CX297689

Overview
NameCX297689
Unique NameCX297689
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length763
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433G_CHICK (14-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.172e-42
Identity = 85/130 (65.38%), Postives = 96/130 (73.85%), Query Frame = 3 
Query:   24 SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGG 413
            S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD  ++ G
Sbjct:  113 SETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 242
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.172e-42
Identity = 84/132 (63.64%), Postives = 100/132 (75.76%), Query Frame = 3 
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEE 407
            NL+P +++ ES VF+ KM+GDYYRY AEF   + RKE AD SL           +EL PTHPIRLGLALNFSVFY+EI+N  ++AC LAKQAFD+AIA+LD + E  YKDSTLIMQLLRDNLTLWTSD  +E
Sbjct:  107 NLLPKASTSESKVFFKKMEGDYYRYFAEFTVDEKRKEVADKSLAAYTEATEISNAELAPTHPIRLGLALNFSVFYFEIMNDADKACQLAKQAFDDAIAKLDEVPENMYKDSTLIMQLLRDNLTLWTSDACDE 238
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 143G1_ONCMY (14-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.067e-41
Identity = 87/132 (65.91%), Postives = 98/132 (74.24%), Query Frame = 3 
Query:   24 SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL-PEEGGE 416
            + T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   +EGGE
Sbjct:  113 NETQHESKVFYLKMKGDYYRYLAEVATGEKRVGVVESSEKSYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQZDDEGGE 244
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433G_BOVIN (14-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.067e-41
Identity = 85/130 (65.38%), Postives = 96/130 (73.85%), Query Frame = 3 
Query:   24 SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGG 413
            S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD  ++ G
Sbjct:  113 SETQIESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 242
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433F_HUMAN (14-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 SV=4)

HSP 1 Score: 166.007 bits (419), Expect = 2.013e-40
Identity = 85/127 (66.93%), Postives = 95/127 (74.80%), Query Frame = 3 
Query:   39 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 416
            ES VFY KMKGDYYRYLAE    + +    + S             ++ PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   EE GE
Sbjct:  118 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433F_RAT (14-3-3 protein eta OS=Rattus norvegicus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.433e-40
Identity = 85/127 (66.93%), Postives = 94/127 (74.02%), Query Frame = 3 
Query:   39 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 416
            ES VFY KMKGDYYRYLAE    + +    + S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   EE GE
Sbjct:  118 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433F_MOUSE (14-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.433e-40
Identity = 85/127 (66.93%), Postives = 94/127 (74.02%), Query Frame = 3 
Query:   39 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 416
            ES VFY KMKGDYYRYLAE    + +    + S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   EE GE
Sbjct:  118 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433F_BOVIN (14-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.433e-40
Identity = 85/127 (66.93%), Postives = 94/127 (74.02%), Query Frame = 3 
Query:   39 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 416
            ES VFY KMKGDYYRYLAE    + +    + S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   EE GE
Sbjct:  118 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433S_SHEEP (14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.648e-40
Identity = 85/136 (62.50%), Postives = 98/136 (72.06%), Query Frame = 3 
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 416
            +LI  +   ES VFY KMKGDYYRYLAE    DD+K   D +             E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +L+E+SYKDSTLIMQLLRDNLTLWT+D   EEGGE
Sbjct:  106 HLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGE 241
[Close]
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433S_MOUSE (14-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.648e-40
Identity = 85/136 (62.50%), Postives = 98/136 (72.06%), Query Frame = 3 
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 416
            +LI  +   ES VFY KMKGDYYRYLAE    DD+K   D +             E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +L+E+SYKDSTLIMQLLRDNLTLWT+D   EEGGE
Sbjct:  106 HLIKGAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADSAGEEGGE 241
The following BLAST results are available for this feature:
BLAST of CX297689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433G_CHICK8.172e-4265.3814-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=... [more]
14331_ENTHI8.172e-4263.6414-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=... [more]
143G1_ONCMY1.067e-4165.9114-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2... [more]
1433G_BOVIN1.067e-4165.3814-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 S... [more]
1433F_HUMAN2.013e-4066.9314-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 S... [more]
1433F_RAT3.433e-4066.9314-3-3 protein eta OS=Rattus norvegicus GN=Ywhah P... [more]
1433F_MOUSE3.433e-4066.9314-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 S... [more]
1433F_BOVIN3.433e-4066.9314-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=... [more]
1433S_SHEEP7.648e-4062.5014-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=... [more]
1433S_MOUSE7.648e-4062.5014-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06004B11SK RindPdig24 Citrus clementina cDNA clone C06004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297689 ID=CX297689; Name=CX297689; organism=Citrus clementina; type=EST; length=763bp
GAGGTTGATGAAACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTG
TTTTACTATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAA
AGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACG
AGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATC
AGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAA
CTCACCTGAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCGA
TTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTT
ATTATGCAGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACC
GGAGGAGGGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCT
AGCCGGGGATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCT
AATATCTATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGT
ATAATACTTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGT
TTACAAAAAAAAAAGGCCGCTCTTTGTGCTGCAGCTAGAGTATATAAATT
CTGAAAGAGAGTAAGCGACTAAGCGCTATAGAAAAGGACAAAAGAGAGAG
AGGCTGGAGAAATGGCTACTTGCTTGTGGATTCATCCGCATCAGCATCAG
CCTCAGCATCATC
back to top