CX297531

Overview
NameCX297531
Unique NameCX297531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 69/178 (38.76%), Postives = 102/178 (57.30%), Query Frame = 1
Query:  115 NESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLG-PGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            ++S K  IDH+     KG         I ++I +A I+T+  ++ W +AELVN+P + KK+++E+ + +G    +I E D  KL YL+ VIKETLRL  A PLL+P   + D K+ GYD+P ++ +LV+AW L  +P  WK                V+  G+ F +LPFG GRR CP
Sbjct:  285 DKSFKLTIDHL-----KG---------ITQDIFLAGIDTSAITMIWAMAELVNNPRVMKKVQDEIRSCIGIKKERIEEEDVGKLQYLKLVIKETLRLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKN--PEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCP 446          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 67/217 (30.88%), Postives = 118/217 (54.38%), Query Frame = 1
Query:    4 LRGYLKICKEVKERRLQLFKDYF---VEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            L+G  K  + + ER  ++F+ +    + E+     +K +SN     ++  IL+   + E++ +++ +++ ++  A  +T+  ++EW +AEL+ +P+   K + E+D VLG    + E D   LPYLQAV+KET RL  A PLLVP     D ++ G+ VP ++++LVN W +  +P+ W+                ++  G D+   PFG GRR CP
Sbjct:  238 LQGNRKAMRGLTERLFRVFRGFMDAKIAEKSLGNYSKDVSNRDFLDSL-LILNEGDEAELDNNDIEHLLLDMFTAGTDTSSSTLEWAMAELLRNPKTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWEN--PSQFEPERFMGKDIDVKGRDYELTPFGGGRRICP 451          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.121e-26
Identity = 69/218 (31.65%), Postives = 113/218 (51.83%), Query Frame = 1
Query:    4 LRGYLKICKEVKERRLQLFKDYFVEE--RKKLASTKSMSNESLKCAIDHILDAQT--KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            L+G  K  K   ER  ++F+ +   +   K L  T S      +  +D +LD     + E+N +++++++ ++  A  +T   ++EW +AEL+ +PE   K + E+D V+G    + E D   LPYLQAV+KET RL  A PLLVP     D ++ G+ VP ++++ VN W +  +P  W+                ++  G D+   PFG GRR CP
Sbjct:  238 LQGNRKTLKACSERLFKVFRGFIDAKLAEKSLRDTNSKDVRE-RDFVDVLLDLTEGDEAELNTNDIVHLLLDLFGAGTDTNSSTVEWAMAELLRNPETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWEN--SSRFKPERFLGKDIDLRGRDYELTPFGAGRRICP 452          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26
Identity = 64/193 (33.16%), Postives = 106/193 (54.92%), Query Frame = 1
Query:   76 EERKKLAST--KSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKK-XXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            EER+    T  K    + L    D   D  ++ ++N++N+   + +I +A  +T+  ++EW +AEL+N+P + +K R E+D V+G    + E D   LPYLQ +++ETLRL  A PLL    +   A + GYD+PA++++ VN W +  +P  W+               S+++  G  +  LPFG GRR+CP
Sbjct:  258 EERRNKNETVGKREFKDMLDVLFDISEDESSEIKLNKENIKAFILDILIAGTDTSAVTMEWAMAELINNPGVLEKARQEMDAVVGKSRIVEESDIANLPYLQGIVRETLRLHPAGPLLFRESS-RRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACP 449          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.912e-26
Identity = 70/208 (33.65%), Postives = 109/208 (52.40%), Query Frame = 1
Query:   46 RLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDA------QTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ--ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            R+  F ++ V++     +T+   +      +D ILD           ++  D++  ++ NI  A I+T+  ++ W +AELV +P + KK ++E+ T +G   +  I E D  KL YL+ V+KETLRL  A PLL+P   + D K+ GYD+P +  +LVNAW +  +P  WK                V+  G+ F  LPFG GRR CP
Sbjct:  247 RVDTFFNHIVDDHHSKKATQDRPD-----MVDAILDMIDNEQQYASFKLTVDHLKGVLSNIYHAGIDTSAITLIWAMAELVRNPRVMKKAQDEIRTCIGIKQEGRIMEEDLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKN--PEEFNPERFIDCPVDYKGHSFELLPFGSGRRICP 447          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.259e-26
Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = 1
Query:  169 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            E N  N+  +  ++ VA  +TT  +IEW + EL+  P I  K + EL+ V+G G  + E D  +LPYL  ++KE LRL    PLL+P   +   +L GY +PA + + VNAW +  +P  W               S+++  G+DF  +PFG GRR CP
Sbjct:  277 EFNHTNIKALFLDLFVAGTDTTSITIEWAMTELLRKPHIMSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVW--DDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICP 433          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.259e-26
Identity = 71/193 (36.79%), Postives = 99/193 (51.30%), Query Frame = 1
