CX297531

Overview
NameCX297531
Unique NameCX297531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: CP4Z1_HUMAN (Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 50/205 (24.39%), Postives = 94/205 (45.85%), Query Frame = 1
Query:   43 RRLQLFKDYFVEERKKLASTKSMSNESLKCA---IDHILDAQTKG--EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSC 642
            + L  F +  +++RK+    K   + + K     +D +L A+++   + +E ++   V+    A  +TT  +I W +  L  +PE Q++ R+E+  +LG G  IT     ++PY    IKE LRL   +  +   ++       G  +PA   + +N W L +NP  W+              S+     + + ++PF  G R+C
Sbjct:  251 QELHQFTEKVIQDRKESLKDKLKQDTTQKRRWDFLDILLSAKSENTKDFSEADLQAEVKTFMFAGHDTTSSAISWILYCLAKYPEHQQRCRDEIRELLGDGSSITWEHLSQMPYTTMCIKECLRLYAPVVNISRLLDKPITFPDGRSLPAGITVFINIWALHHNPYFWEDPQVFNPLRFSRENSE---KIHPYAFIPFSAGLRNC 452          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 44/158 (27.85%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  172 INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSC 642
            ++ +++   V+       +TT  +I W +  L ++PE+QKK+ +ELD V G   +  T  D  KL YL+ VIKETLRL  ++PL    ++  D ++ GY V   ++ ++  + L  +P  +               ++     + + Y+PF  G R+C
Sbjct:  314 LSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVS-EDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQ---GRHPYAYVPFSAGPRNC 467          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: CP4CU_BLAGE (Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 53/196 (27.04%), Postives = 91/196 (46.43%), Query Frame = 1
Query:   76 EERKKLASTKSMSNESLKCA-----IDHILDA-QTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNEL-DTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSC 642
            EERKK   T++  +  +        +D +LDA +   ++ + ++L  V        +T   ++ W + EL +HPEIQ++   E+ D   G     T  D + + YL+ VIKE+LRL  ++   V   +  D +LGGY +PA + I  +  ++  NP  +                    N + + Y+PF  G R+C
Sbjct:  256 EERKKSKVTQTSEDADIGKKKRVPFLDTLLDASEDDNKLTDTDILEEVHTFMFEGHDTVSAAMTWLLFELGHHPEIQEEAYKEVQDIFQGSDRVPTMADLNNMNYLERVIKESLRLHPSVIYFVREAH-QDFELGGYTIPAGTNIDFSVPFIHRNPEIFPNPRCFNPDNFLPDR---VVNRHPYAYIPFSAGPRNC 447          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C519E_DICDI (Probable cytochrome P450 519E1 OS=Dictyostelium discoideum GN=cyp519e1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 52/180 (28.89%), Postives = 81/180 (45.00%), Query Frame = 1
Query:  166 GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPG-HQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHD-AKLGGYDVPAESKILVNAWWLANN----PAQWKKXXXXXXXXXXXXXSKVEA--------------NGNDFRYLPFGVGRRSCP 645
            G   +D V+++  +  +A  +T   ++EW    L N+PEIQKK   EL +V+G     +T       PYL   IKETLR+R   PL +  ++  D    GG  +P  ++I+ N + +  N    P+ +K               ++EA              N  D   LPF +G R+CP
Sbjct:  275 GGKEKDMVIHVSTDFLLAGSDTNASTLEWFCIFLANNPEIQKKAYEELISVVGKDCKAVTTKYRDDCPYLVGAIKETLRMRTPAPLSLIRVSEEDFMTSGGIFIPKGTQIVPNLYGIGQNFVDDPSSYKPERWVEYYKNKTPTREMEATTETKSNITTEILPNDLDKVVLPFSIGPRNCP 454          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 1
Query:  214 VAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKV-EANGNDFRYLPFGVGRRSC 642
            +A  +TT  S+ +    L  HPEIQKKL+ E+D    P  ++T     KL YL+ V+KE LRL     L+     L    + G ++ A + I V+ W L ++P  W                ++  A G    YLPFG+G R C
Sbjct:  325 LAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDREC-PDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESGDELFFAKGG---YLPFGMGPRIC 464          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 56/211 (26.54%), Postives = 98/211 (46.45%), Query Frame = 1
Query:   13 YLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGND-FRYLPFGVGRRSC 642
            + K    +KE RL   + + V+  + + ++ + S +     + H   A +  EI   ++++I      A  ETT  ++ + +  L  HP+IQKKL++E+D  L      T     ++ YL  V+ ETLRL   I   +  +   D +L G  +P  S +++ ++ L ++P  W +             SK      D + YLPFG G R+C
