CX297532

Overview
NameCX297532
Unique NameCX297532
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX297532 vs. ExPASy Swiss-Prot
Match: WNK2_ORYSJ (Probable serine/threonine-protein kinase WNK2 OS=Oryza sativa subsp. japonica GN=WNK2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13
Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 2 
Query:   95 DTIFLKVQITDKDGQARNIYFPFDIFNDTATEVALEMVKELEITDWEPLEIAEMIEQEISSLVPNW 292
            +TIFLK++I D  G A+NI+FPFDI  DT+  VA EMV +L++TD +   IAEMI+ EI + +P+W
Sbjct:  368 NTIFLKLRIADSTGHAQNIHFPFDIEADTSISVATEMVVQLDLTDQDVTAIAEMIDAEIRAHIPDW 433
The following BLAST results are available for this feature:
BLAST of CX297532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
WNK2_ORYSJ6.334e-1353.03Probable serine/threonine-protein kinase WNK2 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionC06002E05SK RindPdig24 Citrus clementina cDNA clone C06002E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297532 ID=CX297532; Name=CX297532; organism=Citrus clementina; type=EST; length=671bp
GAATTCGGCACGAGGAGTGCCAAAGTTTGCGGTTGATTCTGATCGAAGGA
AGAGTACTGATATGACCATAACAGGCACAATGAATCCTGAAGATGATACA
ATTTTCCTGAAAGTACAGATTACAGACAAAGATGGTCAAGCTAGAAACAT
ATACTTCCCCTTTGACATTTTCAATGATACTGCAACTGAAGTTGCCTTGG
AGATGGTGAAAGAATTGGAGATTACTGATTGGGAACCACTTGAAATTGCT
GAAATGATAGAGCAAGAAATATCTTCTTTGGTCCCGAATTGGAAGGAATG
TGGCTCTCCTCAATTCTGTCATCAACACAGCTTTAGCTATGAAGATGAAG
ATGATGACAATGACGACGATGGAATCTACCACCCTTTCTACTCTAACTCT
TCCCATTCCTCGTCGCACGCTTCTCTCCCAGCTTTCTTCACAAACAATGC
GAATTCTCCTCCCAGTTGGCTTCAACAAGAAGACTTGTTGGGCAATGATG
ATGCGAGTTCCAATGGTTCTGTTAGTTCTTTCAAGTACTCAAGCTGGGAT
TACCACTCAGGCAATGAAGATGATTCTGAGTTCAGCCACAGAGCAGGAGA
GCCACTCTGCATTGCAAGGGCAACTCAAAAATCTACAAGATTCTGCCCTG
AAGCTGCTATGAACAATGACC
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