CX297531

Overview
NameCX297531
Unique NameCX297531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22
Identity = 61/212 (28.77%), Postives = 99/212 (46.70%), Query Frame = 1
Query:   22 ICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSK----VEANGNDFRYLPFGVGRRSCP 645
            + + +  +R Q  KD     +K    +     + L   +D   D  ++ +I   ++  ++ +   A  +TT  S EW + ELV  P + +K+R E+D V+G    + E D   LPYLQA++KET RL   +P +V    + +  +  Y +P +S + VN W +  NP  W                     V+  G+ F+ LPFG GRR CP
Sbjct:  239 LVERIISKREQTRKDRRRNGKKGEQGSGDGIRDFLDILLDCTEDENSEIKIQRVHIKALIMDFFTAGTDTTAISTEWALVELVKKPSVLQKVREEIDNVVGKDRLVEESDCPNLPYLQAILKETFRLHPPVP-MVTRRCVAECTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCP 449          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22
Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 1
Query:  184 NVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKK-XXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSC 642
            N+  ++ N+  A  +T+   IEW +AEL+ +P I K+ + E+D V+G   +  E D  KLPYLQA+ KE  R   + PL +P +     ++ G+ +P  +++ VN W +  +P+ W+               +K++  GNDF  +PFG GRR C
Sbjct:  294 NIKALLLNMFTAGTDTSSSVIEWALAELLKNPIILKRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRIC 447          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22
Identity = 57/198 (28.79%), Postives = 101/198 (51.01%), Query Frame = 1
Query:   67 YFVEERKKLASTKSMSNES-LKCAIDHILDAQTKG---EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            +F +   +L  TK + + S L  A+  +++   K    +I  D+++ ++ ++ +A +     ++ W + EL  HP + KKL+ E+   LGP  + ITE D  K+ YL  VIKE+ RL    PLL+P   + D ++ GY +P  + + +N + +  +P +W               + +   G  +  LPFG GRR+CP
Sbjct:  247 FFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTN--PEEFNPERFLNTSINYKGQHYELLPFGAGRRNCP 442          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 56/188 (29.79%), Postives = 95/188 (50.53%), Query Frame = 1
Query:   91 LASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLV-PHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEAN--GNDFRYLPFGVGRRSCP 645
            +A  ++   E+ +  +D +L      ++++ +++ ++  +     +T    IEW +A +  HP +Q K++ ELD V+G    + E D   + YL AV+KE LRL    PLL    ++++D  + GY VPA +  +VN W +  +P  WK                 E +  G+D R  PFG GRR+CP
Sbjct:  281 IAEHRASKTETNRDFVDVLLSLPEPDQLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMALHPHVQSKVQEELDAVVGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACP 468          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 60/203 (29.56%), Postives = 102/203 (50.25%), Query Frame = 1
Query:   46 RLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKG--EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            RL  F  + +++  K   ++  S + +   +D I      G  ++  D++  ++ ++ +A +     ++ W + EL  HP + KKL+ E+  +LG   + ITE D  K+ YL+ VI+ET RL    PLL+P   + D K+ GY++P  + I +N + +  +P  W+              S VE  G  +  LPFG GRR CP
Sbjct:  243 RLSNFFQHVIDDHLKPGQSQDHS-DIIGVMLDMINKESKVGSFQVTYDHLKGVMSDVFLAGVNAGAITMIWAMTELARHPRVMKKLQQEIREILGDNKEKITEQDLEKVHYLKLVIEETFRLHPPAPLLLPRETMSDLKIQGYNIPKNTMIEINTYSIGRDPNCWEN--PNDFNPERFIDSPVEYKGQHYELLPFGAGRRICP 442          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 54/150 (36.00%), Postives = 83/150 (55.33%), Query Frame = 1
Query:  196 IVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            I+ +I +A ++T+  +I W +  L+ +P + KK + E+  V+     ITE D   L YL+ V+KETLR+   +PLL P     D K+GGY++P ++ I VN W +  NP  WK              ++++  G +F  LPFG GRR CP
Sbjct:  290 ILLDILLAGVDTSGHTITWVMTHLIKNPRVMKKAQAEVREVIKNKDNITEEDIEGLEYLKMVVKETLRINPLVPLLTPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWK--DPEAFIPERFMDNQIDYKGLNFELLPFGSGRRICP 437          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 50/160 (31.25%), Postives = 84/160 (52.50%), Query Frame = 1
Query:  169 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            ++ +D++  ++ ++ +A +     ++ W + EL  HP + +KL+ E+   LGP  + ITE D  K+ YL+ VI+E  RL    PLL+P + + D  + GY +P  + I +N + +  +P  W K             + +E  G  F  LPFG GRR CP