Query:   79 ERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGH--QITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKK--XXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            E +KL+  K   ++     ID  L    +     DNV  ++ N+  AAIET+   +E  +AEL+NH  + KKL+ E+           I E D   LPYL+A +KE LRL    PLL+PH +  D ++ GY +PA  ++LVN W +  +PA W+K                    +G DFRYLPFG GRR CP
Sbjct:  287 EMRKLSGDKEKESDDF---IDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQAEVRAYGAEKKLDMIREDDLSSLPYLKASMKEALRLHPPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICP 476          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.562e-26
Identity = 61/160 (38.12%), Postives = 91/160 (56.88%), Query Frame = 1
Query:  169 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSK-VEANGNDFRYLPFGVGRRSCP 645
            +   +NV  ++ +I V   +T    + W +  L+ +PE  KK ++E+ +V+G    ++E D   LPYL+AVIKE+LRL   IP+L+    + DAK+GGYD+PA++ I VNAW ++ + A W                K V+  G DF  LPFG GRR CP
Sbjct:  283 KFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRSVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCP 442          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.562e-26
Identity = 67/209 (32.06%), Postives = 113/209 (54.07%), Query Frame = 1
Query:   31 EVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQT----KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            EV ++R   F +  V+E ++         E+    +D +L  Q+    + E+ +  +  I+ ++ +A   TTL  +EW + EL+ +P++ KKL+ E+ +       +TE +  K+ YLQAVIKE LRLR   PLLVP +   D KL GY++PA ++++VNAW +  +   W               + ++  G DF+++PFG G+R CP
Sbjct:  240 EVVDKRFDEFLERVVKEHEEA------DKETRSDLVDKLLTIQSDKTGQFELEKSALKLIIWDMFLAGTATTLSFLEWAMTELMRNPKVMKKLQEEIRSSSPQDLFVTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTW-GTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25
Identity = 64/216 (29.63%), Postives = 111/216 (51.39%), Query Frame = 1
Query:    4 LRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ--ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            L  Y+K C E ++  +Q   +  ++ ++    T+SM    +   +    +     E   DNV  ++ +I VA  +T   ++ WG+  L+ +P++ KK + E+   +       +TE D   LPY +A++KETLR+   IPLL+P   + D K+ GYD+PA + + VNAW ++ +  +W                +V+  G D+ ++PFG GRR CP
Sbjct:  233 LTAYMKECFERQDTYIQEVVNETLDPKRVKPETESM----IDLLMGIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEW-GPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCP 443          
The following BLAST results are available for this feature:
BLAST of CX297531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
C71BP_ARATH5.031e-2738.76Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C76C4_ARATH6.571e-2730.88Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH1.121e-2631.65Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C93A3_SOYBN1.464e-2633.16Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71B4_ARATH1.912e-2633.65Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU4.259e-2636.487-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C71C3_MAIZE4.259e-2636.79Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C83B1_ARATH5.562e-2638.13Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71AK_ARATH5.562e-2632.06Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C83A1_ARATH2.114e-2529.63Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC06002E04SK RindPdig24 Citrus clementina cDNA clone C06002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297531 ID=CX297531; Name=CX297531; organism=Citrus clementina; type=EST; length=712bp
TTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTAAAGAAAGGAGACT
CCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAGAAATTGGCAAGCA
CGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAATCGATCATATTTTG
GACGCTCAGACAAAGGGAGAAATCAACGAGGACAACGTTCTATACATCGT
TGAGAACATCAATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGT
GGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGC
AATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAATCACTGAGCCTGA
CACCCACAAACTACCCTACCTTCAGGCCGTGATCAAGGAAACTCTTCGCC
TTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAACCTTCACGACGCC
AAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAATCCTAGTGAACGC
GTGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCA
GGCCTGAGAGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAAT
GACTTCCGTTACCTTCCTTTCGGTGTTGGGAGAAGAAGCTGCCCTGGATT
ATCCTTGCTTTGCCAATTCTTGGTATCACTATTGGGCGTTTGGTACAGAA
CTTTGAGCTCTT
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