CX297568

Overview
NameCX297568
Unique NameCX297568
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX297568 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 96.6709 bits (239), Expect = 1.153e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = -1 
Query:  418 IKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 642
            +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP +  ++ +Q+VA+ RKRKGLKE +  L  F DKL
Sbjct:  784 VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
[Close]
BLAST of CX297568 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.153e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = -1 
Query:  418 IKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 642
            +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP +  ++ +Q+VA+ RKRKGLKE +  L  F DKL
Sbjct:  784 VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
[Close]
BLAST of CX297568 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.153e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = -1 
Query:  418 IKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 642
            +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP +  ++ +Q+VA+ RKRKGLKE +  L  F DKL
Sbjct:  784 VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
[Close]
BLAST of CX297568 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.153e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = -1 
Query:  418 IKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 642
            +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP +  ++ +Q+VA+ RKRKGLKE +  L  F DKL
Sbjct:  784 VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
[Close]
BLAST of CX297568 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 96.6709 bits (239), Expect = 1.153e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = -1 
Query:  418 IKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 642
            +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP +  ++ +Q+VA+ RKRKGLKE +  L  F DKL
Sbjct:  784 VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
[Close]
BLAST of CX297568 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.506e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = -1 
Query:  418 IKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 642
            +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + SDPL+P ++A ++V   RKR G+KE++    E+ DKL
Sbjct:  768 VKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWSTLGSDPLDPTSKAGEIVLAARKRHGMKEEVPGWQEYYDKL 842
[Close]
BLAST of CX297568 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.506e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = -1 
Query:  418 IKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 642
            +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P T+A ++V   RKR G+KE++    E+ DKL
Sbjct:  768 VKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPTTKAGEIVTAARKRHGMKEEVPGWQEYYDKL 842
[Close]
BLAST of CX297568 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.506e-19
Identity = 44/75 (58.67%), Postives = 57/75 (76.00%), Query Frame = -1 
Query:  418 IKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 642
            +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  ++SDPL+P ++A ++V   RKR G+KE++    E+ DKL
Sbjct:  768 VKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLNSDPLDPTSKAGEIVTAARKRHGMKEEVPGWQEYYDKL 842
[Close]
BLAST of CX297568 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = -1 
Query:  418 IKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 642
            +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP +  ++ +Q+VA+ RKRKGLKE +  L  F DKL
Sbjct:  784 VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNTSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
[Close]
BLAST of CX297568 vs. ExPASy Swiss-Prot
Match: EF2_BOVIN (Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = -1 
Query:  418 IKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 642
            +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP +  ++ +Q+VA+ RKRKGLKE +  L  F DKL
Sbjct:  784 VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNTSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
The following BLAST results are available for this feature:
BLAST of CX297568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
EF2_RAT1.153e-1958.67Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_PONAB1.153e-1958.67Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_MOUSE1.153e-1958.67Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_MESAU1.153e-1958.67Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]
EF2_HUMAN1.153e-1958.67Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_YEAST1.506e-1958.67Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_SACKL1.506e-1958.67Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_CANGA1.506e-1958.67Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_CALJA1.967e-1958.67Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]
EF2_BOVIN1.967e-1958.67Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC06002H07SK RindPdig24 Citrus clementina cDNA clone C06002H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297568 ID=CX297568; Name=CX297568; organism=Citrus clementina; type=EST; length=654bp
AGGAATTCGGCACGAGGTAGGTCTCGAGTTTTTTTTTTTTTTTTTTGAAC
AAGAAAAATATCATAATAATAATAATAATATATCAACCAACGTCGGCCAG
AATTAGTTTAAACACATGACAGAACATCAAACCTTAAAAGCTGTGAATTG
TAAAATTTAAAACCTAGATGACAGAGACAGGGTTACTAAACCCAATCAAC
AGTAATATTACTTTACTAAACACAATGAGGATATTGAAAAACTTTGAAAC
AAAAATAAGCATCAGCAAAAAATATTGCTGCGCAATCTCACCCTTGATGT
CAAGATGAAATGTTTACAGCTCGTCCTCTACTCGGATAGCGGTGTCATTT
GCTCCCTCTTCCTGATATCAGCAACAAGCTGCGCAATCTCACCCTTGATG
TCAAGACGAAATGTTTACAGCTTGTCCTCAAACTCAGATAGTGGTGTCAT
TTGCTCCTTCAAGCCCTTCCTCTTCCTGATATCAGCAACAAGCTGTGCAG
CCTGTGTACCAGGCTCCAGTGGATCGGATGACATCATGTCCCAGTGATCA
AACACACATTGTGGGAAGGCCTGTCCTGACGTTGCAGCCCTCAAAGTGCC
TGAGAATCCAAAGGACTCGATGACGGGAAGGTAAGCCTTGATCCTCGTGC
CGAA
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