CX297498

Overview
NameCX297498
Unique NameCX297498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 5.069e-30
Identity = 78/199 (39.20%), Postives = 110/199 (55.28%), Query Frame = 3
Query:   87 PLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLF--SKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEY 674
            PL   T+ +L   T  F  D ++       VYK  + +        V +   +H    S QG RE++AE+  +G + H NLV L+GYC   + R+L+YEFM  GS+E+ L    K  + L WS R KIA G+A+GLAFLH    P +I+RD K+SN+LLD +  A +SDFG+A+     D     + + GT GY  PEY
Sbjct:  867 PLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDG-----SAVAIKKLIHV---SGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEY 1057          

HSP 2 Score: 26.1794 bits (56), Expect = 5.069e-30
Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  692 NSQSDVYSFGVVLLEI 739
            +++ DVYS+GVVLLE+
Sbjct: 1064 STKGDVYSYGVVLLEL 1079          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.866e-30
Identity = 80/200 (40.00%), Postives = 111/200 (55.50%), Query Frame = 3
Query:   90 LIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG 686
            L +FT+ EL + T  F    +L       VY+G   +          VAVK     N   G+ ++  E+  +    H NL++LIGYC     R+L+Y +M+ GSV + L +K    L W+ R KIA GAA+GL +LHE   P +I+RD K +NILLD  + A + DFGLAK     D SHV+T + GT G+ APEY+ TG
Sbjct:  284 LRSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDG-------TVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAKP--ALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHED-SHVTTAVRGTVGHIAPEYLSTG 473          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.610e-30
Identity = 83/192 (43.23%), Postives = 109/192 (56.77%), Query Frame = 3
Query:  108 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEY 674
            +EL   T NF Q  ++       VYK    +  +        AVK   GD   Q  RE+ AEV  L    H NLV L GYC     R+LIY FM  GS++  L  +V   + L W +R+KIA GAA+GLA+LH+  +P VI+RD K+SNILLD  + A L+DFGLA+     D +HV+T ++GT GY  PEY
Sbjct:  745 EELLKSTNNFSQANIIGCGGFGLVYKANFPDGSK-------AAVKRLSGDCG-QMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYD-THVTTDLVGTLGYIPPEY 927          

HSP 2 Score: 26.5646 bits (57), Expect = 8.610e-30
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2
Query:  698 QSDVYSFGVVLLEI 739
            + DVYSFGVVLLE+
Sbjct:  936 RGDVYSFGVVLLEL 949          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 124.405 bits (311), Expect = 1.121e-29
Identity = 80/194 (41.24%), Postives = 112/194 (57.73%), Query Frame = 3
Query:  102 TYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP--LPWSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEY 674
            +YD+L   T +F Q  ++       VYK  + +  +       VA+K   GD   Q  RE+ AEV  L    HPNLV L G+C     R+LIY +M  GS++  L  +   P  L W  R++IA GAAKGL +LHE   P +++RD K+SNILLD ++N+ L+DFGLA+      ++HVST ++GT GY  PEY
Sbjct:  723 SYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKK-------VAIKKLSGDCG-QIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLAR-LMSPYETHVSTDLVGTLGYIPPEY 907          

HSP 2 Score: 26.5646 bits (57), Expect = 1.121e-29
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2
Query:  698 QSDVYSFGVVLLEI 739
            + DVYSFGVVLLE+
Sbjct:  916 KGDVYSFGVVLLEL 929          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.460e-29
Identity = 78/192 (40.62%), Postives = 113/192 (58.85%), Query Frame = 3
Query:  108 DELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP--LPWSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEY 674
            D++   T++F Q  ++       VYK  + +  +       VA+K   GD   Q  RE+ AEV  L    HPNLV L+GYC     ++LIY +M  GS++  L  KV  P  L W  R++IA GAA+GLA+LH++ +P +++RD K+SNILL   + A L+DFGLA+     D +HV+T ++GT GY  PEY
Sbjct:  734 DDILKSTSSFNQANIIGCGGFGLVYKATLPDGTK-------VAIKRLSGDTG-QMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYD-THVTTDLVGTLGYIPPEY 916          

HSP 2 Score: 26.5646 bits (57), Expect = 1.460e-29
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2
Query:  698 QSDVYSFGVVLLEI 739
            + DVYSFGVVLLE+
Sbjct:  925 KGDVYSFGVVLLEL 938          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.462e-29
Identity = 76/204 (37.25%), Postives = 113/204 (55.39%), Query Frame = 3
Query:   99 FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLP--LPWSIRMKIAFGAAKGLAFLHEAE-KPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            FT + + + T  ++   ++       VY+G + +          VAVKV     S QG RE+  E+  L  + H NLV L+GYC E + ++L+Y FM+ GS+ + L+ +      L W  R+ IA GAA+GLA+LH    + VI+RD K+SNILLD    A ++DFG +K  P+   S+VS  + GT GY  PEY  T  L+ +
Sbjct:  585 FTLEYIELATEKYKT--LIGEGGFGSVYRGTLDDGQE-------VAVKVRSA-TSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEK 778          

HSP 2 Score: 27.7202 bits (60), Expect = 1.462e-29
Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  692 NSQSDVYSFGVVLLEI 739
            + +SDV+SFGVVLLEI
Sbjct:  776 SEKSDVFSFGVVLLEI 791          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.463e-29
Identity = 80/204 (39.22%), Postives = 112/204 (54.90%), Query Frame = 3
Query:   93 IAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLH-EAEKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            + FT+ ++  +T NF Q  VL       VY GF           + VAVK+   + S QG +E+ +EV  L  + H NL  LIGY  E +   LIYEFMA G++ ++L  K    L W  R++IA  AA+GL +LH   + P+++RD KTSNILL+    A L+DFGL++      +SHVST + GT GY  P    T  L  +
Sbjct:  558 LLFTFADVIKMTNNFGQ--VLGKGGFGTVYHGFYDN--------LQVAVKLLS-ETSAQGFKEFRSEVEVLVRVHHVNLTALIGYFHEGDQMGLIYEFMANGNMADHLAGKYQHTLSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEK 750          

