CX297531

Overview
NameCX297531
Unique NameCX297531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25
Identity = 69/213 (32.39%), Postives = 110/213 (51.64%), Query Frame = 1
Query:   19 KICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGE---INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLG-PGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            KI K  KE  L  F  + +++  K    K   N+ +   I  ++D Q   +   +N DN+  IV ++ +A I+T+  ++ W + EL+ +P + KK +  + T LG    +ITE D  K+ YL  ++KET RL  A+P +VP   +   K+ GYD+P +++I +N W +  +P +W               S V+  G  F  LPFG GRR CP
Sbjct:  240 KINKVFKE--LDAFYQHVIDDHLKPEGRK---NQDIVTLILDMIDKQEDSDSFKLNMDNLKAIVMDVFLAGIDTSAVTMIWAMTELIRNPRVMKKAQESIRTTLGLKKERITEEDLGKVEYLNHILKETFRLHPALPFVVPRETMSHIKIQGYDIPPKTQIQLNVWTIGRDPKRWN--DPEEFNPERFANSSVDFRGQHFDLLPFGSGRRICP 445          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25
Identity = 62/194 (31.96%), Postives = 109/194 (56.19%), Query Frame = 1
Query:   76 EER---KKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKK-XXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            EER   K++  T+    + L   +D   D  ++ ++ ++N+   + +I VA  +T+  ++EW +AEL+N+P + +K R E+D V+G    I E D   LPYLQA+++ETLR+    PL+V   +     + GY++PA++++ VN W +  +P  W+               S+++  G  + ++PFG GRRSCP
Sbjct:  250 EERRNNKEIGGTRQFK-DILDVLLDIGEDDSSEIKLTKENIKAFIMDIFVAGTDTSAATMEWAMAELINNPCVLEKARQEIDAVVGNSRIIEESDIVNLPYLQAIVRETLRIHPGGPLIVRESS-KSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25
Identity = 66/187 (35.29%), Postives = 98/187 (52.41%), Query Frame = 1
Query:   91 LASTKSMSNESLKCAIDHILDAQTKG-EINEDNVLY-IVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            L   K    E+    IDH+L  Q    E   D ++  I+  + +A   T+  ++EW ++ L+NHP++  K R+E+D  +G    I E D  +LPYL+ ++ ETLRL  A PLLVPHM   D K+G YD+P  + +LVNAW +  +P  W                + E      + L FG+GRR+CP
Sbjct:  262 LIDDKRGQQETGTTMIDHLLVLQKSDIEYYTDQIIKGIILIMVIAGTNTSAVTLEWALSNLLNHPDVISKARDEIDNRVGLDRLIEEADLSELPYLKNIVLETLRLHPATPLLVPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTW-------DDPDSFKPERFEKEEEAQKLLAFGLGRRACP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25
Identity = 68/229 (29.69%), Postives = 113/229 (49.34%), Query Frame = 1
Query:    4 LRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDA--------QTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANG-------NDFRYLPFGVGRRSCP 645
            L+G  +  K+   R    F +  ++E    AST         C +  I+D          T  ++  + +  I   +  A +ET+   +EW ++EL+ HP   KKL+ E+++V+G    + E D   + YL  V+KETLRL  ++PL +PH +L    +GGY +P ++ +++N W +  +P+ W                ++E NG       +DFR LPFG GRR+CP
Sbjct:  243 LQGIKRALKKANAR-FDAFAEKMIDEHIN-ASTIRNGEADAGCHVKDIIDVLLEMAKNDNTGAKVTREIIKAITYELFSAGMETSANVLEWAMSELLRHPHAMKKLQQEIESVVGQQGTVKESDLASIVYLHCVVKETLRLYPSLPLALPHESLEAVTVGGYYIPKKTMVIMNLWAIGRDPSVW---GADASEFKPERFMQMEENGIDLSGGQSDFRMLPFGAGRRTCP 466          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.605e-25
Identity = 57/159 (35.85%), Postives = 88/159 (55.35%), Query Frame = 1
Query:  169 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            EIN  ++  IV N+ V   +T+   +EW + EL+ HP+  K+L+ E+ T+      ++E +   + YL+AVIKE LRL   +PL+VPH +  D +LG + +PA +++L+NAW +    A W               S V+  G  F  +PFG GRR CP
Sbjct:  275 EINRVSIKAIVMNVFVGGTDTSSTLMEWAMTELLRHPKCLKRLQEEVRTICKDKSSVSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATW-GPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICP 432          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.709e-25
Identity = 61/178 (34.27%), Postives = 100/178 (56.18%), Query Frame = 1
Query:  118 ESLKCAIDHILDAQ-TKGEINEDNVLY-IVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            E     IDH+L+ Q ++ E   D ++  +   + +A  +++  ++EW ++ L+NHPE+ KK+++ELDT +G    + E D  KL YL+ VI ETLRL    PLL+PH    +  +GGY VP ++ +L+NAW +  +P  W +              + E  G   + + FG+GRR+CP
Sbjct:  267 ERANTMIDHLLNLQDSQPEYYTDQIIKGLALAMLLAGTDSSAVTLEWSMSNLLNHPEVLKKVKDELDTHVGQDRLVDESDLPKLTYLKNVINETLRLYTPAPLLLPHSTSDECNIGGYKVPQDTIVLINAWAIHRDPELWTE-------ATTFKPERFEKKGELEKLIAFGMGRRACP 437          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.150e-25
Identity = 68/189 (35.98%), Postives = 99/189 (52.38%), Query Frame = 1
Query:   79 ERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            + +KLA  K    +S    +D  LD+     +N+  +  ++  +  A  ET+  +IEW + EL  +P+I  KLR+EL TV+G    + E D   LPYL+A +KETLRL    PLL+P   L    +  Y +P + +I+VNAW +  +P  W               S V+  GNDF  +PFG GRR CP
