CX297751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33_TETTH (Histone H3.3 OS=Tetrahymena thermophila GN=HHT3 PE=1 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 2.285e-55 Identity = 106/133 (79.70%), Postives = 123/133 (92.48%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTG KAPRKQLA+KAARK+AP +GGVKKPH+++PGTVALREIR+YQK+T+LLIRKLPFQRLVR+IA + KSD+RFQS AI ALQE+ EAYLV LFEDTNLCAIHA+RVTI +KD+ LARR+RG Sbjct: 1 MARTKQTARKSTGVKAPRKQLATKAARKSAPVSGGVKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKSDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDLHLARRIRG 133
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3L_CAIMO (Histone H3-like OS=Cairina moschata PE=3 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 3.897e-55 Identity = 110/133 (82.71%), Postives = 119/133 (89.47%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTA KSTG KAPRKQLA+KAA K+AP+ GGVKKPH Y+PGTVAL EI RYQKSTELLI KLPFQRLVREIAQDFK+DLRFQSSA+ ALQE+ EAYLV LFEDTNLCAIHAKRV+I KDIQL RR+RG Sbjct: 1 MARTKQTACKSTGRKAPRKQLATKAAHKSAPAMGGVKKPHCYRPGTVALHEIHRYQKSTELLICKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVSIMPKDIQLTRRIRG 133
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H34_TETTH (Histone H3.4 OS=Tetrahymena thermophila GN=HHT4 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.934e-54 Identity = 104/133 (78.20%), Postives = 122/133 (91.73%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKST KAPRKQLA+KAARK+AP +GG+KKPH+++PGTVALREIR+YQK+T+LLIRKLPFQRLVR+IA + KSD+RFQS AI ALQE+ EAYLV LFEDTNLCAIHA+RVTI +KD+ LARR+RG Sbjct: 1 MARTKQTARKSTSIKAPRKQLAAKAARKSAPISGGIKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKSDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDLHLARRIRG 133
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33A_DICDI (Histone H3.3 type a OS=Dictyostelium discoideum GN=H3a PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 4.308e-54 Identity = 108/136 (79.41%), Postives = 119/136 (87.50%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAP---STGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTG K PRK + SK A K P S+GGVKK HR++PGTVALREIR+YQKST+LLIRKLPFQRLVREIAQ+FK+DLRFQS+AIGALQE+ EAYLV LFEDTNLCAIHAKRVTI KDI LARR+RG Sbjct: 1 MARTKQTARKSTGAKVPRKHIGSKQAHKQTPVSSSSGGVKKVHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQEFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIHLARRIRG 136
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33B_DICDI (Histone H3.3 type b OS=Dictyostelium discoideum GN=H3b PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 5.627e-54 Identity = 105/133 (78.95%), Postives = 121/133 (90.98%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTG K PRK L +K+++K+ PST G+KK HR++PGTVALREIRRYQKS+ELLI+KLPFQRLVREIAQ+FK+DLRFQ++AI ALQE+ EAYLV LFEDTNLCAIHAKRVTI KDIQLARR+RG Sbjct: 1 MARTKQTARKSTGAKVPRKHLGNKSSQKSFPSTQGLKKTHRFRPGTVALREIRRYQKSSELLIKKLPFQRLVREIAQEFKTDLRFQAAAIQALQEASEAYLVGLFEDTNLCAIHAKRVTIMVKDIQLARRIRG 133
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33C_DICDI (Histone H3.3 type c OS=Dictyostelium discoideum GN=H3c PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 5.823e-51 Identity = 101/133 (75.94%), Postives = 117/133 (87.97%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARKSTG K PRK L+SK++ + P +KK HR++PGTVALREIRRYQKS++LLI+KLPFQRLVREIAQ+FK+DLRFQ++AI ALQE+ EAYLV LFEDTNLCAIHAKRVTI KDIQLARR+RG Sbjct: 1 MARTKQTARKSTGAKVPRKHLSSKSSFPSKPVNEVLKKTHRFRPGTVALREIRRYQKSSDLLIKKLPFQRLVREIAQEFKTDLRFQAAAIEALQEATEAYLVGLFEDTNLCAIHAKRVTIMVKDIQLARRIRG 133
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3L_MOUSE (Putative histone H3-like OS=Mus musculus PE=5 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 1.098e-49 Identity = 105/133 (78.95%), Postives = 114/133 (85.71%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MA TKQTARKST GKAPRKQLA+KAA K+APSTGGVKK HRY+P TVAL EIRRY STELLI KLPFQRLV+EIAQDFK+DLRFQS+AIGALQE+ EA V LFEDTNLCAIHAK VT+ KDIQLA + G Sbjct: 1 MAHTKQTARKSTCGKAPRKQLATKAAXKSAPSTGGVKKSHRYRPDTVALLEIRRYH-STELLIHKLPFQRLVQEIAQDFKTDLRFQSAAIGALQEASEANRVGLFEDTNLCAIHAKCVTVIPKDIQLAHSILG 132
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H33L3_CAEEL (Putative histone H3.3-like type 3 OS=Caenorhabditis elegans GN=his-69 PE=5 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 7.118e-49 Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 2 Query: 80 GGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 GGKAPRKQLA+KAARK A G VKKPHR++PGTVALREIRRYQKST+LL+RKLPFQRLVREIAQD K DLRFQS+AI ALQE+ E +LV LFEDTNLCAIHAKRVTI KD+QLARR+RG Sbjct: 4 GGKAPRKQLATKAARKNAIVVGAVKKPHRFRPGTVALREIRRYQKSTDLLLRKLPFQRLVREIAQDVKQDLRFQSAAIQALQEASEYFLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRG 124
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H34_STYLE (Histone H3-4 (Fragment) OS=Stylonychia lemnae GN=H3-4 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 4.318e-46 Identity = 90/109 (82.57%), Postives = 100/109 (91.74%), Query Frame = 2 Query: 77 TGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTI 403 TG KAPRK LA+KAARK AP+ GGVKKPHR++PGTVALREIR+YQKSTELLIRKLPFQRLVREIA D+KSDLRFQSSA+ A+QE+ EAY+V LFEDTNLCAIHA RVTI Sbjct: 2 TGAKAPRKALANKAARKTAPADGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIASDYKSDLRFQSSAVAAIQEAAEAYMVGLFEDTNLCAIHAGRVTI 110
BLAST of CX297751 vs. ExPASy Swiss-Prot
Match: H3_GUITH (Histone H3 OS=Guillardia theta PE=3 SV=3) HSP 1 Score: 182.956 bits (463), Expect = 9.621e-46 Identity = 95/133 (71.43%), Postives = 110/133 (82.71%), Query Frame = 2 Query: 44 MARTKQTARKSTGGKAPRKQLASKAARKAAPSTGGVKKPHRYKPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRG 442 MARTKQTARK+ GG +++ K A+ +KK HRYKPGTVALREIR+YQKST LLIRKLPFQRLVRE+AQD+KSDLRFQ+SA+ ALQE+ E+YLV+LFEDTNLCAIHAKRVTI KDI LARR+RG Sbjct: 1 MARTKQTARKTVGGDI-NSRISEKRAKSDNSKNIDLKKVHRYKPGTVALREIRKYQKSTNLLIRKLPFQRLVRELAQDYKSDLRFQNSAVLALQEASESYLVNLFEDTNLCAIHAKRVTIMPKDIYLARRIRG 132 The following BLAST results are available for this feature:
BLAST of CX297751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297751 ID=CX297751; Name=CX297751; organism=Citrus clementina; type=EST; length=585bpback to top |