYMGDIIGDLNSRRGQI--QSMDPRGNAQVVTANIPLAEMFGYVNTLRSLSQGRAQFSMIFSHYDQVPS 689
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EFG_RICAE (Elongation factor G OS=Rickettsia africae (strain ESF-5) GN=fusA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 55/199 (27.64%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 136 ARSKILSEEFGWDKDLA----KKIWCFGPETTGPNMVVDMCKGVQY-LNEIKDS-VVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSS 714 AR KI+ E KDL KI+ F + G + + GV+ LN I+++ V+AG+ + L + + V + A A R G P+LLEP+ VE+ P++ +G I LN +RG + + P + A +P+ E FG+ TLR+ + G+A + +F H+D + S Sbjct: 507 ARVKIIFEPLKEVKDLKDEDKNKIFVFESKIVGGAVPKEYIPGVEKGLNNIRETGVIAGYPMIDFKATLVDGAFHDVDSSVLAFEIAAKAAFREG--------------MPKGNPKLLEPIMQVEVITPDEYMGDIIGDLNSRRGQI--QSMDPRGNAQVVTANVPLAEMFGYVNTLRSLSQGRAQFSMIFSHYDQVPS 689
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EFG1_BURTA (Elongation factor G 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=fusA1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 1 Query: 247 KGVQYLNEIKDSVVA---------GFQWASKEGALAEENMRGICFEVC-----DVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHV--FEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHW 699 KG ++L+EIK V+ G + K G LA + + + DV + +A G A R AKP LLEP+ VE++ PE+ +G + L+ +RG V E++ G L ++A +P+ E FG+S +LR+AT G+A T F H+ Sbjct: 527 KGYEFLDEIKGGVIPREFIPAVNKGIEETLKSGVLAGYPVVDVKVHLTFGSYHDVDSNENAFRMAGSMAFKEAMR-------RAKPVLLEPMMAVEVETPEEFMGNVMGDLSSRRGIVQGMEDIAGGGGKL--VRAEVPLAEMFGYSTSLRSATQGRATYTMEFKHY 684
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EFG_THEFY (Elongation factor G OS=Thermobifida fusca (strain YX) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 53/161 (32.92%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 235 VDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSD 717 V+ G + E SV AG Q A++ G LA + GI + D H ++ + AS+ A P LLEPV VE+ PE+ +G + LN +RG + +R GT + +KA +P+ E FG+ G LR+ T G+A T VF + + S+ Sbjct: 536 VNNITGGRIPREYIPSVDAGCQEAAQFGVLAGYPLVGIKVTLQDGAYHDVDSSELAFKIAGSMAFKEAASK--ANPVLLEPVMAVEVTTPEEYMGDVIGDLNSRRGQIQSMEERAGTRV--VKALVPLSEMFGYVGDLRSRTQGRANYTMVFHSYAEVPSN 692
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EFG_RICRH (Elongation factor G OS=Rickettsia rhipicephali GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 55/197 (27.92%), Postives = 90/197 (45.69%), Query Frame = 1 Query: 136 ARSKILSEEFGWDKDLAK--KIWCFGPETTGPNMVVDMCKGVQY-LNEIKDS-VVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSS 714 AR KI+ E KDL KI+ F + G + + GV+ LN I+++ V+AG+ + L + + V + A A R G P+LLEP+ VE+ P++ +G I LN +RG + + P + A +P+ E FG+ TLR+ + G+A + +F H+D + S Sbjct: 507 ARVKIIFEPLKDVKDLKDEDKIFVFESKIIGGAVPKEYIPGVEKGLNNIRETGVIAGYPMIDFKATLVDGAFHDVDSSVLAFEIAAKAAFREG--------------MPKGNPKLLEPIMQVEVITPDEYMGDIIGDLNSRRGQI--QSMDPRGNAQVVTANVPLAEMFGYVNTLRSLSQGRAQFSMIFSHYDQVPS 687
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EFG_RICM5 (Elongation factor G OS=Rickettsia massiliae (strain Mtu5) GN=fusA PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 55/197 (27.92%), Postives = 90/197 (45.69%), Query Frame = 1 Query: 136 ARSKILSEEFGWDKDLAK--KIWCFGPETTGPNMVVDMCKGVQY-LNEIKDS-VVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSS 714 AR KI+ E KDL KI+ F + G + + GV+ LN I+++ V+AG+ + L + + V + A A R G P+LLEP+ VE+ P++ +G I LN +RG + + P + A +P+ E FG+ TLR+ + G+A + +F H+D + S Sbjct: 507 ARVKIIFEPLKDVKDLKDEDKIFVFESKIIGGAVPKEYIPGVEKGLNNIRETGVIAGYPMIDFKATLVDGAFHDVDSSVLAFEIAAKAAFREG--------------MPKGNPKLLEPIMQVEVITPDEYMGDIIGDLNSRRGQI--QSMDPRGNAQVVTANVPLAEMFGYVNTLRSLSQGRAQFSMIFSHYDQVPS 687
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EFG_RICCN (Elongation factor G OS=Rickettsia conorii GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 55/199 (27.64%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 136 ARSKILSEEFGWDKDLA----KKIWCFGPETTGPNMVVDMCKGVQY-LNEIKDS-VVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSS 714 AR KI+ E KDL KI+ F + G + + GV+ LN I+++ V+AG+ + L + + V + A A R G P+LLEP+ VE+ P++ +G I LN +RG + + P + A +P+ E FG+ TLR+ + G+A + +F H+D + S Sbjct: 507 ARVKIIFEPLKEVKDLKDEDKNKIFVFESKIIGGAVPKEYIPGVEKGLNNIRETGVIAGYPMIDFKATLVDGAFHDVDSSVLAFEIAAKAAFREG--------------MPKGNPKLLEPIMQVEVITPDEYMGDIIGDLNSRRGQI--QSMDPRGNAQVVTANVPLAEMFGYVNTLRSLSQGRAQFSMIFSHYDQVPS 689 The following BLAST results are available for this feature:
BLAST of CX297491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297491 ID=CX297491; Name=CX297491; organism=Citrus clementina; type=EST; length=725bpback to top |