CX297498

Overview
NameCX297498
Unique NameCX297498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.386e-32
Identity = 86/233 (36.91%), Postives = 125/233 (53.65%), Query Frame = 3
Query:    9 HEEKEYGKLPSNPEEVEDLRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLF-SKVLLPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAK--DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 695
            ++ K  GK P +    ED   + +    +   ++ L+  T NF  +  L       VYKG          Q   +AVK   G NS QG  E+  E++ L  L H NLV+LIG+C + E R+L+YEF+   S++  +F ++    L W +R K+  G A+GL +LHE  +  +I+RD K SNILLD + N  ++DFGLAK  D  +      ++RI GTYGY APEY M G  +
Sbjct:  318 YKNKVLGKSPLSGSIAED---EFSNTESLLVHFETLKTATDNFSSENELGRGGFGSVYKGVFP-------QGQEIAVKRLSG-NSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFS 539          

HSP 2 Score: 24.2534 bits (51), Expect = 3.386e-32
Identity = 9/19 (47.37%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  + ++DV+SFGV+++EI
Sbjct:  536 GQFSVKTDVFSFGVLVIEI 554          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.399e-32
Identity = 74/194 (38.14%), Postives = 115/194 (59.28%), Query Frame = 3
Query:  126 TANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRMKIAFGAAKGLAFLHEAE-KPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            T +F +  V+       VYKG + +          VAVK      S QG  E+  EV  L    H +LV LIGYC E+   +++YE+M +G+++++L+     P L W  R++I  GAA+GL +LH    + +I+RD K++NILLD ++ A ++DFGL+K GP+ D++HVST + G++GY  PEY+    LT +
Sbjct:  484 TDDFDESLVIGVGGFGKVYKGVLRDKTE-------VAVK-RGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEK 669          

HSP 2 Score: 27.7202 bits (60), Expect = 4.399e-32
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  698 QSDVYSFGVVLLEI 739
            +SDVYSFGVV+LE+
Sbjct:  669 KSDVYSFGVVMLEV 682          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.722e-32
Identity = 82/200 (41.00%), Postives = 114/200 (57.00%), Query Frame = 3
Query:   99 FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRMKIAFGAAKGLAFLHEA-EKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 692
            FTY E+  +T NF+  RV+       V  G I+   +       VAVKV    +S QG++ + AEV  L  + H NLV L+GYC E +H  LIYEF+ +G +  +L  K     + W  R++IA  AA GL +LH     P+++RD KT+NILLD    A L+DFGL++  P G ++H+ST + GT GY  PEY  T  L
Sbjct:  569 FTYSEVIKMTNNFQ--RVVGEGGFGVVCHGTINGSEQ-------VAVKVLSQSSS-QGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRL 758          

HSP 2 Score: 28.4906 bits (62), Expect = 5.722e-32
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  698 QSDVYSFGVVLLEI 739
            +SDVYSFG+VLLEI
Sbjct:  761 KSDVYSFGIVLLEI 774          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.580e-32
Identity = 86/203 (42.36%), Postives = 117/203 (57.64%), Query Frame = 3
Query:   99 FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLP-WSIRMKIAFGAAKGLAFLH-EAEKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            FTY E+  +T NF   RV+       V  G ++   +       VAVK+    +S QG++E+ AEV  L  + H NLV L+GYC E +H  LIYEF+  G +  +L  K   P+  W  R++IA  AA GL +LH     P+++RD KT+NILLD  Y A L+DFGL++  P G +SHVST I GT GY  PEY  T  L+ +
Sbjct:  570 FTYSEVTKMTNNF--GRVVGEGGFGVVCHGTVNGSEQ-------VAVKLLS-QSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGKPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEK 762          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 9.705e-32
Identity = 81/203 (39.90%), Postives = 115/203 (56.65%), Query Frame = 3
Query:   99 FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRMKIAFGAAKGLAFLHEA-EKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            FTY E+  +T NF  +RVL       VY G         L    VAVK+    +S QG++E+ AEV  L  + H +LV L+GYC + ++  LIYE+M +G +  N+  K  +  L W  RM+IA  AA+GL +LH     P+++RD K +NILL+    A L+DFGL++  P   +SHV T + GT GY  PEY  T  L+ +
Sbjct:  560 FTYSEVLKMTKNF--ERVLGKGGFGTVYHG--------NLDDTQVAVKMLS-HSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEK 751          