Sbjct:  249 FKKFVDRMKESRLDSKQKHRVDFLQLMMNSHNNSKDK----VSH--KALSDMEITAQSIIFIF-----AGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRL-YPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSE----PEEFQPERFSKENKGSIDPYVYLPFGNGPRNC 443          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: CP2G1_RABIT (Cytochrome P450 2G1 OS=Oryctolagus cuniculus GN=CYP2G1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 41/158 (25.95%), Postives = 71/158 (44.94%), Query Frame = 1
Query:  169 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSC 642
            E N  N++    N+  A  ET   ++ +G   ++ HPE+Q K+  E++ V+GP    +  D  K+P+  AVI E  RL   +P+ VPH  + D    GY +P  + +      +  +P  +                + + N     ++PF  G+R C
Sbjct:  285 EFNLKNLVLTTLNLFFAGTETVSSTLRYGFLLIMKHPEVQTKIYEEINQVIGPHRIPSVDDRVKMPFTDAVIHEIQRLTDIVPMGVPHNVIRDTHFRGYLLPKGTDVFPLLGSVLKDPKYFCHPDDFYPQHFLDEQGRFKKNE---AFVPFSSGKRIC 439          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C4AC1_DROME (Probable cytochrome P450 4ac1 OS=Drosophila melanogaster GN=Cyp4ac1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 45/209 (21.53%), Postives = 95/209 (45.45%), Query Frame = 1
Query:   16 LKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSC 642
            L+I  +   R ++  +  F  ++K+L        +     +D +L A+  G+I+   +   V        +TT   + + +  L  H ++QKK   E++ +      I+    +KL YL+ VIKE+LR+  ++P  +    + +  + G  +P +++I ++ + +  +P  + K             +    N + F Y+PF  G+R+C
Sbjct:  252 LRIVHDFSSRIIERKRQQF--QQKQLGEVDEFGRKQRYAMLDTLLAAEADGQIDHQGICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEVENLPEDSDDISMFQFNKLVYLECVIKESLRMFPSVP-FIGRQCVEETVVNGMVMPKDTQISIHIYDIMRDPRHFPKPDLFQPDRFLPENT---VNRHPFAYVPFSAGQRNC 454          
The following BLAST results are available for this feature:
BLAST of CX297531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
CP4Z1_HUMAN6.601e-1124.39Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2... [more]
CP4V2_HUMAN6.601e-1127.85Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1... [more]
CP4CU_BLAGE6.601e-1127.04Cytochrome P450 4c21 OS=Blattella germanica GN=CYP... [more]
C519E_DICDI6.601e-1128.89Probable cytochrome P450 519E1 OS=Dictyostelium di... [more]
C13A7_CAEEL6.601e-1132.64Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
CP3AB_MOUSE8.621e-1126.54Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
CP2G1_RABIT8.621e-1125.95Cytochrome P450 2G1 OS=Oryctolagus cuniculus GN=CY... [more]
C4AC1_DROME8.621e-1121.53Probable cytochrome P450 4ac1 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionC06002E04SK RindPdig24 Citrus clementina cDNA clone C06002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297531 ID=CX297531; Name=CX297531; organism=Citrus clementina; type=EST; length=712bp
TTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTAAAGAAAGGAGACT
CCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAGAAATTGGCAAGCA
CGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAATCGATCATATTTTG
GACGCTCAGACAAAGGGAGAAATCAACGAGGACAACGTTCTATACATCGT
TGAGAACATCAATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGT
GGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGC
AATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAATCACTGAGCCTGA
CACCCACAAACTACCCTACCTTCAGGCCGTGATCAAGGAAACTCTTCGCC
TTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAACCTTCACGACGCC
AAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAATCCTAGTGAACGC
GTGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCA
GGCCTGAGAGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAAT
GACTTCCGTTACCTTCCTTTCGGTGTTGGGAGAAGAAGCTGCCCTGGATT
ATCCTTGCTTTGCCAATTCTTGGTATCACTATTGGGCGTTTGGTACAGAA
CTTTGAGCTCTT
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