CX297531

Overview
NameCX297531
Unique NameCX297531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22
Identity = 54/160 (33.75%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  166 GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            G++  +++  I+ NI +  I+T+  ++ W +AEL  +P + KK++ E+   +    +I+  DT KL YL+ VIKET RL    PLL+P   + + ++ GY +PA++++ VN W +  +P  WK              S ++A G +F  L FG GRR CP
Sbjct:  284 GKLTRNHIKAILMNILLGGIDTSAITMTWAMAELAKNPRVMKKVQAEIRNQIKNKERISFDDTDKLEYLKMVIKETWRLHPPTPLLLPRDVITEFEINGYTIPAKTRLHVNVWAIGRDPDTWK--DPEMFLPERFNDSNIDAKGQNFELLSFGSGRRICP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22
Identity = 65/218 (29.82%), Postives = 112/218 (51.38%), Query Frame = 1
Query:   13 YLKICKEVKERRLQLFKDY--FVEERKKLASTKSMSNESLKCAIDHILDAQTKGE---INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGP-GHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGN-DFRYLPFGVGRRSCP 645
            +L+I ++ ++  L L +     VEERK+  S +    + ++  +D +LD +   E   +NE++++ +      A  +TT  +++W +A LV +PEIQ++L  E+ +V+G    ++ E D  K+PYL+AV+ E LR       L+PH    D  LGGY VP    I      +  +P +W++               V+  G+   + +PFG GRR CP
Sbjct:  235 FLQIRRQQRDVLLPLIRARRKIVEERKR--SEQEDKKDYVQSYVDTLLDLELPEENRKLNEEDIMNLCSEFLTAGTDTTATALQWIMANLVKYPEIQERLHEEIKSVVGEEAKEVEEEDVEKMPYLKAVVLEGLRRHPPGHFLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICP 450          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22
Identity = 51/160 (31.87%), Postives = 88/160 (55.00%), Query Frame = 1
Query:  166 GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            G++  +++  ++ N+ +  I T+  ++ W + EL+ +P + KK+++E+   +G    I   D  +L YL+ VI ET RL    PLLVP   + + ++ GY +PA++++ VN W +  +P  WK              S ++A G +F  LPFG GRR CP
Sbjct:  284 GKLTRNHIKAVLMNVLLGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGGKSMICLDDIDQLHYLKMVINETWRLHPPAPLLVPREVMSEFEINGYTIPAKTRLYVNVWGIGRDPDTWK--DPEEFLPERFVNSNIDAKGQNFELLPFGSGRRMCP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22
Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = 1
Query:  136 IDHILDAQTKG------EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            ID +LD   K       E+  D++   + NI +A I+T   ++ W + ELV +P++ KK++ ++   LG   + ITE D  K+PYL+ VIKET RL  A PL++P   +   K+ GYD+P + +ILVN   +  +P  W               S V+  G  +  LPFG GRR CP
Sbjct:  271 IDSMLDVIHKQGEDSSLELTIDHIKGFLANIFLAGIDTGAITMIWAVTELVKNPKLIKKVQGDIREQLGSNKERITEEDIEKVPYLKMVIKETFRLHPAAPLILPRETMAHIKVQGYDIPPKRRILVNVSAIGRDPKLWTN--PKEFDPERFMDSFVDYRGQHYELLPFGSGRRICP 445          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22
Identity = 52/175 (29.71%), Postives = 98/175 (56.00%), Query Frame = 1
Query:  136 IDHILDAQTKGEIN----EDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGP-GHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            +D +L  +++  I      D++ +++ ++ +    T+   +EW + EL+ +P + KKL++E+ + + P G  I E D   + YL+AVIKE  R+   +PL++P +   D K+ GY++ A +++++NAW +  +PA W               S ++ +G D  ++PFG GRR CP
Sbjct:  267 VDILLSIESEKSIGFQAQRDDIKFMILDMFIGGTSTSSTLLEWIMTELIRNPNVMKKLQDEIRSTIRPHGSYIKEKDVENMKYLKAVIKEVFRVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIW-GPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICP 440          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22
Identity = 53/160 (33.12%), Postives = 87/160 (54.37%), Query Frame = 1
Query:  169 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            ++  D++  ++ +I +A +     ++ W + EL  HP + KKL+ E+  +LGP  + ITE D  K+ YL+ V+ ET RL    PLL+P + + D K+ GY++P  + I +N + +  +P  WK+             S ++  G  F  LPFG GRR CP
Sbjct:  285 KVTYDHLKGVMSDIFLAGVNGGANTMIWTLTELSRHPRVMKKLQEEIRAMLGPNKERITEEDLEKVEYLKLVMVETFRLHPPAPLLLPRLTMSDIKIQGYNIPKNTMIQINTYAIGRDPKYWKQ--PGEFIPERFLDSPIDYKGQHFELLPFGAGRRICP 442          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22
Identity = 50/159 (31.45%), Postives = 91/159 (57.23%), Query Frame = 1
Query:  169 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            ++  +++  I+ ++ +A ++T+  ++ W +AEL  +P + KK+++E+ + +    +I+  DT KL YL+ VIKET RL    PLL+P   + + ++ GY +P ++++ VN W +  +P  WK              + ++A G  F  LPFG GRR CP