HSP 2 Score: 29.261 bits (64), Expect = 9.705e-32
Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  692 NSQSDVYSFGVVLLEI 739
            + +SDVYSFGVVLLEI
Sbjct:  749 SEKSDVYSFGVVLLEI 764          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 1.269e-31
Identity = 74/215 (34.42%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   57 EDLRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRMKIAFGAAKGLAFLHE-AEKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 695
            E+   +  +   + F ++ +R+ T +F     +       VYKG     L +GL+     + +H G    QG+ E+  EV+ +  L H NLVKL G+  ++  R+L+YEF+   S++  LF  +    L W  R  I  G ++GL +LHE +E P+I+RD K+SN+LLD      +SDFG+A+     +   V+ R++GTYGY APEY M G  +
Sbjct:  307 ENAENEFESTDSLHFDFETIRVATDDFSLTNKIGEGGFGVVYKGH----LPDGLEIAVKRLSIHSG----QGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFS 513          

HSP 2 Score: 26.1794 bits (56), Expect = 1.269e-31
Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  + ++DVYSFGV++LEI
Sbjct:  510 GRFSVKTDVYSFGVLVLEI 528          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.634e-31
Identity = 84/239 (35.15%), Postives = 131/239 (54.81%), Query Frame = 3
Query:   33 LPSNPEEVEDLRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLH-EAEKPVIYRDFKTSNILLDTDYNAXLSDFGLAK----DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPRVMCTALVSCFL 734
            LP  P  +E ++          + + EL   T++F     +       VYKG +   L        VAVK  +   S QG +E+  E+  L  L H NLV L+GYC +   ++L+YE+M  GS+++ L ++   PL  ++R++IA G+A+G+ +LH EA+ P+I+RD K SNILLD+  N  ++DFG++K    DG    + HV+T + GT GY  PEY ++  LT +    +L   FL
Sbjct:  606 LPKPPMNMESVK---------GYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGL-------VVAVKRAE-QGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFL 827          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.646e-31
Identity = 82/208 (39.42%), Postives = 121/208 (58.17%), Query Frame = 3
Query:   99 FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLF-SKVLLPLP-----WSIRMKIAFGAAKGLAFLHE-AEKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            F + EL+  T NF ++ V        VY G    ++  G Q   VA+K     +S QG  E+  E+  L  L H +LV LIG+C E++  +L+YE+M+ G + ++L+ SK   P P     W  R++I  G+A+GL +LH  A + +I+RD KT+NILLD +  A +SDFGL+KD P  D+ HVST + G++GY  PEY     LT +
Sbjct:  513 FPFTELQTATQNFDENAVCGVGGFGKVYIG----EIDGGTQ---VAIK-RGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPM-DEGHVSTAVKGSFGYLDPEYFRRQQLTDK 711          