Sbjct:  283 KVTDDHLKGLMSDVFLAGVNAGSITMIWTMTELSRHPRVMRKLQEEIRAALGPNKEKITEEDLEKVEYLKMVIEEAFRLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTK--PDEFIPERFVDNPIEYKGQHFELLPFGAGRRVCP 440          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 53/159 (33.33%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  169 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            +I+  ++  IV +  V   +T+   +EW + EL+ HP   KKL+ E+ T+      ++E D   + YL+AV+KE LRL   +PL+VPH +  D +L    +PA ++++VN W +    A W               S  +  G DF  +PFG GRR CP
Sbjct:  273 DIDRLSIKAIVLDAFVGGTDTSSTLVEWEMTELLRHPTCLKKLQEEVRTICKGKSSVSEDDIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATW-GPDANEFRPERHLESPSDFRGQDFELIPFGAGRRMCP 430          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 71/218 (32.57%), Postives = 111/218 (50.92%), Query Frame = 1
Query:   19 KICKEVKERRLQLFKDYFVEE---RKKLASTKSMSNESLKCAIDHILDAQTKGE----INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLR-MAIPLLVPHMNLHDAK-LGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            K+ K  KE  L +F +  +EE   RKK    +  S    K  +D +L+ Q   E    +  D++  I+ +   A  +TT  +++W +AEL+  P   K L++E+  +     +ITE D   + YL+AVIKE+LRL      LLVP  ++ D   LG Y +PA ++ ++NAW +  +P  W+              S  +  G +F+ LPFG GRR CP
Sbjct:  238 KVKKVAKE--LDMFLEIVIEEHIIRKK--KEEYTSTGEAKDFVDVLLEIQNGNETDFPLQRDSLKAILLDSFAAGTDTTFATLDWTMAELLRQPRALKTLQDEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPTQESLLVPRESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWEN--PEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCP 449          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21
Identity = 59/216 (27.31%), Postives = 103/216 (47.69%), Query Frame = 1
Query:    4 LRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHIL---DAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSC 642
            L G+ K+      R +  + D FV+ER  L   ++   +  +  +D  +   D   K  ++++ +   V  + +A ++    + EWG+AE++N P I +K   E+D V+G    + E D   L Y++A +KE  RL    P  +PHM+  D  + GY +P  S +L++   +  NP+ W K             + V+ N +D   + F  GRR C
Sbjct:  255 LEGHEKVVSNAM-RNVSKYNDPFVDER--LMQWRNGKMKEPQDFLDMFIIAKDTDGKPTLSDEEIKAQVTELMLATVDNPSNAAEWGMAEMINEPSIMQKAVEEIDRVVGKDRLVIESDLPNLNYVKACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGC 467          
The following BLAST results are available for this feature:
BLAST of CX297531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
C93B1_GLYEC8.312e-2228.77Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C75A5_EUSGR8.312e-2233.12Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BU_ARATH8.312e-2228.79Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C78A3_SOYBN1.086e-2129.79Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C71BM_ARATH1.086e-2129.56Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH1.086e-2136.00Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71B5_ARATH1.086e-2131.25Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AN_ARATH1.086e-2133.33Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME1.086e-2132.57Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C79A2_ARATH1.418e-2127.31Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06002E04SK RindPdig24 Citrus clementina cDNA clone C06002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297531 ID=CX297531; Name=CX297531; organism=Citrus clementina; type=EST; length=712bp
TTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTAAAGAAAGGAGACT
CCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAGAAATTGGCAAGCA
CGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAATCGATCATATTTTG
GACGCTCAGACAAAGGGAGAAATCAACGAGGACAACGTTCTATACATCGT
TGAGAACATCAATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGT
GGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGC
AATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAATCACTGAGCCTGA
CACCCACAAACTACCCTACCTTCAGGCCGTGATCAAGGAAACTCTTCGCC
TTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAACCTTCACGACGCC
AAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAATCCTAGTGAACGC
GTGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCA
GGCCTGAGAGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAAT
GACTTCCGTTACCTTCCTTTCGGTGTTGGGAGAAGAAGCTGCCCTGGATT
ATCCTTGCTTTGCCAATTCTTGGTATCACTATTGGGCGTTTGGTACAGAA
CTTTGAGCTCTT
back to top