Sbjct:  251 QERKLAK-KVDGYQSKNDFVDVCLDSG----LNDYQINALLMELFGAGTETSASTIEWAMTELTKNPKITAKLRSELQTVVGE-RSVKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTW--IDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICP 431          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.032e-25
Identity = 68/182 (37.36%), Postives = 95/182 (52.20%), Query Frame = 1
Query:  103 KSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            K   ++SL+  IDHI     KG         ++ NI +A I+T   ++ W + EL  +PEI KK++ E+   LG   + IT+ D  K+P+L  VIKET RL    PLL+P   +   K+ GYD+P + +ILVNAW +  +P  W               S V+  G  F  LPFG GRR CP
Sbjct:  280 KQGKDDSLRLTIDHI-----KG---------LLTNIIIAGIDTGALTMIWTMTELARNPEIMKKVQGEIRDRLGNNRERITKEDLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLW--TDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICP 445          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.049e-24
Identity = 56/175 (32.00%), Postives = 100/175 (57.14%), Query Frame = 1
Query:  136 IDHILDAQTKGE-----INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            +D +L  Q + E     +++  +  ++ ++ +A  +TT+ ++EW ++EL+ +P   K L+ E+  V G   +I E D  K+PYL+AV+KE+LRL   +PLLVP  +  D K+ GYDV + +++L+N W +  + + W++             + ++  G  F  +PFG GRR CP
Sbjct:  279 VDLLLQFQRENERSSSPVDDLTIKAVILDMFLAGTDTTVTALEWALSELIKNPRAMKILQKEVRGVAGSKGEIEESDLEKMPYLKAVMKESLRLHAPVPLLVPRESTRDTKVLGYDVASGTRVLINCWAIGRDSSVWEE--SETFLPERFLETSIDYRGMHFELIPFGSGRRGCP 451          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.789e-24
Identity = 63/201 (31.34%), Postives = 103/201 (51.24%), Query Frame = 1
Query:   55 LFKDYFVEERKKLASTKS---MSNESLKCAIDHIL-DAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            + +D   E +K LA+ KS   +  E L  A+  ++ D   +  IN DN+  ++ ++  A  ET+  +  W +AE++ +P +  K + ++           E D  +L YL+ VIKET+RL   +PLLVP     + ++ GY +P ++K++VN W L  +P  W                 ++  GN+F YLPFG GRR CP
Sbjct:  244 IVEDVIKEHKKNLATRKSDDAIGGEDLVDALVRLMNDKSLQFPINNDNIKAVIIDLFAAGTETSSTTTVWAMAEMLKNPSVFAKAQAKVREAFRDKVTFDENDVEELKYLKLVIKETMRLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYW--DDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICP 442          
The following BLAST results are available for this feature:
BLAST of CX297531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
C71B2_ARATH2.114e-2532.39Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C93A2_SOYBN2.761e-2531.96Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C81D1_ARATH2.761e-2535.29Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C75A1_PINTA2.761e-2529.69Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71AQ_ARATH3.605e-2535.85Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C81E1_GLYEC4.709e-2534.27Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C80B2_ESCCA6.150e-2535.98(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71BH_ARATH8.032e-2537.36Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71A6_NEPRA1.049e-2432.00Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71D7_SOLCH1.789e-2431.34Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC06002E04SK RindPdig24 Citrus clementina cDNA clone C06002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297531 ID=CX297531; Name=CX297531; organism=Citrus clementina; type=EST; length=712bp
TTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTAAAGAAAGGAGACT
CCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAGAAATTGGCAAGCA
CGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAATCGATCATATTTTG
GACGCTCAGACAAAGGGAGAAATCAACGAGGACAACGTTCTATACATCGT
TGAGAACATCAATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGT
GGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGC
AATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAATCACTGAGCCTGA
CACCCACAAACTACCCTACCTTCAGGCCGTGATCAAGGAAACTCTTCGCC
TTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAACCTTCACGACGCC
AAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAATCCTAGTGAACGC
GTGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCA
GGCCTGAGAGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAAT
GACTTCCGTTACCTTCCTTTCGGTGTTGGGAGAAGAAGCTGCCCTGGATT
ATCCTTGCTTTGCCAATTCTTGGTATCACTATTGGGCGTTTGGTACAGAA
CTTTGAGCTCTT
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