HSP 2 Score: 26.9498 bits (58), Expect = 1.646e-31
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2
Query:  698 QSDVYSFGVVLLEI 739
            +SDVYSFGVVL E+
Sbjct:  711 KSDVYSFGVVLFEV 724          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.787e-31
Identity = 75/206 (36.41%), Postives = 119/206 (57.77%), Query Frame = 3
Query:   90 LIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLF-SKVLLPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAK--DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 695
            L+   +D +R+ T +F +D  L       VYKG +  D  E +    +++K   GDN      E++ EV  +  L H NLV+L+G+C + E R+LIYEF    S+++ +F S   + L W  R +I  G A+GL +LHE  +  +++RD K SN+LLD   N  ++DFG+AK  D  +  ++  ++++ GTYGY APEY M+G  +
Sbjct:  329 LLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVL--DYGEEIAVKRLSMKSGQGDN------EFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFS 526          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.799e-31
Identity = 80/215 (37.21%), Postives = 119/215 (55.35%), Query Frame = 3
Query:   63 LRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS-KVLLPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAK--DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 695
            L++D  ++ L+   ++ L+  T NF  +  L       VYKG  S           +AVK      S QG  E+  E++ L  L H NLV+L+G+C E + R+L+YEF+   S++N +F  K    L W +R K+  G A+GL +LHE  +  +I+RD K SNILLD + N  ++DFGLAK  D  +      +++I GTYGY APEY + G  +
Sbjct:  338 LQKDEFSDSLVV-DFETLKAATDNFSPENELGRGGFGSVYKGVFSGGQE-------IAVK-RLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFS 543          

HSP 2 Score: 24.2534 bits (51), Expect = 2.799e-31
Identity = 9/19 (47.37%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  + ++DV+SFGV+++EI
Sbjct:  540 GQFSVKTDVFSFGVLVIEI 558          
The following BLAST results are available for this feature:
BLAST of CX297498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
CRK29_ARATH3.386e-3236.91Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
Y2393_ARATH4.399e-3238.14Probable receptor-like protein kinase At2g39360 OS... [more]
PAM74_ARATH5.722e-3241.00Probable LRR receptor-like serine/threonine-protei... [more]
Y5596_ARATH9.580e-3242.36Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH9.705e-3239.90Probable LRR receptor-like protein kinase At1g5189... [more]
CRK27_ARATH1.269e-3134.42Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y5374_ARATH1.634e-3135.15Probable LRR receptor-like serine/threonine-protei... [more]
Y5613_ARATH1.646e-3139.42Probable receptor-like protein kinase At5g61350 OS... [more]
CRK41_ARATH2.787e-3136.41Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK28_ARATH2.799e-3137.21Cysteine-rich receptor-like protein kinase 28 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC06002B05SK RindPdig24 Citrus clementina cDNA clone C06002B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297498 ID=CX297498; Name=CX297498; organism=Citrus clementina; type=EST; length=745bp
GAATTCGGCACGAGGAAAAGGAATACGGTAAGTTACCATCAAATCCGGAA
GAAGTAGAGGACCTGCGTCGTGATTCGGCTGCAAATCCATTGATTGCATT
CACGTACGATGAACTGAGAATCATCACTGCAAATTTCAGGCAAGATCGTG
TGTTGGGTGGAGGCGGATTTGGATGTGTTTACAAAGGGTTCATTTCTGAG
GACTTAAGGGAAGGGCTTCAGCCTGTTCCAGTGGCTGTTAAGGTTCATGA
TGGTGATAACAGTTATCAAGGCCACCGGGAATGGCTGGCAGAAGTCATAT
TTTTGGGACACCTTTCTCATCCGAATTTGGTTAAGTTGATCGGTTACTGC
TGTGAAGATGAACACCGGGTACTAATATATGAGTTCATGGCTCGGGGTAG
TGTCGAAAACAATCTTTTCTCAAAAGTACTGCTTCCTCTTCCATGGTCTA
TCAGAATGAAGATTGCATTTGGTGCTGCAAAAGGACTGGCCTTCCTTCAT
GAAGCAGAGAAACCTGTCATCTATCGCGACTTTAAGACATCTAATATTCT
CTTAGATACGGACTACAATGCANAGCTCTCGGACTTTGGCCTTGCCAAAG
ATGGACCAGAGGGGGACAAATCTCACGTTTCAACTCGCATAATGGGAACT
TATGGATATGCAGCCCCTGAGTACATAATGACGGGTCATCTAACTCCCAG
AGTGATGTGTACAGCTTTGGTGTCGTGCTTCTTGAGATCTGACAG
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