CX297498

Overview
NameCX297498
Unique NameCX297498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.800e-31
Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 3
Query:   72 DSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS-KVLLPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            D  +   + F +  + + T NF ++  L       VYKG +  +         +AVK     NS QG +E+  EV+ +  L H NLV+L+G+C E + ++L+YEF++  S++  LF  K+   L W  R  I  G  +GL +LH+  +  +I+RD K SNILLD D N  ++DFG+A++         + R++GT+GY  PEY+  G  + +
Sbjct:  318 DMTSPQSLQFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETE-------IAVK-RLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTK 521          

HSP 2 Score: 29.261 bits (64), Expect = 2.800e-31
Identity = 12/19 (63.16%), Postives = 17/19 (89.47%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  +++SDVYSFGV++LEI
Sbjct:  516 GQFSTKSDVYSFGVLILEI 534          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.802e-31
Identity = 71/175 (40.57%), Postives = 105/175 (60.00%), Query Frame = 3
Query:  177 VYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVL-LPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 695
            VYKG +S  L+       VAVK      S QG +E+  EV+ +  L H NLVKL+GYC E E ++L+YEF+   S+++ LF   + + L W+ R KI  G A+G+ +LH+  +  +I+RD K  NILLD D N  ++DFG+A+         ++ R++GTYGY +PEY M G  +
Sbjct:  340 VYKGTLSSGLQ-------VAVK-RLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFS 506          

HSP 2 Score: 28.1054 bits (61), Expect = 2.802e-31
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  + +SDVYSFGV++LEI
Sbjct:  503 GQFSMKSDVYSFGVLVLEI 521          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.825e-31
Identity = 71/206 (34.47%), Postives = 115/206 (55.83%), Query Frame = 3
Query:  108 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP-------LPWSIRMKIAFGAAKGLAFLHE-AEKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            DEL  +  NF    ++       V+ G    +         VA+K  D  +S +   ++ +++  +  L H + V+L+GYC E  +R+LIY+F  +GS+ + L  +  +        L W+ R+KIA+GAAKGL FLHE  + P+++RD ++SN+LL  D+ A ++DF L     +      STR++GT+GY APEY MTG +T +
Sbjct:   64 DELNRMAGNFGNKALIGEGSYGRVFCGKFKGEA--------VAIKKLDASSSEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQK 261          

HSP 2 Score: 29.6462 bits (65), Expect = 2.825e-31
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G    +SDVYSFGVVLLE+
Sbjct:  256 GQITQKSDVYSFGVVLLEL 274          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.052e-31
Identity = 83/231 (35.93%), Postives = 120/231 (51.95%), Query Frame = 3
Query:    9 HEEKEYGKLPSNPEEVEDLRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLF-SKVLLPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 695
            H  K   K    PEE +     S     + F +  +   T  F     L       VYKG     L  G+Q   VAVK      S QG +E+  EV+ +  L H NLVKL+G+C E E ++L+YEF++  S++  LF S++   L W+ R KI  G A+G+ +LH+  +  +I+RD K  NILLD D N  ++DFG+A+          + R++GTYGY +PEY M G  +
Sbjct:  303 HASKRAKKTYDTPEEDDITTAGS-----LQFDFKVIEAATDKFSMCNKLGQGGFGQVYKG----TLPNGVQ---VAVK-RLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFS 520          

HSP 2 Score: 28.1054 bits (61), Expect = 8.052e-31
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  + +SDVYSFGV++LEI
Sbjct:  517 GQFSMKSDVYSFGVLVLEI 535          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.110e-31
Identity = 84/229 (36.68%), Postives = 131/229 (57.21%), Query Frame = 3
Query:   36 PSNPEEVEDLRRDSAANPLIA-----FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLF-SKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            P +  +  D R   ++ P I      F+Y ++ I+T NF+  R+L       VY GF++     G + V V +  H   +S QG++++ AEV  L  + H NLV L+GYC E ++  LIYE+MA G ++ ++  ++    L W  R+KI   +A+GL +LH   KP +++RD KT+NILL+  + A L+DFGL++      ++HVST + GT GY  PEY  T  LT +
Sbjct:  542 PPSYMQASDGRLPRSSEPAIVTKNRRFSYSQVVIMTNNFQ--RILGKGGFGMVYHGFVN-----GTEQVAVKILSH---SSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEK 760          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.044e-30
Identity = 82/202 (40.59%), Postives = 114/202 (56.44%), Query Frame = 3
Query:  102 TYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVL-LPLPWSIRMKIAFGAAKGLAFLHEA-EKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            TY E+  +T NF  +RVL       VY G         L    VAVK+    +S QG++E+ AEV  L  + H +LV L+GYC + ++  LIYE+MA G +  N+  K     L W  RM+IA  AA+GL +LH     P+++RD KT+NILL+    A L+DFGL++  P   + HVST + GT GY  PEY  T  L+ +
Sbjct:  575 TYPEVLKMTNNF--ERVLGKGGFGTVYHG--------NLDGAEVAVKMLS-HSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEK 765          