Sbjct:  285 KLTRNHIKAILMDVLLAGMDTSAITMTWAMAELAKNPRVMKKVQSEIRSQIKNKERISFDDTDKLEYLKMVIKETWRLHPTTPLLIPREAMSEFEINGYTIPVKTRLHVNVWAIGRDPDTWK--DPEVFLPERFTDNNIDAKGQHFELLPFGGGRRMCP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22
Identity = 62/186 (33.33%), Postives = 96/186 (51.61%), Query Frame = 1
Query:  109 MSNESLKCAIDHILDAQTKGE-------INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            + +E +K  I  +L    +GE       +  D+   I+ NI  A I+T+   + W +  L+++P + KK + E+  V+     I E D  +L YL+ VIKET R+   +PLL+P     D K+GGY++P ++ I VN W +  NP  WK              S+++  G +F  LPFG GRR CP
Sbjct:  254 LEDEIIKDDIIDLLLKMERGETTLGEFQLTRDHTKGILANILNAGIDTSAQVMTWVMTYLISNPRVLKKAQAEVREVIKHKDDIIEEDIERLQYLKMVIKETFRINPLVPLLIPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWK--DPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICP 437          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22
Identity = 57/164 (34.76%), Postives = 90/164 (54.88%), Query Frame = 1
Query:  169 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDT-----VLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            +I   ++ +++ ++ +A  ETT   +EW + EL+ HPE  KKL++E+       +L     I+E D   + YL+AV+KE LRL   +PLLVP     D KL GYD+ A +++++NAW +  +   W               S V+  G +F ++PFG GRR CP
Sbjct:  283 QIRRSDIKFLILDMFLAGTETTYALLEWIMTELIRHPECMKKLQDEIRAKATKLIL----YISEEDVEDMKYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRDTMTW-GIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.857e-22
Identity = 56/167 (33.53%), Postives = 85/167 (50.90%), Query Frame = 1
Query:  145 ILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            +LD     + NE  +  +         +T    IEW +A+L+ +P+   KLR ELD V+G    + E    +LPYLQA +KET+RL   I +++PH  +   ++ GY +P    + VNA  +  +P  WK              S +E NG  F+++PFG GRR CP
Sbjct:  266 MLDVLIANDFNEHQINAMFMETFGPGSDTNSNIIEWALAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWK--DPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICP 430          
The following BLAST results are available for this feature:
BLAST of CX297531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
C71BQ_ARATH1.282e-2233.75Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C89A2_ARATH1.675e-2229.82Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
C71BY_ARATH1.675e-2231.88Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH1.675e-2235.59Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.675e-2229.71Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71BZ_ARATH2.187e-2233.13Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH2.187e-2231.45Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH2.187e-2233.33Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH2.187e-2234.76Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST2.857e-2233.53Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC06002E04SK RindPdig24 Citrus clementina cDNA clone C06002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297531 ID=CX297531; Name=CX297531; organism=Citrus clementina; type=EST; length=712bp
TTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTAAAGAAAGGAGACT
CCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAGAAATTGGCAAGCA
CGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAATCGATCATATTTTG
GACGCTCAGACAAAGGGAGAAATCAACGAGGACAACGTTCTATACATCGT
TGAGAACATCAATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGT
GGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGC
AATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAATCACTGAGCCTGA
CACCCACAAACTACCCTACCTTCAGGCCGTGATCAAGGAAACTCTTCGCC
TTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAACCTTCACGACGCC
AAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAATCCTAGTGAACGC
GTGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCA
GGCCTGAGAGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAAT
GACTTCCGTTACCTTCCTTTCGGTGTTGGGAGAAGAAGCTGCCCTGGATT
ATCCTTGCTTTGCCAATTCTTGGTATCACTATTGGGCGTTTGGTACAGAA
CTTTGAGCTCTT
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