HSP 2 Score: 29.6462 bits (65), Expect = 1.463e-29
Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  692 NSQSDVYSFGVVLLEI 739
            N +SD+YSFGVVLLE+
Sbjct:  748 NEKSDIYSFGVVLLEM 763          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.469e-29
Identity = 74/212 (34.91%), Postives = 112/212 (52.83%), Query Frame = 3
Query:   72 DSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSK-VLLPLPWSIRMKIAFGAAKGLAFLHE-AEKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            DS     + F    + I T  F  +  L       VYKG +            +AVK   G  S QG  E+  EV+ L  L H NLVKL+G+C E    +L+YE +   S+++ +F +     L W +R +I  G A+GL +LHE ++  +I+RD K SNILLD + N  ++DFG+A+     +    ++R++GTYGY APEY+  G  + +
Sbjct:  319 DSDGQATLRFDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQE-------IAVKRLAG-GSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAK 522          

HSP 2 Score: 28.8758 bits (63), Expect = 1.469e-29
Identity = 12/19 (63.16%), Postives = 17/19 (89.47%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  +++SDVYSFGV+LLE+
Sbjct:  517 GQFSAKSDVYSFGVMLLEM 535          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29
Identity = 79/199 (39.70%), Postives = 111/199 (55.78%), Query Frame = 3
Query:   99 FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV--LLPLPWSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG 686
            F++ E++  T+NF    +L       VYKG++            VAVK    D  Y G  ++  EV  +G   H NL++L G+C   E R+L+Y +M  GSV + L         L W+ R+ IA GAA+GL +LHE   P +I+RD K +NILLD  + A + DFGLAK   + D SHV+T + GT G+ APEY+ TG
Sbjct:  288 FSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNG-------TVVAVK-RLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRD-SHVTTAVRGTIGHIAPEYLSTG 477          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.469e-29
Identity = 80/199 (40.20%), Postives = 111/199 (55.78%), Query Frame = 3
Query:   87 PLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLF--SKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEY 674
            PL   T+ +L   T  F  D ++       VYK      L++G   V +   +H    S QG RE+ AE+  +G + H NLV L+GYC   E R+L+YE+M  GS+E+ L    K+ + L W  R KIA GAA+GLAFLH    P +I+RD K+SN+LLD +  A +SDFG+A+     D     + + GT GY  PEY
Sbjct:  872 PLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKA----QLKDG-SVVAIKKLIHV---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEY 1062          

HSP 2 Score: 26.1794 bits (56), Expect = 2.469e-29
Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  692 NSQSDVYSFGVVLLEI 739
            +++ DVYS+GVVLLE+
Sbjct: 1069 STKGDVYSYGVVLLEL 1084          
The following BLAST results are available for this feature:
BLAST of CX297498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
BRI1_ARATH5.069e-3039.20Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y2239_ARATH6.866e-3040.00Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH8.610e-3043.23Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
PSKR1_ARATH1.121e-2941.24Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
PSKR1_DAUCA1.460e-2940.63Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
NORK_PEA1.462e-2937.25Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y1570_ARATH1.463e-2939.22Probable LRR receptor-like serine/threonine-protei... [more]
CRK36_ARATH1.469e-2934.91Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y5457_ARATH1.529e-2939.70Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLLC2.469e-2940.20Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]

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Properties
Property NameValue
Genbank descriptionC06002B05SK RindPdig24 Citrus clementina cDNA clone C06002B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297498 ID=CX297498; Name=CX297498; organism=Citrus clementina; type=EST; length=745bp
GAATTCGGCACGAGGAAAAGGAATACGGTAAGTTACCATCAAATCCGGAA
GAAGTAGAGGACCTGCGTCGTGATTCGGCTGCAAATCCATTGATTGCATT
CACGTACGATGAACTGAGAATCATCACTGCAAATTTCAGGCAAGATCGTG
TGTTGGGTGGAGGCGGATTTGGATGTGTTTACAAAGGGTTCATTTCTGAG
GACTTAAGGGAAGGGCTTCAGCCTGTTCCAGTGGCTGTTAAGGTTCATGA
TGGTGATAACAGTTATCAAGGCCACCGGGAATGGCTGGCAGAAGTCATAT
TTTTGGGACACCTTTCTCATCCGAATTTGGTTAAGTTGATCGGTTACTGC
TGTGAAGATGAACACCGGGTACTAATATATGAGTTCATGGCTCGGGGTAG
TGTCGAAAACAATCTTTTCTCAAAAGTACTGCTTCCTCTTCCATGGTCTA
TCAGAATGAAGATTGCATTTGGTGCTGCAAAAGGACTGGCCTTCCTTCAT
GAAGCAGAGAAACCTGTCATCTATCGCGACTTTAAGACATCTAATATTCT
CTTAGATACGGACTACAATGCANAGCTCTCGGACTTTGGCCTTGCCAAAG
ATGGACCAGAGGGGGACAAATCTCACGTTTCAACTCGCATAATGGGAACT
TATGGATATGCAGCCCCTGAGTACATAATGACGGGTCATCTAACTCCCAG
AGTGATGTGTACAGCTTTGGTGTCGTGCTTCTTGAGATCTGACAG
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