HSP 2 Score: 29.261 bits (64), Expect = 1.044e-30
Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  692 NSQSDVYSFGVVLLEI 739
            + +SDVYSFGVVLLEI
Sbjct:  763 SEKSDVYSFGVVLLEI 778          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.383e-30
Identity = 81/203 (39.90%), Postives = 120/203 (59.11%), Query Frame = 3
Query:   99 FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP-LPWSIRMKIAFGAAKGLAFLHEAEKPV-IYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            FTY E+  +T NF+  ++L       VY G ++     G + V V +  H   +S QG++++ AEV  L  + H NLV L+GYC E +   LIYE+MA G ++ ++  K     L W  R+KIA  AA+GL +LH   KP+ ++RD KT+NILL+  ++  L+DFGL++  P   ++HVST + GT GY  PEY  T  LT +
Sbjct:  567 FTYAEVLTMTNNFQ--KILGKGGFGIVYYGSVN-----GTEQVAVKMLSH---SSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEK 759          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.777e-30
Identity = 81/230 (35.22%), Postives = 119/230 (51.74%), Query Frame = 3
Query:    3 IRHEEKEYGKLPSNPEEVEDLRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLL-PLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG 686
            ++ +E E  + P+   + +D+    +    + F +  +   T  F     L       VYKG            V VAVK     NS QG +E+  EV+ +  L H NLVKL+GYC E E ++L+YEF+   S++  LF   +   L WS R KI  G A+G+ +LH+  +  +I+RD K  NILLD D N  ++DFG+A+          + R++GTYGY APEY M G
Sbjct:  304 VKRKETEVTEPPAETTDGDDITTAGS----LQFDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSG-------VQVAVK-RLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYG 521          

HSP 2 Score: 28.1054 bits (61), Expect = 1.777e-30
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  + +SDVYSFGV++LEI
Sbjct:  521 GKFSMKSDVYSFGVLVLEI 539          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.924e-30
Identity = 80/234 (34.19%), Postives = 124/234 (52.99%), Query Frame = 3
Query:    3 IRHEEKEYGKLPSNPEEVEDLRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVL-LPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAK-DGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 695
            ++   KE  +   N  E E++  DS     + F +  L+  T++F  +  L       VYKG +S+  +       +AVK     N+ QG  E+  E + +  L H NLVKL+GY  E   R+L+YEF+   S++  +F  +    L W IR KI  G A+GL +LH+  +  +I+RD K SNILLD +    ++DFG+A+    +      + RI+GT+GY APEY+M G  +
Sbjct:  305 LKLRRKENIRNSENKHENENISTDS-----MKFDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQK-------IAVK-RLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFS 525          

HSP 2 Score: 26.5646 bits (57), Expect = 3.924e-30
Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  + ++DVYSFGV++LEI
Sbjct:  522 GQFSFKTDVYSFGVLVLEI 540          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.025e-30
Identity = 83/200 (41.50%), Postives = 115/200 (57.50%), Query Frame = 3
Query:   99 FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL-PWSIRMKIAFGAAKGLAFLH-EAEKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHL 692
            FTY E+  +T NF+  RVL       VY G +    +       VAVKV    +S QG +E+ AEV  L  + H NLV L+GYCCE ++  L+YEF+  G ++ +L  K    +  WSIR++IA  AA GL +LH     P+++RD KT+NILLD ++ A L+DFGL++      +S  ST I GT GY  PE   +G L
Sbjct:  554 FTYSEVVQVTKNFQ--RVLGKGGFGMVYHGTVKGSEQ-------VAVKVLS-QSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRL 743          
The following BLAST results are available for this feature:
BLAST of CX297498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
CRK31_ARATH2.800e-3133.49Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH2.802e-3140.57Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
Y2197_ARATH2.825e-3134.47Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
CRK5_ARATH8.052e-3135.93Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
Y5182_ARATH8.110e-3136.68Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH1.044e-3040.59Probable LRR receptor-like serine/threonine-protei... [more]
Y5181_ARATH1.383e-3039.90Probable LRR receptor-like serine/threonine-protei... [more]
CRK20_ARATH1.777e-3035.22Putative cysteine-rich receptor-like protein kinas... [more]
CRK26_ARATH3.924e-3034.19Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
RLK7_ARATH4.025e-3041.50Receptor-like protein kinase At5g59670 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC06002B05SK RindPdig24 Citrus clementina cDNA clone C06002B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297498 ID=CX297498; Name=CX297498; organism=Citrus clementina; type=EST; length=745bp
GAATTCGGCACGAGGAAAAGGAATACGGTAAGTTACCATCAAATCCGGAA
GAAGTAGAGGACCTGCGTCGTGATTCGGCTGCAAATCCATTGATTGCATT
CACGTACGATGAACTGAGAATCATCACTGCAAATTTCAGGCAAGATCGTG
TGTTGGGTGGAGGCGGATTTGGATGTGTTTACAAAGGGTTCATTTCTGAG
GACTTAAGGGAAGGGCTTCAGCCTGTTCCAGTGGCTGTTAAGGTTCATGA
TGGTGATAACAGTTATCAAGGCCACCGGGAATGGCTGGCAGAAGTCATAT
TTTTGGGACACCTTTCTCATCCGAATTTGGTTAAGTTGATCGGTTACTGC
TGTGAAGATGAACACCGGGTACTAATATATGAGTTCATGGCTCGGGGTAG
TGTCGAAAACAATCTTTTCTCAAAAGTACTGCTTCCTCTTCCATGGTCTA
TCAGAATGAAGATTGCATTTGGTGCTGCAAAAGGACTGGCCTTCCTTCAT
GAAGCAGAGAAACCTGTCATCTATCGCGACTTTAAGACATCTAATATTCT
CTTAGATACGGACTACAATGCANAGCTCTCGGACTTTGGCCTTGCCAAAG
ATGGACCAGAGGGGGACAAATCTCACGTTTCAACTCGCATAATGGGAACT
TATGGATATGCAGCCCCTGAGTACATAATGACGGGTCATCTAACTCCCAG
AGTGATGTGTACAGCTTTGGTGTCGTGCTTCTTGAGATCTGACAG
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